Phenotypic and molecular characterization of sweet sorghum accessions for bioenergy production.

Detalhes bibliográficos
Autor(a) principal: SILVA, M. J. da
Data de Publicação: 2017
Outros Autores: PASTINA, M. M., SOUZA, V. F. de, SCHAFFERT, R. E., CARNEIRO, P. C. S., NODA, R. W., CARNEIRO, J. E. de S., DAMASCENO, C. M. B., PARRELLA, R. A. da C.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1074429
Resumo: Sweet sorghum [Sorghum bicolor (L.) Moench] is a type of cultivated sorghum characterized by the accumulation of high levels of sugar in the stems and high biomass accumulation, making this crop an important feedstock for bioenergy production. Sweet sorghum breeding programs that focus on bioenergy have two main goals: to improve quantity and quality of sugars in the juicy stem and to increase fresh biomass productivity. Genetic diversity studies are very important for the success of a breeding program, especially in the early stages, where understanding the genetic relationship between accessions is essential to identify superior parents for the development of improved breeding lines. The objectives of this study were: to perform phenotypic and molecular characterization of 100 sweet sorghum accessions from the germplasm bank of the Embrapa Maize and Sorghum breeding program; to examine the relationship between the phenotypic and the molecular diversity matrices; and to infer about the population structure in the sweet sorghum accessions. Morphological and agro-industrial traits related to sugar and biomass production were used for phenotypic characterization, and single nucleotide polymorphisms (SNPs) were used for molecular diversity analysis. Both phenotypic and molecular characterizations revealed the existence of considerable genetic diversity among the 100 sweet sorghum accessions. The correlation between the phenotypic and the molecular diversity matrices was low (0.35), which is in agreement with the inconsistencies observed between the clusters formed by the phenotypic and the molecular diversity analyses. Furthermore, the clusters obtained by the molecular diversity analysis were more consistent with the genealogy and the historic background of the sweet sorghum accessions than the clusters obtained through the phenotypic diversity analysis. The low correlation observed between the molecular and the phenotypic diversity matrices highlights the complementarity between the molecular and the phenotypic characterization to assist a breeding program.
id EMBR_969ba1e85d324121ef29fb2e138fd3c9
oai_identifier_str oai:www.alice.cnptia.embrapa.br:doc/1074429
network_acronym_str EMBR
network_name_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository_id_str 2154
spelling Phenotypic and molecular characterization of sweet sorghum accessions for bioenergy production.Seleção fenotípicaSorgo açucareiroBioenergiaSweet sorghum [Sorghum bicolor (L.) Moench] is a type of cultivated sorghum characterized by the accumulation of high levels of sugar in the stems and high biomass accumulation, making this crop an important feedstock for bioenergy production. Sweet sorghum breeding programs that focus on bioenergy have two main goals: to improve quantity and quality of sugars in the juicy stem and to increase fresh biomass productivity. Genetic diversity studies are very important for the success of a breeding program, especially in the early stages, where understanding the genetic relationship between accessions is essential to identify superior parents for the development of improved breeding lines. The objectives of this study were: to perform phenotypic and molecular characterization of 100 sweet sorghum accessions from the germplasm bank of the Embrapa Maize and Sorghum breeding program; to examine the relationship between the phenotypic and the molecular diversity matrices; and to infer about the population structure in the sweet sorghum accessions. Morphological and agro-industrial traits related to sugar and biomass production were used for phenotypic characterization, and single nucleotide polymorphisms (SNPs) were used for molecular diversity analysis. Both phenotypic and molecular characterizations revealed the existence of considerable genetic diversity among the 100 sweet sorghum accessions. The correlation between the phenotypic and the molecular diversity matrices was low (0.35), which is in agreement with the inconsistencies observed between the clusters formed by the phenotypic and the molecular diversity analyses. Furthermore, the clusters obtained by the molecular diversity analysis were more consistent with the genealogy and the historic background of the sweet sorghum accessions than the clusters obtained through the phenotypic diversity analysis. The low correlation observed between the molecular and the phenotypic diversity matrices highlights the complementarity between the molecular and the phenotypic characterization to assist a breeding program.Michele Jorge da Silva, Bolsista; MARIA MARTA PASTINA, CNPMS; Vander Fillipe de Souza, Bolsista; ROBERT EUGENE SCHAFFERT, CNPMS; Pedro Crescêncio Souza Carneiro, Bolsista; ROBERTO WILLIANS NODA, CNPMS; José Eustáquio de Souza Carneiro; CYNTHIA MARIA BORGES DAMASCENO, CNPMS; RAFAEL AUGUSTO DA COSTA PARRELLA, CNPMS.SILVA, M. J. daPASTINA, M. M.SOUZA, V. F. deSCHAFFERT, R. E.CARNEIRO, P. C. S.NODA, R. W.CARNEIRO, J. E. de S.DAMASCENO, C. M. B.PARRELLA, R. A. da C.2017-08-25T19:13:00Z2017-08-25T19:13:00Z2017-08-2420172017-08-25T19:13:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlePlos One, San Francisco, v. 12, n. 8, p. 1-19, 2017.http://www.alice.cnptia.embrapa.br/alice/handle/doc/107442910.1371/journal.pone.0183504enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-26T04:03:39Zoai:www.alice.cnptia.embrapa.br:doc/1074429Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-26T04:03:39falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-26T04:03:39Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Phenotypic and molecular characterization of sweet sorghum accessions for bioenergy production.
title Phenotypic and molecular characterization of sweet sorghum accessions for bioenergy production.
spellingShingle Phenotypic and molecular characterization of sweet sorghum accessions for bioenergy production.
SILVA, M. J. da
Seleção fenotípica
Sorgo açucareiro
Bioenergia
title_short Phenotypic and molecular characterization of sweet sorghum accessions for bioenergy production.
title_full Phenotypic and molecular characterization of sweet sorghum accessions for bioenergy production.
title_fullStr Phenotypic and molecular characterization of sweet sorghum accessions for bioenergy production.
title_full_unstemmed Phenotypic and molecular characterization of sweet sorghum accessions for bioenergy production.
title_sort Phenotypic and molecular characterization of sweet sorghum accessions for bioenergy production.
author SILVA, M. J. da
author_facet SILVA, M. J. da
PASTINA, M. M.
SOUZA, V. F. de
SCHAFFERT, R. E.
CARNEIRO, P. C. S.
NODA, R. W.
CARNEIRO, J. E. de S.
DAMASCENO, C. M. B.
PARRELLA, R. A. da C.
author_role author
author2 PASTINA, M. M.
SOUZA, V. F. de
SCHAFFERT, R. E.
CARNEIRO, P. C. S.
NODA, R. W.
CARNEIRO, J. E. de S.
DAMASCENO, C. M. B.
PARRELLA, R. A. da C.
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Michele Jorge da Silva, Bolsista; MARIA MARTA PASTINA, CNPMS; Vander Fillipe de Souza, Bolsista; ROBERT EUGENE SCHAFFERT, CNPMS; Pedro Crescêncio Souza Carneiro, Bolsista; ROBERTO WILLIANS NODA, CNPMS; José Eustáquio de Souza Carneiro; CYNTHIA MARIA BORGES DAMASCENO, CNPMS; RAFAEL AUGUSTO DA COSTA PARRELLA, CNPMS.
dc.contributor.author.fl_str_mv SILVA, M. J. da
PASTINA, M. M.
SOUZA, V. F. de
SCHAFFERT, R. E.
CARNEIRO, P. C. S.
NODA, R. W.
CARNEIRO, J. E. de S.
DAMASCENO, C. M. B.
PARRELLA, R. A. da C.
dc.subject.por.fl_str_mv Seleção fenotípica
Sorgo açucareiro
Bioenergia
topic Seleção fenotípica
Sorgo açucareiro
Bioenergia
description Sweet sorghum [Sorghum bicolor (L.) Moench] is a type of cultivated sorghum characterized by the accumulation of high levels of sugar in the stems and high biomass accumulation, making this crop an important feedstock for bioenergy production. Sweet sorghum breeding programs that focus on bioenergy have two main goals: to improve quantity and quality of sugars in the juicy stem and to increase fresh biomass productivity. Genetic diversity studies are very important for the success of a breeding program, especially in the early stages, where understanding the genetic relationship between accessions is essential to identify superior parents for the development of improved breeding lines. The objectives of this study were: to perform phenotypic and molecular characterization of 100 sweet sorghum accessions from the germplasm bank of the Embrapa Maize and Sorghum breeding program; to examine the relationship between the phenotypic and the molecular diversity matrices; and to infer about the population structure in the sweet sorghum accessions. Morphological and agro-industrial traits related to sugar and biomass production were used for phenotypic characterization, and single nucleotide polymorphisms (SNPs) were used for molecular diversity analysis. Both phenotypic and molecular characterizations revealed the existence of considerable genetic diversity among the 100 sweet sorghum accessions. The correlation between the phenotypic and the molecular diversity matrices was low (0.35), which is in agreement with the inconsistencies observed between the clusters formed by the phenotypic and the molecular diversity analyses. Furthermore, the clusters obtained by the molecular diversity analysis were more consistent with the genealogy and the historic background of the sweet sorghum accessions than the clusters obtained through the phenotypic diversity analysis. The low correlation observed between the molecular and the phenotypic diversity matrices highlights the complementarity between the molecular and the phenotypic characterization to assist a breeding program.
publishDate 2017
dc.date.none.fl_str_mv 2017-08-25T19:13:00Z
2017-08-25T19:13:00Z
2017-08-24
2017
2017-08-25T19:13:00Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Plos One, San Francisco, v. 12, n. 8, p. 1-19, 2017.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1074429
10.1371/journal.pone.0183504
identifier_str_mv Plos One, San Francisco, v. 12, n. 8, p. 1-19, 2017.
10.1371/journal.pone.0183504
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1074429
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
_version_ 1794503441575313408