QTL mapping for bioenergy traits in sweet sorghum recombinant inbred lines.

Detalhes bibliográficos
Autor(a) principal: SOUZA, V. F. de
Data de Publicação: 2021
Outros Autores: PEREIRA, G. da S., PASTINA, M. M., PARRELLA, R. A. da C., SIMEONE, M. L. F., BARROS, B. de A., NODA, R. W., SILVA, L. da C. e, MAGALHAES, J. V. de, SCHAFFERT, R. E., GARCIA, A. A. F., DAMASCENO, C. M. B.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1135489
https://doi.org/10.1093/g3journal/jkab314
Resumo: During the past decade, sweet sorghum (Sorghum bicolor Moench L.) has shown great potential for bioenergy production, especially biofuels. In this study, 223 recombinant inbred lines (RILs) derived from a cross between two sweet sorghum lines (Brandes Wray) were evaluated in three trials. Single-nucleotide polymorphisms (SNPs) derived from genotyping by sequencing of 272 RILs were used to build a high-density genetic map comprising 3,767 SNPs spanning 1,368.83 cM. Multitrait multiple interval mapping (MT-MIM) was carried out to map quantitative trait loci (QTL) for eight bioenergy traits. A total of 33 QTLs were identified for flowering time, plant height, total soluble solids and sucrose (five QTLs each), fibers (four QTLs), and fresh biomass yield, juice extraction yield, and reducing sugars (three QTLs each). QTL hotspots were found on chromosomes 1, 3, 6, 9, and 10, in addition to other QTLs detected on chromosomes 4 and 8. We observed that 14 out of the 33 mapped QTLs were found in all three trials. Upon further development and validation in other crosses, the results provided by the present study have a great potential to be used in marker-assisted selection in sorghum breeding programs for biofuel production.
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spelling QTL mapping for bioenergy traits in sweet sorghum recombinant inbred lines.Sorghum BicolorSorgo AçucareiroBioenergiaLinhagemBioethanolQuantitative trait lociDuring the past decade, sweet sorghum (Sorghum bicolor Moench L.) has shown great potential for bioenergy production, especially biofuels. In this study, 223 recombinant inbred lines (RILs) derived from a cross between two sweet sorghum lines (Brandes Wray) were evaluated in three trials. Single-nucleotide polymorphisms (SNPs) derived from genotyping by sequencing of 272 RILs were used to build a high-density genetic map comprising 3,767 SNPs spanning 1,368.83 cM. Multitrait multiple interval mapping (MT-MIM) was carried out to map quantitative trait loci (QTL) for eight bioenergy traits. A total of 33 QTLs were identified for flowering time, plant height, total soluble solids and sucrose (five QTLs each), fibers (four QTLs), and fresh biomass yield, juice extraction yield, and reducing sugars (three QTLs each). QTL hotspots were found on chromosomes 1, 3, 6, 9, and 10, in addition to other QTLs detected on chromosomes 4 and 8. We observed that 14 out of the 33 mapped QTLs were found in all three trials. Upon further development and validation in other crosses, the results provided by the present study have a great potential to be used in marker-assisted selection in sorghum breeding programs for biofuel production.VANDER FILLIPE DE SOUZA; GUILHERME DA SILVA PEREIRA, Escola Superior de Agricultura "Luiz de Queiroz"; MARIA MARTA PASTINA, CNPMS; RAFAEL AUGUSTO DA COSTA PARRELLA, CNPMS; MARIA LUCIA FERREIRA SIMEONE, CNPMS; BEATRIZ DE ALMEIDA BARROS, CNPMS; ROBERTO WILLIANS NODA, CNPMS; LUCIANO DA COSTA E SILVA, Universidade Federal de Viçosa; JURANDIR VIEIRA DE MAGALHAES, CNPMS; ROBERT EUGENE SCHAFFERT, CNPMS; ANTONIO AUGUSTO FRANCO GARCIA, Escola Superior de Agricultura "Luiz de Queiroz"; CYNTHIA MARIA BORGES DAMASCENO, CNPMS.SOUZA, V. F. dePEREIRA, G. da S.PASTINA, M. M.PARRELLA, R. A. da C.SIMEONE, M. L. F.BARROS, B. de A.NODA, R. W.SILVA, L. da C. eMAGALHAES, J. V. deSCHAFFERT, R. E.GARCIA, A. A. F.DAMASCENO, C. M. B.2021-10-22T12:00:59Z2021-10-22T12:00:59Z2021-10-222021info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleG3: Genes, Genomes, Genetics, v. 11, 112021, 2021.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1135489https://doi.org/10.1093/g3journal/jkab314enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2021-10-22T12:01:08Zoai:www.alice.cnptia.embrapa.br:doc/1135489Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542021-10-22T12:01:08falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542021-10-22T12:01:08Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv QTL mapping for bioenergy traits in sweet sorghum recombinant inbred lines.
title QTL mapping for bioenergy traits in sweet sorghum recombinant inbred lines.
spellingShingle QTL mapping for bioenergy traits in sweet sorghum recombinant inbred lines.
SOUZA, V. F. de
Sorghum Bicolor
Sorgo Açucareiro
Bioenergia
Linhagem
Bioethanol
Quantitative trait loci
title_short QTL mapping for bioenergy traits in sweet sorghum recombinant inbred lines.
title_full QTL mapping for bioenergy traits in sweet sorghum recombinant inbred lines.
title_fullStr QTL mapping for bioenergy traits in sweet sorghum recombinant inbred lines.
title_full_unstemmed QTL mapping for bioenergy traits in sweet sorghum recombinant inbred lines.
title_sort QTL mapping for bioenergy traits in sweet sorghum recombinant inbred lines.
author SOUZA, V. F. de
author_facet SOUZA, V. F. de
PEREIRA, G. da S.
PASTINA, M. M.
PARRELLA, R. A. da C.
SIMEONE, M. L. F.
BARROS, B. de A.
NODA, R. W.
SILVA, L. da C. e
MAGALHAES, J. V. de
SCHAFFERT, R. E.
GARCIA, A. A. F.
DAMASCENO, C. M. B.
author_role author
author2 PEREIRA, G. da S.
PASTINA, M. M.
PARRELLA, R. A. da C.
SIMEONE, M. L. F.
BARROS, B. de A.
NODA, R. W.
SILVA, L. da C. e
MAGALHAES, J. V. de
SCHAFFERT, R. E.
GARCIA, A. A. F.
DAMASCENO, C. M. B.
author2_role author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv VANDER FILLIPE DE SOUZA; GUILHERME DA SILVA PEREIRA, Escola Superior de Agricultura "Luiz de Queiroz"; MARIA MARTA PASTINA, CNPMS; RAFAEL AUGUSTO DA COSTA PARRELLA, CNPMS; MARIA LUCIA FERREIRA SIMEONE, CNPMS; BEATRIZ DE ALMEIDA BARROS, CNPMS; ROBERTO WILLIANS NODA, CNPMS; LUCIANO DA COSTA E SILVA, Universidade Federal de Viçosa; JURANDIR VIEIRA DE MAGALHAES, CNPMS; ROBERT EUGENE SCHAFFERT, CNPMS; ANTONIO AUGUSTO FRANCO GARCIA, Escola Superior de Agricultura "Luiz de Queiroz"; CYNTHIA MARIA BORGES DAMASCENO, CNPMS.
dc.contributor.author.fl_str_mv SOUZA, V. F. de
PEREIRA, G. da S.
PASTINA, M. M.
PARRELLA, R. A. da C.
SIMEONE, M. L. F.
BARROS, B. de A.
NODA, R. W.
SILVA, L. da C. e
MAGALHAES, J. V. de
SCHAFFERT, R. E.
GARCIA, A. A. F.
DAMASCENO, C. M. B.
dc.subject.por.fl_str_mv Sorghum Bicolor
Sorgo Açucareiro
Bioenergia
Linhagem
Bioethanol
Quantitative trait loci
topic Sorghum Bicolor
Sorgo Açucareiro
Bioenergia
Linhagem
Bioethanol
Quantitative trait loci
description During the past decade, sweet sorghum (Sorghum bicolor Moench L.) has shown great potential for bioenergy production, especially biofuels. In this study, 223 recombinant inbred lines (RILs) derived from a cross between two sweet sorghum lines (Brandes Wray) were evaluated in three trials. Single-nucleotide polymorphisms (SNPs) derived from genotyping by sequencing of 272 RILs were used to build a high-density genetic map comprising 3,767 SNPs spanning 1,368.83 cM. Multitrait multiple interval mapping (MT-MIM) was carried out to map quantitative trait loci (QTL) for eight bioenergy traits. A total of 33 QTLs were identified for flowering time, plant height, total soluble solids and sucrose (five QTLs each), fibers (four QTLs), and fresh biomass yield, juice extraction yield, and reducing sugars (three QTLs each). QTL hotspots were found on chromosomes 1, 3, 6, 9, and 10, in addition to other QTLs detected on chromosomes 4 and 8. We observed that 14 out of the 33 mapped QTLs were found in all three trials. Upon further development and validation in other crosses, the results provided by the present study have a great potential to be used in marker-assisted selection in sorghum breeding programs for biofuel production.
publishDate 2021
dc.date.none.fl_str_mv 2021-10-22T12:00:59Z
2021-10-22T12:00:59Z
2021-10-22
2021
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv G3: Genes, Genomes, Genetics, v. 11, 112021, 2021.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1135489
https://doi.org/10.1093/g3journal/jkab314
identifier_str_mv G3: Genes, Genomes, Genetics, v. 11, 112021, 2021.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1135489
https://doi.org/10.1093/g3journal/jkab314
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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