Transferability of heterologous microsatellite loci between species of Euterpe genus.

Detalhes bibliográficos
Autor(a) principal: AZÊVEDO, H. F.
Data de Publicação: 2017
Outros Autores: BENVINDO, F. D., CAVALCANTE, L. N., HAVERROTH, M., WADT, L. H. de O., CAMPOS, T. de
Tipo de documento: Artigo
Idioma: por
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1079268
Resumo: Euterpe precatoria, popularly known as "açaí-do-amazonas", has agronomic, technological and economic potential and has been gaining prominence with the commercialization of its fruits. The production of this açaí-do-amazonas is based on extractivism and management practices have been recommended for sustainable collection. To recommend sustainable rates of fruit collection, it is essential to have information on the genetic variability of natural populations to monitor the recruitment and population dynamics. The objective of this study was to evaluate the transferability of microsatellite loci of E. edulis species to E. precatoria to confirm the applicability of these markers in genetic studies. Eighteen microsatellite loci developed for E. edulis were analyzed using 20 individuals from two natural populations (Formoso and Novo Segredo) of E. precatoria collected at Feijó, State of Acre, Brazil. All loci (100%) were amplified, and of these, nine (50%) were polymorphic. A total of 29 alleles were found in the Novo Segredo population, and 27 alleles were found in the Formoso population, ranging from two to five alleles per locus, with a mean of three alleles per locus. The expected heterozygosity in the Formoso population varied from 0.100 to 0.668, with an average of 0.421. In the Novo Segredo population, a variation between 0.100 and 0.710, with a mean of 0.418, was found. The observed heterozygosity values ranged from 0.100 to 0.800, with averages of 0.333 and 0.267 for Formoso and Novo Segredo, respectively. This set of markers will support further studies on the molecular characterization of the natural populations of E. precatoria and assist with the recommendation of sustainable management practices and strategies for the conservation and genetic improvement of this species.
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spelling Transferability of heterologous microsatellite loci between species of Euterpe genus.Amazonia OcidentalWestern AmazonMarcador microssatéliteTransferibilidadeTransferabilityTransferibilidadFormosoNovo SegredoFeijó (AC)AcreDinámica poblacionalFitomejoramientoRepeticiones de microsatéliteVariación genéticaEnsayos de variedadesMelhoramento genético vegetalAçaíVariedadeVariação GenéticaDinâmica populacionalMarcador molecularEuterpe precatoriaPlant breedingVariety trialsGenetic variationPopulation dynamicsMicrosatellite repeatsLociEuterpe precatoria, popularly known as "açaí-do-amazonas", has agronomic, technological and economic potential and has been gaining prominence with the commercialization of its fruits. The production of this açaí-do-amazonas is based on extractivism and management practices have been recommended for sustainable collection. To recommend sustainable rates of fruit collection, it is essential to have information on the genetic variability of natural populations to monitor the recruitment and population dynamics. The objective of this study was to evaluate the transferability of microsatellite loci of E. edulis species to E. precatoria to confirm the applicability of these markers in genetic studies. Eighteen microsatellite loci developed for E. edulis were analyzed using 20 individuals from two natural populations (Formoso and Novo Segredo) of E. precatoria collected at Feijó, State of Acre, Brazil. All loci (100%) were amplified, and of these, nine (50%) were polymorphic. A total of 29 alleles were found in the Novo Segredo population, and 27 alleles were found in the Formoso population, ranging from two to five alleles per locus, with a mean of three alleles per locus. The expected heterozygosity in the Formoso population varied from 0.100 to 0.668, with an average of 0.421. In the Novo Segredo population, a variation between 0.100 and 0.710, with a mean of 0.418, was found. The observed heterozygosity values ranged from 0.100 to 0.800, with averages of 0.333 and 0.267 for Formoso and Novo Segredo, respectively. This set of markers will support further studies on the molecular characterization of the natural populations of E. precatoria and assist with the recommendation of sustainable management practices and strategies for the conservation and genetic improvement of this species.Hellens Freires Azêvedo, Fundação Oswaldo Cruz; Universidade Federal do Acre (Ufac); Universidade Federal do Acre (Ufac); MOACIR HAVERROTH, CPAF-Acre; LUCIA HELENA DE OLIVEIRA WADT, CPAF-Rondonia; TATIANA DE CAMPOS, CPAF-Acre.AZÊVEDO, H. F.BENVINDO, F. D.CAVALCANTE, L. N.HAVERROTH, M.WADT, L. H. de O.CAMPOS, T. de2017-11-08T23:30:27Z2017-11-08T23:30:27Z2017-11-0820172017-11-13T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Research, Ribeirão Preto, v. 16, n. 4, p. 1-7, 2017.1676-5680http://www.alice.cnptia.embrapa.br/alice/handle/doc/1079268porinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-11-08T23:30:34Zoai:www.alice.cnptia.embrapa.br:doc/1079268Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-11-08T23:30:34falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-11-08T23:30:34Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Transferability of heterologous microsatellite loci between species of Euterpe genus.
title Transferability of heterologous microsatellite loci between species of Euterpe genus.
spellingShingle Transferability of heterologous microsatellite loci between species of Euterpe genus.
AZÊVEDO, H. F.
Amazonia Ocidental
Western Amazon
Marcador microssatélite
Transferibilidade
Transferability
Transferibilidad
Formoso
Novo Segredo
Feijó (AC)
Acre
Dinámica poblacional
Fitomejoramiento
Repeticiones de microsatélite
Variación genética
Ensayos de variedades
Melhoramento genético vegetal
Açaí
Variedade
Variação Genética
Dinâmica populacional
Marcador molecular
Euterpe precatoria
Plant breeding
Variety trials
Genetic variation
Population dynamics
Microsatellite repeats
Loci
title_short Transferability of heterologous microsatellite loci between species of Euterpe genus.
title_full Transferability of heterologous microsatellite loci between species of Euterpe genus.
title_fullStr Transferability of heterologous microsatellite loci between species of Euterpe genus.
title_full_unstemmed Transferability of heterologous microsatellite loci between species of Euterpe genus.
title_sort Transferability of heterologous microsatellite loci between species of Euterpe genus.
author AZÊVEDO, H. F.
author_facet AZÊVEDO, H. F.
BENVINDO, F. D.
CAVALCANTE, L. N.
HAVERROTH, M.
WADT, L. H. de O.
CAMPOS, T. de
author_role author
author2 BENVINDO, F. D.
CAVALCANTE, L. N.
HAVERROTH, M.
WADT, L. H. de O.
CAMPOS, T. de
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Hellens Freires Azêvedo, Fundação Oswaldo Cruz; Universidade Federal do Acre (Ufac); Universidade Federal do Acre (Ufac); MOACIR HAVERROTH, CPAF-Acre; LUCIA HELENA DE OLIVEIRA WADT, CPAF-Rondonia; TATIANA DE CAMPOS, CPAF-Acre.
dc.contributor.author.fl_str_mv AZÊVEDO, H. F.
BENVINDO, F. D.
CAVALCANTE, L. N.
HAVERROTH, M.
WADT, L. H. de O.
CAMPOS, T. de
dc.subject.por.fl_str_mv Amazonia Ocidental
Western Amazon
Marcador microssatélite
Transferibilidade
Transferability
Transferibilidad
Formoso
Novo Segredo
Feijó (AC)
Acre
Dinámica poblacional
Fitomejoramiento
Repeticiones de microsatélite
Variación genética
Ensayos de variedades
Melhoramento genético vegetal
Açaí
Variedade
Variação Genética
Dinâmica populacional
Marcador molecular
Euterpe precatoria
Plant breeding
Variety trials
Genetic variation
Population dynamics
Microsatellite repeats
Loci
topic Amazonia Ocidental
Western Amazon
Marcador microssatélite
Transferibilidade
Transferability
Transferibilidad
Formoso
Novo Segredo
Feijó (AC)
Acre
Dinámica poblacional
Fitomejoramiento
Repeticiones de microsatélite
Variación genética
Ensayos de variedades
Melhoramento genético vegetal
Açaí
Variedade
Variação Genética
Dinâmica populacional
Marcador molecular
Euterpe precatoria
Plant breeding
Variety trials
Genetic variation
Population dynamics
Microsatellite repeats
Loci
description Euterpe precatoria, popularly known as "açaí-do-amazonas", has agronomic, technological and economic potential and has been gaining prominence with the commercialization of its fruits. The production of this açaí-do-amazonas is based on extractivism and management practices have been recommended for sustainable collection. To recommend sustainable rates of fruit collection, it is essential to have information on the genetic variability of natural populations to monitor the recruitment and population dynamics. The objective of this study was to evaluate the transferability of microsatellite loci of E. edulis species to E. precatoria to confirm the applicability of these markers in genetic studies. Eighteen microsatellite loci developed for E. edulis were analyzed using 20 individuals from two natural populations (Formoso and Novo Segredo) of E. precatoria collected at Feijó, State of Acre, Brazil. All loci (100%) were amplified, and of these, nine (50%) were polymorphic. A total of 29 alleles were found in the Novo Segredo population, and 27 alleles were found in the Formoso population, ranging from two to five alleles per locus, with a mean of three alleles per locus. The expected heterozygosity in the Formoso population varied from 0.100 to 0.668, with an average of 0.421. In the Novo Segredo population, a variation between 0.100 and 0.710, with a mean of 0.418, was found. The observed heterozygosity values ranged from 0.100 to 0.800, with averages of 0.333 and 0.267 for Formoso and Novo Segredo, respectively. This set of markers will support further studies on the molecular characterization of the natural populations of E. precatoria and assist with the recommendation of sustainable management practices and strategies for the conservation and genetic improvement of this species.
publishDate 2017
dc.date.none.fl_str_mv 2017-11-08T23:30:27Z
2017-11-08T23:30:27Z
2017-11-08
2017
2017-11-13T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Genetics and Molecular Research, Ribeirão Preto, v. 16, n. 4, p. 1-7, 2017.
1676-5680
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1079268
identifier_str_mv Genetics and Molecular Research, Ribeirão Preto, v. 16, n. 4, p. 1-7, 2017.
1676-5680
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1079268
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