Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale.

Detalhes bibliográficos
Autor(a) principal: SG JUNIOR, D.
Data de Publicação: 2010
Outros Autores: ARAUJO, F. R., ALMEIDA JUNIOR, N. F., ADI, S. S., CHEUNG, L. M., FRAGOSO, S. P., SOARES, C. O., ROSINHA, G. M. S., FONSECA, A. H.
Tipo de documento: Artigo
Idioma: por
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/873036
Resumo: The sequencing of the complete genome of Anaplasma marginale has enabled the identification of several genes that encode membrane proteins, thereby increasing the chances of identifying candidate immunogens. Little is known regarding the genetic variability of genes that encode membrane proteins in A. marginale isolates. The aim of the present study was to determine the degree of conservation of the predicted amino acid sequences of OMP1, OMP4, OMP5, OMP7, OMP8, OMP10, OMP14, OMP15, SODb, OPAG1, OPAG3, VirB3, VirB9-1, PepA, EF-Tu and AM854 proteins in a Brazilian isolate of A. marginale compared to other isolates. Hence, primers were used to amplify these genes: omp1, omp4, omp5, omp7, omp8, omp10, omp14, omp15, sodb, opag1, opag3, virb3, VirB9-1, pepA, ef-tu and am854. After polimerase chain reaction amplification, the products were cloned and sequenced using the Sanger method and the predicted amino acid sequence were multi-aligned using the CLUSTALW and MEGA 4 programs, comparing the predicted sequences between the Brazilian, Saint Maries, Florida and A. marginale centrale isolates. With the exception of outer membrane protein (OMP) 7, all proteins exhibited 92-100% homology to the other A. marginale isolates. However, only OMP1, OMP5, EF-Tu, VirB3, SODb and VirB9-1 were selected as potential immunogens capable of promoting cross-protection between isolates due to the high degree of homology (over 72%) also found with A. (centrale) marginale.
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spelling Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale.Anaplasma MarginaleAnaplasmoseSanidade AnimalThe sequencing of the complete genome of Anaplasma marginale has enabled the identification of several genes that encode membrane proteins, thereby increasing the chances of identifying candidate immunogens. Little is known regarding the genetic variability of genes that encode membrane proteins in A. marginale isolates. The aim of the present study was to determine the degree of conservation of the predicted amino acid sequences of OMP1, OMP4, OMP5, OMP7, OMP8, OMP10, OMP14, OMP15, SODb, OPAG1, OPAG3, VirB3, VirB9-1, PepA, EF-Tu and AM854 proteins in a Brazilian isolate of A. marginale compared to other isolates. Hence, primers were used to amplify these genes: omp1, omp4, omp5, omp7, omp8, omp10, omp14, omp15, sodb, opag1, opag3, virb3, VirB9-1, pepA, ef-tu and am854. After polimerase chain reaction amplification, the products were cloned and sequenced using the Sanger method and the predicted amino acid sequence were multi-aligned using the CLUSTALW and MEGA 4 programs, comparing the predicted sequences between the Brazilian, Saint Maries, Florida and A. marginale centrale isolates. With the exception of outer membrane protein (OMP) 7, all proteins exhibited 92-100% homology to the other A. marginale isolates. However, only OMP1, OMP5, EF-Tu, VirB3, SODb and VirB9-1 were selected as potential immunogens capable of promoting cross-protection between isolates due to the high degree of homology (over 72%) also found with A. (centrale) marginale.Daniel SG Junior, Universidade Federal Rural do Rio de Janeiro; FLABIO RIBEIRO ARAUJO, CNPGC; Nalvo F Almeida Junior, UFMS; Said S Adi, UFMS; Luciana M Cheung, UFMS; Stenio P Fragoso, Instituto de Biologia Molecular do Paraná; CLEBER OLIVEIRA SOARES, CNPGC; GRACIA MARIA SOARES ROSINHA, CNPGC; Adivaldo H Fonseca, Universidade Federal Rural do Rio de Janeiro.SG JUNIOR, D.ARAUJO, F. R.ALMEIDA JUNIOR, N. F.ADI, S. S.CHEUNG, L. M.FRAGOSO, S. P.SOARES, C. O.ROSINHA, G. M. S.FONSECA, A. H.2011-04-09T16:07:43Z2011-04-09T16:07:43Z2011-01-1320102011-04-10T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleMemórias do Instituto Oswaldo Cruz, v. 105, n. 7, p. 843-849, nov., 2010.http://www.alice.cnptia.embrapa.br/alice/handle/doc/873036porinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-15T22:14:02Zoai:www.alice.cnptia.embrapa.br:doc/873036Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-15T22:14:02falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-15T22:14:02Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale.
title Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale.
spellingShingle Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale.
SG JUNIOR, D.
Anaplasma Marginale
Anaplasmose
Sanidade Animal
title_short Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale.
title_full Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale.
title_fullStr Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale.
title_full_unstemmed Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale.
title_sort Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale.
author SG JUNIOR, D.
author_facet SG JUNIOR, D.
ARAUJO, F. R.
ALMEIDA JUNIOR, N. F.
ADI, S. S.
CHEUNG, L. M.
FRAGOSO, S. P.
SOARES, C. O.
ROSINHA, G. M. S.
FONSECA, A. H.
author_role author
author2 ARAUJO, F. R.
ALMEIDA JUNIOR, N. F.
ADI, S. S.
CHEUNG, L. M.
FRAGOSO, S. P.
SOARES, C. O.
ROSINHA, G. M. S.
FONSECA, A. H.
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Daniel SG Junior, Universidade Federal Rural do Rio de Janeiro; FLABIO RIBEIRO ARAUJO, CNPGC; Nalvo F Almeida Junior, UFMS; Said S Adi, UFMS; Luciana M Cheung, UFMS; Stenio P Fragoso, Instituto de Biologia Molecular do Paraná; CLEBER OLIVEIRA SOARES, CNPGC; GRACIA MARIA SOARES ROSINHA, CNPGC; Adivaldo H Fonseca, Universidade Federal Rural do Rio de Janeiro.
dc.contributor.author.fl_str_mv SG JUNIOR, D.
ARAUJO, F. R.
ALMEIDA JUNIOR, N. F.
ADI, S. S.
CHEUNG, L. M.
FRAGOSO, S. P.
SOARES, C. O.
ROSINHA, G. M. S.
FONSECA, A. H.
dc.subject.por.fl_str_mv Anaplasma Marginale
Anaplasmose
Sanidade Animal
topic Anaplasma Marginale
Anaplasmose
Sanidade Animal
description The sequencing of the complete genome of Anaplasma marginale has enabled the identification of several genes that encode membrane proteins, thereby increasing the chances of identifying candidate immunogens. Little is known regarding the genetic variability of genes that encode membrane proteins in A. marginale isolates. The aim of the present study was to determine the degree of conservation of the predicted amino acid sequences of OMP1, OMP4, OMP5, OMP7, OMP8, OMP10, OMP14, OMP15, SODb, OPAG1, OPAG3, VirB3, VirB9-1, PepA, EF-Tu and AM854 proteins in a Brazilian isolate of A. marginale compared to other isolates. Hence, primers were used to amplify these genes: omp1, omp4, omp5, omp7, omp8, omp10, omp14, omp15, sodb, opag1, opag3, virb3, VirB9-1, pepA, ef-tu and am854. After polimerase chain reaction amplification, the products were cloned and sequenced using the Sanger method and the predicted amino acid sequence were multi-aligned using the CLUSTALW and MEGA 4 programs, comparing the predicted sequences between the Brazilian, Saint Maries, Florida and A. marginale centrale isolates. With the exception of outer membrane protein (OMP) 7, all proteins exhibited 92-100% homology to the other A. marginale isolates. However, only OMP1, OMP5, EF-Tu, VirB3, SODb and VirB9-1 were selected as potential immunogens capable of promoting cross-protection between isolates due to the high degree of homology (over 72%) also found with A. (centrale) marginale.
publishDate 2010
dc.date.none.fl_str_mv 2010
2011-04-09T16:07:43Z
2011-04-09T16:07:43Z
2011-01-13
2011-04-10T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Memórias do Instituto Oswaldo Cruz, v. 105, n. 7, p. 843-849, nov., 2010.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/873036
identifier_str_mv Memórias do Instituto Oswaldo Cruz, v. 105, n. 7, p. 843-849, nov., 2010.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/873036
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
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instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
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instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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