Comparative transcriptomic analysis indicates genes associated with local and systemic resistance to Colletotrichum graminicola in maize.

Detalhes bibliográficos
Autor(a) principal: MIRANDA, V. de J.
Data de Publicação: 2017
Outros Autores: PORTO, W. F., FERNANDES, G. da R., POGUE, R., NOLASCO, D. O., ARAUJO, A. C. G., COTA, L. V., FREITAS, C. G. de, DIAS, S. C., FRANCO, O. L.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1071838
Resumo: The hemibiotrophic fungus Colletotrichum graminicola may cause severe damage to maize, affecting normal development of the plant and decreasing grain yield. In this context, understanding plant defense pathways at the inoculation site and systemically in uninoculated tissues can help in the development of genetic engineering of resistance against this pathogen. Previous work has discussed the molecular basis of maize - C. graminicola interaction. However, many genes involved in defense have not yet been exploited for lack of annotation in public databases. Here, changes in global gene expression were studied in root, male and female inflorescences of maize under local and systemic fungal infection treatments, respectively. RNA-Seq with qPCR was used to indicate genes involved in plant defense. We found that systemic acquired resistance induction in female inflorescences mainly involves accumulation of salicylic acid (SA)-inducible defense genes (ZmNAC, ZmHSF, ZmWRKY, ZmbZIP and PR1) and potential genes involved in chromatin modification. Furthermore, transcripts involved in jasmonic acid (JA) and ethylene (ET) signaling pathways were also accumulated and may participate in plant immunity. Moreover, several genes were functionally re-annotated based on domain signature, indicating novel candidates to be tested in strategies involving gene knockout and overexpression in plants.
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spelling Comparative transcriptomic analysis indicates genes associated with local and systemic resistance to Colletotrichum graminicola in maize.Resistência a doençaDoença de plantaMilhoAntracnoseGeneThe hemibiotrophic fungus Colletotrichum graminicola may cause severe damage to maize, affecting normal development of the plant and decreasing grain yield. In this context, understanding plant defense pathways at the inoculation site and systemically in uninoculated tissues can help in the development of genetic engineering of resistance against this pathogen. Previous work has discussed the molecular basis of maize - C. graminicola interaction. However, many genes involved in defense have not yet been exploited for lack of annotation in public databases. Here, changes in global gene expression were studied in root, male and female inflorescences of maize under local and systemic fungal infection treatments, respectively. RNA-Seq with qPCR was used to indicate genes involved in plant defense. We found that systemic acquired resistance induction in female inflorescences mainly involves accumulation of salicylic acid (SA)-inducible defense genes (ZmNAC, ZmHSF, ZmWRKY, ZmbZIP and PR1) and potential genes involved in chromatin modification. Furthermore, transcripts involved in jasmonic acid (JA) and ethylene (ET) signaling pathways were also accumulated and may participate in plant immunity. Moreover, several genes were functionally re-annotated based on domain signature, indicating novel candidates to be tested in strategies involving gene knockout and overexpression in plants.LUCIANO VIANA COTA, CNPMS.MIRANDA, V. de J.PORTO, W. F.FERNANDES, G. da R.POGUE, R.NOLASCO, D. O.ARAUJO, A. C. G.COTA, L. V.FREITAS, C. G. deDIAS, S. C.FRANCO, O. L.2017-07-03T11:11:11Z2017-07-03T11:11:11Z2017-07-0320172017-07-03T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleScientific Reports, v. 7, n. 2483, p. 1-14, 2017.http://www.alice.cnptia.embrapa.br/alice/handle/doc/107183810.1038/s41598-017-02298-8enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T04:33:58Zoai:www.alice.cnptia.embrapa.br:doc/1071838Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T04:33:58falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T04:33:58Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Comparative transcriptomic analysis indicates genes associated with local and systemic resistance to Colletotrichum graminicola in maize.
title Comparative transcriptomic analysis indicates genes associated with local and systemic resistance to Colletotrichum graminicola in maize.
spellingShingle Comparative transcriptomic analysis indicates genes associated with local and systemic resistance to Colletotrichum graminicola in maize.
MIRANDA, V. de J.
Resistência a doença
Doença de planta
Milho
Antracnose
Gene
title_short Comparative transcriptomic analysis indicates genes associated with local and systemic resistance to Colletotrichum graminicola in maize.
title_full Comparative transcriptomic analysis indicates genes associated with local and systemic resistance to Colletotrichum graminicola in maize.
title_fullStr Comparative transcriptomic analysis indicates genes associated with local and systemic resistance to Colletotrichum graminicola in maize.
title_full_unstemmed Comparative transcriptomic analysis indicates genes associated with local and systemic resistance to Colletotrichum graminicola in maize.
title_sort Comparative transcriptomic analysis indicates genes associated with local and systemic resistance to Colletotrichum graminicola in maize.
author MIRANDA, V. de J.
author_facet MIRANDA, V. de J.
PORTO, W. F.
FERNANDES, G. da R.
POGUE, R.
NOLASCO, D. O.
ARAUJO, A. C. G.
COTA, L. V.
FREITAS, C. G. de
DIAS, S. C.
FRANCO, O. L.
author_role author
author2 PORTO, W. F.
FERNANDES, G. da R.
POGUE, R.
NOLASCO, D. O.
ARAUJO, A. C. G.
COTA, L. V.
FREITAS, C. G. de
DIAS, S. C.
FRANCO, O. L.
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv LUCIANO VIANA COTA, CNPMS.
dc.contributor.author.fl_str_mv MIRANDA, V. de J.
PORTO, W. F.
FERNANDES, G. da R.
POGUE, R.
NOLASCO, D. O.
ARAUJO, A. C. G.
COTA, L. V.
FREITAS, C. G. de
DIAS, S. C.
FRANCO, O. L.
dc.subject.por.fl_str_mv Resistência a doença
Doença de planta
Milho
Antracnose
Gene
topic Resistência a doença
Doença de planta
Milho
Antracnose
Gene
description The hemibiotrophic fungus Colletotrichum graminicola may cause severe damage to maize, affecting normal development of the plant and decreasing grain yield. In this context, understanding plant defense pathways at the inoculation site and systemically in uninoculated tissues can help in the development of genetic engineering of resistance against this pathogen. Previous work has discussed the molecular basis of maize - C. graminicola interaction. However, many genes involved in defense have not yet been exploited for lack of annotation in public databases. Here, changes in global gene expression were studied in root, male and female inflorescences of maize under local and systemic fungal infection treatments, respectively. RNA-Seq with qPCR was used to indicate genes involved in plant defense. We found that systemic acquired resistance induction in female inflorescences mainly involves accumulation of salicylic acid (SA)-inducible defense genes (ZmNAC, ZmHSF, ZmWRKY, ZmbZIP and PR1) and potential genes involved in chromatin modification. Furthermore, transcripts involved in jasmonic acid (JA) and ethylene (ET) signaling pathways were also accumulated and may participate in plant immunity. Moreover, several genes were functionally re-annotated based on domain signature, indicating novel candidates to be tested in strategies involving gene knockout and overexpression in plants.
publishDate 2017
dc.date.none.fl_str_mv 2017-07-03T11:11:11Z
2017-07-03T11:11:11Z
2017-07-03
2017
2017-07-03T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Scientific Reports, v. 7, n. 2483, p. 1-14, 2017.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1071838
10.1038/s41598-017-02298-8
identifier_str_mv Scientific Reports, v. 7, n. 2483, p. 1-14, 2017.
10.1038/s41598-017-02298-8
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1071838
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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