QTL mapping for bioenergy traits in sweet sorghum recombinant inbred lines.
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/1135489 https://doi.org/10.1093/g3journal/jkab314 |
Resumo: | During the past decade, sweet sorghum (Sorghum bicolor Moench L.) has shown great potential for bioenergy production, especially biofuels. In this study, 223 recombinant inbred lines (RILs) derived from a cross between two sweet sorghum lines (Brandes Wray) were evaluated in three trials. Single-nucleotide polymorphisms (SNPs) derived from genotyping by sequencing of 272 RILs were used to build a high-density genetic map comprising 3,767 SNPs spanning 1,368.83 cM. Multitrait multiple interval mapping (MT-MIM) was carried out to map quantitative trait loci (QTL) for eight bioenergy traits. A total of 33 QTLs were identified for flowering time, plant height, total soluble solids and sucrose (five QTLs each), fibers (four QTLs), and fresh biomass yield, juice extraction yield, and reducing sugars (three QTLs each). QTL hotspots were found on chromosomes 1, 3, 6, 9, and 10, in addition to other QTLs detected on chromosomes 4 and 8. We observed that 14 out of the 33 mapped QTLs were found in all three trials. Upon further development and validation in other crosses, the results provided by the present study have a great potential to be used in marker-assisted selection in sorghum breeding programs for biofuel production. |
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QTL mapping for bioenergy traits in sweet sorghum recombinant inbred lines.Sorghum BicolorSorgo AçucareiroBioenergiaLinhagemBioethanolQuantitative trait lociDuring the past decade, sweet sorghum (Sorghum bicolor Moench L.) has shown great potential for bioenergy production, especially biofuels. In this study, 223 recombinant inbred lines (RILs) derived from a cross between two sweet sorghum lines (Brandes Wray) were evaluated in three trials. Single-nucleotide polymorphisms (SNPs) derived from genotyping by sequencing of 272 RILs were used to build a high-density genetic map comprising 3,767 SNPs spanning 1,368.83 cM. Multitrait multiple interval mapping (MT-MIM) was carried out to map quantitative trait loci (QTL) for eight bioenergy traits. A total of 33 QTLs were identified for flowering time, plant height, total soluble solids and sucrose (five QTLs each), fibers (four QTLs), and fresh biomass yield, juice extraction yield, and reducing sugars (three QTLs each). QTL hotspots were found on chromosomes 1, 3, 6, 9, and 10, in addition to other QTLs detected on chromosomes 4 and 8. We observed that 14 out of the 33 mapped QTLs were found in all three trials. Upon further development and validation in other crosses, the results provided by the present study have a great potential to be used in marker-assisted selection in sorghum breeding programs for biofuel production.VANDER FILLIPE DE SOUZA; GUILHERME DA SILVA PEREIRA, Escola Superior de Agricultura "Luiz de Queiroz"; MARIA MARTA PASTINA, CNPMS; RAFAEL AUGUSTO DA COSTA PARRELLA, CNPMS; MARIA LUCIA FERREIRA SIMEONE, CNPMS; BEATRIZ DE ALMEIDA BARROS, CNPMS; ROBERTO WILLIANS NODA, CNPMS; LUCIANO DA COSTA E SILVA, Universidade Federal de Viçosa; JURANDIR VIEIRA DE MAGALHAES, CNPMS; ROBERT EUGENE SCHAFFERT, CNPMS; ANTONIO AUGUSTO FRANCO GARCIA, Escola Superior de Agricultura "Luiz de Queiroz"; CYNTHIA MARIA BORGES DAMASCENO, CNPMS.SOUZA, V. F. dePEREIRA, G. da S.PASTINA, M. M.PARRELLA, R. A. da C.SIMEONE, M. L. F.BARROS, B. de A.NODA, R. W.SILVA, L. da C. eMAGALHAES, J. V. deSCHAFFERT, R. E.GARCIA, A. A. F.DAMASCENO, C. M. B.2021-10-22T12:00:59Z2021-10-22T12:00:59Z2021-10-222021info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleG3: Genes, Genomes, Genetics, v. 11, 112021, 2021.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1135489https://doi.org/10.1093/g3journal/jkab314enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2021-10-22T12:01:08Zoai:www.alice.cnptia.embrapa.br:doc/1135489Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542021-10-22T12:01:08falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542021-10-22T12:01:08Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
QTL mapping for bioenergy traits in sweet sorghum recombinant inbred lines. |
title |
QTL mapping for bioenergy traits in sweet sorghum recombinant inbred lines. |
spellingShingle |
QTL mapping for bioenergy traits in sweet sorghum recombinant inbred lines. SOUZA, V. F. de Sorghum Bicolor Sorgo Açucareiro Bioenergia Linhagem Bioethanol Quantitative trait loci |
title_short |
QTL mapping for bioenergy traits in sweet sorghum recombinant inbred lines. |
title_full |
QTL mapping for bioenergy traits in sweet sorghum recombinant inbred lines. |
title_fullStr |
QTL mapping for bioenergy traits in sweet sorghum recombinant inbred lines. |
title_full_unstemmed |
QTL mapping for bioenergy traits in sweet sorghum recombinant inbred lines. |
title_sort |
QTL mapping for bioenergy traits in sweet sorghum recombinant inbred lines. |
author |
SOUZA, V. F. de |
author_facet |
SOUZA, V. F. de PEREIRA, G. da S. PASTINA, M. M. PARRELLA, R. A. da C. SIMEONE, M. L. F. BARROS, B. de A. NODA, R. W. SILVA, L. da C. e MAGALHAES, J. V. de SCHAFFERT, R. E. GARCIA, A. A. F. DAMASCENO, C. M. B. |
author_role |
author |
author2 |
PEREIRA, G. da S. PASTINA, M. M. PARRELLA, R. A. da C. SIMEONE, M. L. F. BARROS, B. de A. NODA, R. W. SILVA, L. da C. e MAGALHAES, J. V. de SCHAFFERT, R. E. GARCIA, A. A. F. DAMASCENO, C. M. B. |
author2_role |
author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
VANDER FILLIPE DE SOUZA; GUILHERME DA SILVA PEREIRA, Escola Superior de Agricultura "Luiz de Queiroz"; MARIA MARTA PASTINA, CNPMS; RAFAEL AUGUSTO DA COSTA PARRELLA, CNPMS; MARIA LUCIA FERREIRA SIMEONE, CNPMS; BEATRIZ DE ALMEIDA BARROS, CNPMS; ROBERTO WILLIANS NODA, CNPMS; LUCIANO DA COSTA E SILVA, Universidade Federal de Viçosa; JURANDIR VIEIRA DE MAGALHAES, CNPMS; ROBERT EUGENE SCHAFFERT, CNPMS; ANTONIO AUGUSTO FRANCO GARCIA, Escola Superior de Agricultura "Luiz de Queiroz"; CYNTHIA MARIA BORGES DAMASCENO, CNPMS. |
dc.contributor.author.fl_str_mv |
SOUZA, V. F. de PEREIRA, G. da S. PASTINA, M. M. PARRELLA, R. A. da C. SIMEONE, M. L. F. BARROS, B. de A. NODA, R. W. SILVA, L. da C. e MAGALHAES, J. V. de SCHAFFERT, R. E. GARCIA, A. A. F. DAMASCENO, C. M. B. |
dc.subject.por.fl_str_mv |
Sorghum Bicolor Sorgo Açucareiro Bioenergia Linhagem Bioethanol Quantitative trait loci |
topic |
Sorghum Bicolor Sorgo Açucareiro Bioenergia Linhagem Bioethanol Quantitative trait loci |
description |
During the past decade, sweet sorghum (Sorghum bicolor Moench L.) has shown great potential for bioenergy production, especially biofuels. In this study, 223 recombinant inbred lines (RILs) derived from a cross between two sweet sorghum lines (Brandes Wray) were evaluated in three trials. Single-nucleotide polymorphisms (SNPs) derived from genotyping by sequencing of 272 RILs were used to build a high-density genetic map comprising 3,767 SNPs spanning 1,368.83 cM. Multitrait multiple interval mapping (MT-MIM) was carried out to map quantitative trait loci (QTL) for eight bioenergy traits. A total of 33 QTLs were identified for flowering time, plant height, total soluble solids and sucrose (five QTLs each), fibers (four QTLs), and fresh biomass yield, juice extraction yield, and reducing sugars (three QTLs each). QTL hotspots were found on chromosomes 1, 3, 6, 9, and 10, in addition to other QTLs detected on chromosomes 4 and 8. We observed that 14 out of the 33 mapped QTLs were found in all three trials. Upon further development and validation in other crosses, the results provided by the present study have a great potential to be used in marker-assisted selection in sorghum breeding programs for biofuel production. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-10-22T12:00:59Z 2021-10-22T12:00:59Z 2021-10-22 2021 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/publishedVersion info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
G3: Genes, Genomes, Genetics, v. 11, 112021, 2021. http://www.alice.cnptia.embrapa.br/alice/handle/doc/1135489 https://doi.org/10.1093/g3journal/jkab314 |
identifier_str_mv |
G3: Genes, Genomes, Genetics, v. 11, 112021, 2021. |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1135489 https://doi.org/10.1093/g3journal/jkab314 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
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Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
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EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
collection |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository.name.fl_str_mv |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
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1794503510896672768 |