Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale.
Autor(a) principal: | |
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Data de Publicação: | 2010 |
Outros Autores: | , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | por |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/873036 |
Resumo: | The sequencing of the complete genome of Anaplasma marginale has enabled the identification of several genes that encode membrane proteins, thereby increasing the chances of identifying candidate immunogens. Little is known regarding the genetic variability of genes that encode membrane proteins in A. marginale isolates. The aim of the present study was to determine the degree of conservation of the predicted amino acid sequences of OMP1, OMP4, OMP5, OMP7, OMP8, OMP10, OMP14, OMP15, SODb, OPAG1, OPAG3, VirB3, VirB9-1, PepA, EF-Tu and AM854 proteins in a Brazilian isolate of A. marginale compared to other isolates. Hence, primers were used to amplify these genes: omp1, omp4, omp5, omp7, omp8, omp10, omp14, omp15, sodb, opag1, opag3, virb3, VirB9-1, pepA, ef-tu and am854. After polimerase chain reaction amplification, the products were cloned and sequenced using the Sanger method and the predicted amino acid sequence were multi-aligned using the CLUSTALW and MEGA 4 programs, comparing the predicted sequences between the Brazilian, Saint Maries, Florida and A. marginale centrale isolates. With the exception of outer membrane protein (OMP) 7, all proteins exhibited 92-100% homology to the other A. marginale isolates. However, only OMP1, OMP5, EF-Tu, VirB3, SODb and VirB9-1 were selected as potential immunogens capable of promoting cross-protection between isolates due to the high degree of homology (over 72%) also found with A. (centrale) marginale. |
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Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale.Anaplasma MarginaleAnaplasmoseSanidade AnimalThe sequencing of the complete genome of Anaplasma marginale has enabled the identification of several genes that encode membrane proteins, thereby increasing the chances of identifying candidate immunogens. Little is known regarding the genetic variability of genes that encode membrane proteins in A. marginale isolates. The aim of the present study was to determine the degree of conservation of the predicted amino acid sequences of OMP1, OMP4, OMP5, OMP7, OMP8, OMP10, OMP14, OMP15, SODb, OPAG1, OPAG3, VirB3, VirB9-1, PepA, EF-Tu and AM854 proteins in a Brazilian isolate of A. marginale compared to other isolates. Hence, primers were used to amplify these genes: omp1, omp4, omp5, omp7, omp8, omp10, omp14, omp15, sodb, opag1, opag3, virb3, VirB9-1, pepA, ef-tu and am854. After polimerase chain reaction amplification, the products were cloned and sequenced using the Sanger method and the predicted amino acid sequence were multi-aligned using the CLUSTALW and MEGA 4 programs, comparing the predicted sequences between the Brazilian, Saint Maries, Florida and A. marginale centrale isolates. With the exception of outer membrane protein (OMP) 7, all proteins exhibited 92-100% homology to the other A. marginale isolates. However, only OMP1, OMP5, EF-Tu, VirB3, SODb and VirB9-1 were selected as potential immunogens capable of promoting cross-protection between isolates due to the high degree of homology (over 72%) also found with A. (centrale) marginale.Daniel SG Junior, Universidade Federal Rural do Rio de Janeiro; FLABIO RIBEIRO ARAUJO, CNPGC; Nalvo F Almeida Junior, UFMS; Said S Adi, UFMS; Luciana M Cheung, UFMS; Stenio P Fragoso, Instituto de Biologia Molecular do Paraná; CLEBER OLIVEIRA SOARES, CNPGC; GRACIA MARIA SOARES ROSINHA, CNPGC; Adivaldo H Fonseca, Universidade Federal Rural do Rio de Janeiro.SG JUNIOR, D.ARAUJO, F. R.ALMEIDA JUNIOR, N. F.ADI, S. S.CHEUNG, L. M.FRAGOSO, S. P.SOARES, C. O.ROSINHA, G. M. S.FONSECA, A. H.2011-04-09T16:07:43Z2011-04-09T16:07:43Z2011-01-1320102011-04-10T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleMemórias do Instituto Oswaldo Cruz, v. 105, n. 7, p. 843-849, nov., 2010.http://www.alice.cnptia.embrapa.br/alice/handle/doc/873036porinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-15T22:14:02Zoai:www.alice.cnptia.embrapa.br:doc/873036Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-15T22:14:02falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-15T22:14:02Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale. |
title |
Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale. |
spellingShingle |
Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale. SG JUNIOR, D. Anaplasma Marginale Anaplasmose Sanidade Animal |
title_short |
Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale. |
title_full |
Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale. |
title_fullStr |
Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale. |
title_full_unstemmed |
Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale. |
title_sort |
Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale. |
author |
SG JUNIOR, D. |
author_facet |
SG JUNIOR, D. ARAUJO, F. R. ALMEIDA JUNIOR, N. F. ADI, S. S. CHEUNG, L. M. FRAGOSO, S. P. SOARES, C. O. ROSINHA, G. M. S. FONSECA, A. H. |
author_role |
author |
author2 |
ARAUJO, F. R. ALMEIDA JUNIOR, N. F. ADI, S. S. CHEUNG, L. M. FRAGOSO, S. P. SOARES, C. O. ROSINHA, G. M. S. FONSECA, A. H. |
author2_role |
author author author author author author author author |
dc.contributor.none.fl_str_mv |
Daniel SG Junior, Universidade Federal Rural do Rio de Janeiro; FLABIO RIBEIRO ARAUJO, CNPGC; Nalvo F Almeida Junior, UFMS; Said S Adi, UFMS; Luciana M Cheung, UFMS; Stenio P Fragoso, Instituto de Biologia Molecular do Paraná; CLEBER OLIVEIRA SOARES, CNPGC; GRACIA MARIA SOARES ROSINHA, CNPGC; Adivaldo H Fonseca, Universidade Federal Rural do Rio de Janeiro. |
dc.contributor.author.fl_str_mv |
SG JUNIOR, D. ARAUJO, F. R. ALMEIDA JUNIOR, N. F. ADI, S. S. CHEUNG, L. M. FRAGOSO, S. P. SOARES, C. O. ROSINHA, G. M. S. FONSECA, A. H. |
dc.subject.por.fl_str_mv |
Anaplasma Marginale Anaplasmose Sanidade Animal |
topic |
Anaplasma Marginale Anaplasmose Sanidade Animal |
description |
The sequencing of the complete genome of Anaplasma marginale has enabled the identification of several genes that encode membrane proteins, thereby increasing the chances of identifying candidate immunogens. Little is known regarding the genetic variability of genes that encode membrane proteins in A. marginale isolates. The aim of the present study was to determine the degree of conservation of the predicted amino acid sequences of OMP1, OMP4, OMP5, OMP7, OMP8, OMP10, OMP14, OMP15, SODb, OPAG1, OPAG3, VirB3, VirB9-1, PepA, EF-Tu and AM854 proteins in a Brazilian isolate of A. marginale compared to other isolates. Hence, primers were used to amplify these genes: omp1, omp4, omp5, omp7, omp8, omp10, omp14, omp15, sodb, opag1, opag3, virb3, VirB9-1, pepA, ef-tu and am854. After polimerase chain reaction amplification, the products were cloned and sequenced using the Sanger method and the predicted amino acid sequence were multi-aligned using the CLUSTALW and MEGA 4 programs, comparing the predicted sequences between the Brazilian, Saint Maries, Florida and A. marginale centrale isolates. With the exception of outer membrane protein (OMP) 7, all proteins exhibited 92-100% homology to the other A. marginale isolates. However, only OMP1, OMP5, EF-Tu, VirB3, SODb and VirB9-1 were selected as potential immunogens capable of promoting cross-protection between isolates due to the high degree of homology (over 72%) also found with A. (centrale) marginale. |
publishDate |
2010 |
dc.date.none.fl_str_mv |
2010 2011-04-09T16:07:43Z 2011-04-09T16:07:43Z 2011-01-13 2011-04-10T11:11:11Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/publishedVersion info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
Memórias do Instituto Oswaldo Cruz, v. 105, n. 7, p. 843-849, nov., 2010. http://www.alice.cnptia.embrapa.br/alice/handle/doc/873036 |
identifier_str_mv |
Memórias do Instituto Oswaldo Cruz, v. 105, n. 7, p. 843-849, nov., 2010. |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/873036 |
dc.language.iso.fl_str_mv |
por |
language |
por |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
collection |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository.name.fl_str_mv |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
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1794503325296623616 |