Marker-assisted pyramiding of multiple disease resistance genes in coffee genotypes (coffea arabica).

Detalhes bibliográficos
Autor(a) principal: ALMEIDA, D. P. de
Data de Publicação: 2021
Outros Autores: CAIXETA, E. T., MOREIRA, K. F., OLIVEIRA, A. C. B. de, FREITAS, K. N. P. de, PEREIRA, A. A., ROSADO, R. D. S., ZAMBOLIM, L., CRUZ, C. D.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1139360
https://doi.org/10.3390/agronomy11091763
Resumo: The use of resistant cultivars is the most effective strategy for controlling coffee leaf rust caused by the fungus Hemileia vastatrix. To assist the development of such cultivars, amplified fragment-length polymorphism (AFLP) markers linked to two loci of coffee resistance to races I and II as well as pathotype 001 of H. vastatrix were converted to sequence-characterized amplified region (SCAR) and cleaved amplified polymorphic site (CAPS) markers. In total, 2 SCAR markers and 1 CAPS marker were validated in resistant and susceptible parents as well as in 247 individuals from the F2 population. The efficiency of these markers for marker-assisted selection (MAS) was evaluated in F2:3 and backcross (BCrs2) populations genotyped with the developed markers and phenotyped with race II of H. vastatrix. The markers showed 90% efficiency in MAS. Therefore, the developed markers, together with molecular markers associated with other rust resistance genes, were used for F3:4 and BCrs3 coffee selection. The selected plants were analyzed using two markers associated with coffee berry disease (CBD) resistance, aiming for preventive breeding. MAS of F3:4 and BCrs3 individuals with all resistance loci was feasible. Our phenotypic and genotypic approaches are useful for the development of coffee genotypes with multiple genes conferring resistance to coffee leaf rust and CBD.
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spelling Marker-assisted pyramiding of multiple disease resistance genes in coffee genotypes (coffea arabica).Hemileia VastatrixPlant breedingChromosome mappingColletotrichum kahawaeThe use of resistant cultivars is the most effective strategy for controlling coffee leaf rust caused by the fungus Hemileia vastatrix. To assist the development of such cultivars, amplified fragment-length polymorphism (AFLP) markers linked to two loci of coffee resistance to races I and II as well as pathotype 001 of H. vastatrix were converted to sequence-characterized amplified region (SCAR) and cleaved amplified polymorphic site (CAPS) markers. In total, 2 SCAR markers and 1 CAPS marker were validated in resistant and susceptible parents as well as in 247 individuals from the F2 population. The efficiency of these markers for marker-assisted selection (MAS) was evaluated in F2:3 and backcross (BCrs2) populations genotyped with the developed markers and phenotyped with race II of H. vastatrix. The markers showed 90% efficiency in MAS. Therefore, the developed markers, together with molecular markers associated with other rust resistance genes, were used for F3:4 and BCrs3 coffee selection. The selected plants were analyzed using two markers associated with coffee berry disease (CBD) resistance, aiming for preventive breeding. MAS of F3:4 and BCrs3 individuals with all resistance loci was feasible. Our phenotypic and genotypic approaches are useful for the development of coffee genotypes with multiple genes conferring resistance to coffee leaf rust and CBD.DÊNIA PIRES DE ALMEIDA, UFV; EVELINE TEIXEIRA CAIXETA MOURA, CNPCa; KAROLINY FERREIRA MOREIRA, UFV; ANTONIO CARLOS BAIAO DE OLIVEIRA, CNPCa; KÁTIA NOGUEIRA PESTANA DE FREITAS, UFV; ANTÔNIO ALVES PEREIRA, EPAMIG; RENATO DOMICIANO SILVA ROSADO, UFV; LAÉRCIO ZAMBOLIM, UFV; COSME DAMIÃO CRUZ, UFV.ALMEIDA, D. P. deCAIXETA, E. T.MOREIRA, K. F.OLIVEIRA, A. C. B. deFREITAS, K. N. P. dePEREIRA, A. A.ROSADO, R. D. S.ZAMBOLIM, L.CRUZ, C. D.2022-01-27T01:59:16Z2022-01-27T01:59:16Z2022-01-262021info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleAgronomy, v. 11, n. 9, 1763, 2021.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1139360https://doi.org/10.3390/agronomy11091763enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2022-01-27T01:59:26Zoai:www.alice.cnptia.embrapa.br:doc/1139360Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542022-01-27T01:59:26falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542022-01-27T01:59:26Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Marker-assisted pyramiding of multiple disease resistance genes in coffee genotypes (coffea arabica).
title Marker-assisted pyramiding of multiple disease resistance genes in coffee genotypes (coffea arabica).
spellingShingle Marker-assisted pyramiding of multiple disease resistance genes in coffee genotypes (coffea arabica).
ALMEIDA, D. P. de
Hemileia Vastatrix
Plant breeding
Chromosome mapping
Colletotrichum kahawae
title_short Marker-assisted pyramiding of multiple disease resistance genes in coffee genotypes (coffea arabica).
title_full Marker-assisted pyramiding of multiple disease resistance genes in coffee genotypes (coffea arabica).
title_fullStr Marker-assisted pyramiding of multiple disease resistance genes in coffee genotypes (coffea arabica).
title_full_unstemmed Marker-assisted pyramiding of multiple disease resistance genes in coffee genotypes (coffea arabica).
title_sort Marker-assisted pyramiding of multiple disease resistance genes in coffee genotypes (coffea arabica).
author ALMEIDA, D. P. de
author_facet ALMEIDA, D. P. de
CAIXETA, E. T.
MOREIRA, K. F.
OLIVEIRA, A. C. B. de
FREITAS, K. N. P. de
PEREIRA, A. A.
ROSADO, R. D. S.
ZAMBOLIM, L.
CRUZ, C. D.
author_role author
author2 CAIXETA, E. T.
MOREIRA, K. F.
OLIVEIRA, A. C. B. de
FREITAS, K. N. P. de
PEREIRA, A. A.
ROSADO, R. D. S.
ZAMBOLIM, L.
CRUZ, C. D.
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv DÊNIA PIRES DE ALMEIDA, UFV; EVELINE TEIXEIRA CAIXETA MOURA, CNPCa; KAROLINY FERREIRA MOREIRA, UFV; ANTONIO CARLOS BAIAO DE OLIVEIRA, CNPCa; KÁTIA NOGUEIRA PESTANA DE FREITAS, UFV; ANTÔNIO ALVES PEREIRA, EPAMIG; RENATO DOMICIANO SILVA ROSADO, UFV; LAÉRCIO ZAMBOLIM, UFV; COSME DAMIÃO CRUZ, UFV.
dc.contributor.author.fl_str_mv ALMEIDA, D. P. de
CAIXETA, E. T.
MOREIRA, K. F.
OLIVEIRA, A. C. B. de
FREITAS, K. N. P. de
PEREIRA, A. A.
ROSADO, R. D. S.
ZAMBOLIM, L.
CRUZ, C. D.
dc.subject.por.fl_str_mv Hemileia Vastatrix
Plant breeding
Chromosome mapping
Colletotrichum kahawae
topic Hemileia Vastatrix
Plant breeding
Chromosome mapping
Colletotrichum kahawae
description The use of resistant cultivars is the most effective strategy for controlling coffee leaf rust caused by the fungus Hemileia vastatrix. To assist the development of such cultivars, amplified fragment-length polymorphism (AFLP) markers linked to two loci of coffee resistance to races I and II as well as pathotype 001 of H. vastatrix were converted to sequence-characterized amplified region (SCAR) and cleaved amplified polymorphic site (CAPS) markers. In total, 2 SCAR markers and 1 CAPS marker were validated in resistant and susceptible parents as well as in 247 individuals from the F2 population. The efficiency of these markers for marker-assisted selection (MAS) was evaluated in F2:3 and backcross (BCrs2) populations genotyped with the developed markers and phenotyped with race II of H. vastatrix. The markers showed 90% efficiency in MAS. Therefore, the developed markers, together with molecular markers associated with other rust resistance genes, were used for F3:4 and BCrs3 coffee selection. The selected plants were analyzed using two markers associated with coffee berry disease (CBD) resistance, aiming for preventive breeding. MAS of F3:4 and BCrs3 individuals with all resistance loci was feasible. Our phenotypic and genotypic approaches are useful for the development of coffee genotypes with multiple genes conferring resistance to coffee leaf rust and CBD.
publishDate 2021
dc.date.none.fl_str_mv 2021
2022-01-27T01:59:16Z
2022-01-27T01:59:16Z
2022-01-26
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Agronomy, v. 11, n. 9, 1763, 2021.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1139360
https://doi.org/10.3390/agronomy11091763
identifier_str_mv Agronomy, v. 11, n. 9, 1763, 2021.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1139360
https://doi.org/10.3390/agronomy11091763
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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