Transferability of heterologous microsatellite loci between species of Euterpe genus.
Autor(a) principal: | |
---|---|
Data de Publicação: | 2017 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | por |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/1079268 |
Resumo: | Euterpe precatoria, popularly known as "açaí-do-amazonas", has agronomic, technological and economic potential and has been gaining prominence with the commercialization of its fruits. The production of this açaí-do-amazonas is based on extractivism and management practices have been recommended for sustainable collection. To recommend sustainable rates of fruit collection, it is essential to have information on the genetic variability of natural populations to monitor the recruitment and population dynamics. The objective of this study was to evaluate the transferability of microsatellite loci of E. edulis species to E. precatoria to confirm the applicability of these markers in genetic studies. Eighteen microsatellite loci developed for E. edulis were analyzed using 20 individuals from two natural populations (Formoso and Novo Segredo) of E. precatoria collected at Feijó, State of Acre, Brazil. All loci (100%) were amplified, and of these, nine (50%) were polymorphic. A total of 29 alleles were found in the Novo Segredo population, and 27 alleles were found in the Formoso population, ranging from two to five alleles per locus, with a mean of three alleles per locus. The expected heterozygosity in the Formoso population varied from 0.100 to 0.668, with an average of 0.421. In the Novo Segredo population, a variation between 0.100 and 0.710, with a mean of 0.418, was found. The observed heterozygosity values ranged from 0.100 to 0.800, with averages of 0.333 and 0.267 for Formoso and Novo Segredo, respectively. This set of markers will support further studies on the molecular characterization of the natural populations of E. precatoria and assist with the recommendation of sustainable management practices and strategies for the conservation and genetic improvement of this species. |
id |
EMBR_986aa850df8b5d33b4f2b93448646a16 |
---|---|
oai_identifier_str |
oai:www.alice.cnptia.embrapa.br:doc/1079268 |
network_acronym_str |
EMBR |
network_name_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository_id_str |
2154 |
spelling |
Transferability of heterologous microsatellite loci between species of Euterpe genus.Western AmazonMarcador microssatéliteTransferibilidadeTransferabilityTransferibilidadFormosoNovo SegredoFeijó (AC)AcreDinámica poblacionalAmazonia OcidentalVariación genéticaEnsayos de variedadesFitomejoramientoRepeticiones de microsatéliteMelhoramento genético vegetalDinâmica populacionalMarcador molecularAçaíVariedadeVariação GenéticaGenetic variationVariety trialsEuterpe precatoriaPlant breedingMicrosatellite repeatsPopulation dynamicsLociEuterpe precatoria, popularly known as "açaí-do-amazonas", has agronomic, technological and economic potential and has been gaining prominence with the commercialization of its fruits. The production of this açaí-do-amazonas is based on extractivism and management practices have been recommended for sustainable collection. To recommend sustainable rates of fruit collection, it is essential to have information on the genetic variability of natural populations to monitor the recruitment and population dynamics. The objective of this study was to evaluate the transferability of microsatellite loci of E. edulis species to E. precatoria to confirm the applicability of these markers in genetic studies. Eighteen microsatellite loci developed for E. edulis were analyzed using 20 individuals from two natural populations (Formoso and Novo Segredo) of E. precatoria collected at Feijó, State of Acre, Brazil. All loci (100%) were amplified, and of these, nine (50%) were polymorphic. A total of 29 alleles were found in the Novo Segredo population, and 27 alleles were found in the Formoso population, ranging from two to five alleles per locus, with a mean of three alleles per locus. The expected heterozygosity in the Formoso population varied from 0.100 to 0.668, with an average of 0.421. In the Novo Segredo population, a variation between 0.100 and 0.710, with a mean of 0.418, was found. The observed heterozygosity values ranged from 0.100 to 0.800, with averages of 0.333 and 0.267 for Formoso and Novo Segredo, respectively. This set of markers will support further studies on the molecular characterization of the natural populations of E. precatoria and assist with the recommendation of sustainable management practices and strategies for the conservation and genetic improvement of this species.Hellens Freires Azêvedo, Fundação Oswaldo Cruz; Universidade Federal do Acre (Ufac); Universidade Federal do Acre (Ufac); MOACIR HAVERROTH, CPAF-Acre; LUCIA HELENA DE OLIVEIRA WADT, CPAF-Rondonia; TATIANA DE CAMPOS, CPAF-Acre.AZÊVEDO, H. F.BENVINDO, F. D.CAVALCANTE, L. N.HAVERROTH, M.WADT, L. H. de O.CAMPOS, T. de2017-11-08T23:30:27Z2017-11-08T23:30:27Z2017-11-0820172017-11-13T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Research, Ribeirão Preto, v. 16, n. 4, p. 1-7, 2017.1676-5680http://www.alice.cnptia.embrapa.br/alice/handle/doc/1079268porinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-11-08T23:30:34Zoai:www.alice.cnptia.embrapa.br:doc/1079268Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-11-08T23:30:34Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Transferability of heterologous microsatellite loci between species of Euterpe genus. |
title |
Transferability of heterologous microsatellite loci between species of Euterpe genus. |
spellingShingle |
Transferability of heterologous microsatellite loci between species of Euterpe genus. AZÊVEDO, H. F. Western Amazon Marcador microssatélite Transferibilidade Transferability Transferibilidad Formoso Novo Segredo Feijó (AC) Acre Dinámica poblacional Amazonia Ocidental Variación genética Ensayos de variedades Fitomejoramiento Repeticiones de microsatélite Melhoramento genético vegetal Dinâmica populacional Marcador molecular Açaí Variedade Variação Genética Genetic variation Variety trials Euterpe precatoria Plant breeding Microsatellite repeats Population dynamics Loci |
title_short |
Transferability of heterologous microsatellite loci between species of Euterpe genus. |
title_full |
Transferability of heterologous microsatellite loci between species of Euterpe genus. |
title_fullStr |
Transferability of heterologous microsatellite loci between species of Euterpe genus. |
title_full_unstemmed |
Transferability of heterologous microsatellite loci between species of Euterpe genus. |
title_sort |
Transferability of heterologous microsatellite loci between species of Euterpe genus. |
author |
AZÊVEDO, H. F. |
author_facet |
AZÊVEDO, H. F. BENVINDO, F. D. CAVALCANTE, L. N. HAVERROTH, M. WADT, L. H. de O. CAMPOS, T. de |
author_role |
author |
author2 |
BENVINDO, F. D. CAVALCANTE, L. N. HAVERROTH, M. WADT, L. H. de O. CAMPOS, T. de |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
Hellens Freires Azêvedo, Fundação Oswaldo Cruz; Universidade Federal do Acre (Ufac); Universidade Federal do Acre (Ufac); MOACIR HAVERROTH, CPAF-Acre; LUCIA HELENA DE OLIVEIRA WADT, CPAF-Rondonia; TATIANA DE CAMPOS, CPAF-Acre. |
dc.contributor.author.fl_str_mv |
AZÊVEDO, H. F. BENVINDO, F. D. CAVALCANTE, L. N. HAVERROTH, M. WADT, L. H. de O. CAMPOS, T. de |
dc.subject.por.fl_str_mv |
Western Amazon Marcador microssatélite Transferibilidade Transferability Transferibilidad Formoso Novo Segredo Feijó (AC) Acre Dinámica poblacional Amazonia Ocidental Variación genética Ensayos de variedades Fitomejoramiento Repeticiones de microsatélite Melhoramento genético vegetal Dinâmica populacional Marcador molecular Açaí Variedade Variação Genética Genetic variation Variety trials Euterpe precatoria Plant breeding Microsatellite repeats Population dynamics Loci |
topic |
Western Amazon Marcador microssatélite Transferibilidade Transferability Transferibilidad Formoso Novo Segredo Feijó (AC) Acre Dinámica poblacional Amazonia Ocidental Variación genética Ensayos de variedades Fitomejoramiento Repeticiones de microsatélite Melhoramento genético vegetal Dinâmica populacional Marcador molecular Açaí Variedade Variação Genética Genetic variation Variety trials Euterpe precatoria Plant breeding Microsatellite repeats Population dynamics Loci |
description |
Euterpe precatoria, popularly known as "açaí-do-amazonas", has agronomic, technological and economic potential and has been gaining prominence with the commercialization of its fruits. The production of this açaí-do-amazonas is based on extractivism and management practices have been recommended for sustainable collection. To recommend sustainable rates of fruit collection, it is essential to have information on the genetic variability of natural populations to monitor the recruitment and population dynamics. The objective of this study was to evaluate the transferability of microsatellite loci of E. edulis species to E. precatoria to confirm the applicability of these markers in genetic studies. Eighteen microsatellite loci developed for E. edulis were analyzed using 20 individuals from two natural populations (Formoso and Novo Segredo) of E. precatoria collected at Feijó, State of Acre, Brazil. All loci (100%) were amplified, and of these, nine (50%) were polymorphic. A total of 29 alleles were found in the Novo Segredo population, and 27 alleles were found in the Formoso population, ranging from two to five alleles per locus, with a mean of three alleles per locus. The expected heterozygosity in the Formoso population varied from 0.100 to 0.668, with an average of 0.421. In the Novo Segredo population, a variation between 0.100 and 0.710, with a mean of 0.418, was found. The observed heterozygosity values ranged from 0.100 to 0.800, with averages of 0.333 and 0.267 for Formoso and Novo Segredo, respectively. This set of markers will support further studies on the molecular characterization of the natural populations of E. precatoria and assist with the recommendation of sustainable management practices and strategies for the conservation and genetic improvement of this species. |
publishDate |
2017 |
dc.date.none.fl_str_mv |
2017-11-08T23:30:27Z 2017-11-08T23:30:27Z 2017-11-08 2017 2017-11-13T11:11:11Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
Genetics and Molecular Research, Ribeirão Preto, v. 16, n. 4, p. 1-7, 2017. 1676-5680 http://www.alice.cnptia.embrapa.br/alice/handle/doc/1079268 |
identifier_str_mv |
Genetics and Molecular Research, Ribeirão Preto, v. 16, n. 4, p. 1-7, 2017. 1676-5680 |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1079268 |
dc.language.iso.fl_str_mv |
por |
language |
por |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
collection |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository.name.fl_str_mv |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
_version_ |
1822721290437394432 |