Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale

Detalhes bibliográficos
Autor(a) principal: SG Junior,Daniel
Data de Publicação: 2010
Outros Autores: Araújo,Flábio R, Almeida Junior,Nalvo F, Adi,Said S, Cheung,Luciana M, Fragoso,Stenio P, Ramos,Carlos AN, Oliveira,Renato Henrique M de, Santos,Caroline S, Bacanelli,Gisele, Soares,Cleber O, Rosinha,Grácia MS, Fonseca,Adivaldo H
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Memórias do Instituto Oswaldo Cruz
Texto Completo: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762010000700001
Resumo: The sequencing of the complete genome of Anaplasma marginale has enabled the identification of several genes that encode membrane proteins, thereby increasing the chances of identifying candidate immunogens. Little is known regarding the genetic variability of genes that encode membrane proteins in A. marginale isolates. The aim of the present study was to determine the degree of conservation of the predicted amino acid sequences of OMP1, OMP4, OMP5, OMP7, OMP8, OMP10, OMP14, OMP15, SODb, OPAG1, OPAG3, VirB3, VirB9-1, PepA, EF-Tu and AM854 proteins in a Brazilian isolate of A. marginale compared to other isolates. Hence, primers were used to amplify these genes: omp1, omp4, omp5, omp7, omp8, omp10, omp14, omp15, sodb, opag1, opag3, virb3, VirB9-1, pepA, ef-tu and am854. After polimerase chain reaction amplification, the products were cloned and sequenced using the Sanger method and the predicted amino acid sequence were multi-aligned using the CLUSTALW and MEGA 4 programs, comparing the predicted sequences between the Brazilian, Saint Maries, Florida and A. marginale centrale isolates. With the exception of outer membrane protein (OMP) 7, all proteins exhibited 92-100% homology to the other A. marginale isolates. However, only OMP1, OMP5, EF-Tu, VirB3, SODb and VirB9-1 were selected as potential immunogens capable of promoting cross-protection between isolates due to the high degree of homology (over 72%) also found with A. (centrale) marginale.
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spelling Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginalemembrane proteinsOMPsAnaplasma marginaleBrazilThe sequencing of the complete genome of Anaplasma marginale has enabled the identification of several genes that encode membrane proteins, thereby increasing the chances of identifying candidate immunogens. Little is known regarding the genetic variability of genes that encode membrane proteins in A. marginale isolates. The aim of the present study was to determine the degree of conservation of the predicted amino acid sequences of OMP1, OMP4, OMP5, OMP7, OMP8, OMP10, OMP14, OMP15, SODb, OPAG1, OPAG3, VirB3, VirB9-1, PepA, EF-Tu and AM854 proteins in a Brazilian isolate of A. marginale compared to other isolates. Hence, primers were used to amplify these genes: omp1, omp4, omp5, omp7, omp8, omp10, omp14, omp15, sodb, opag1, opag3, virb3, VirB9-1, pepA, ef-tu and am854. After polimerase chain reaction amplification, the products were cloned and sequenced using the Sanger method and the predicted amino acid sequence were multi-aligned using the CLUSTALW and MEGA 4 programs, comparing the predicted sequences between the Brazilian, Saint Maries, Florida and A. marginale centrale isolates. With the exception of outer membrane protein (OMP) 7, all proteins exhibited 92-100% homology to the other A. marginale isolates. However, only OMP1, OMP5, EF-Tu, VirB3, SODb and VirB9-1 were selected as potential immunogens capable of promoting cross-protection between isolates due to the high degree of homology (over 72%) also found with A. (centrale) marginale.Instituto Oswaldo Cruz, Ministério da Saúde2010-11-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://www.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762010000700001Memórias do Instituto Oswaldo Cruz v.105 n.7 2010reponame:Memórias do Instituto Oswaldo Cruzinstname:Fundação Oswaldo Cruzinstacron:FIOCRUZ10.1590/S0074-02762010000700001info:eu-repo/semantics/openAccessSG Junior,DanielAraújo,Flábio RAlmeida Junior,Nalvo FAdi,Said SCheung,Luciana MFragoso,Stenio PRamos,Carlos ANOliveira,Renato Henrique M deSantos,Caroline SBacanelli,GiseleSoares,Cleber ORosinha,Grácia MSFonseca,Adivaldo Heng2020-04-25T17:50:52Zhttp://www.scielo.br/oai/scielo-oai.php0074-02761678-8060opendoar:null2020-04-26 02:17:16.822Memórias do Instituto Oswaldo Cruz - Fundação Oswaldo Cruztrue
dc.title.none.fl_str_mv Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale
title Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale
spellingShingle Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale
SG Junior,Daniel
membrane proteins
OMPs
Anaplasma marginale
Brazil
title_short Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale
title_full Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale
title_fullStr Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale
title_full_unstemmed Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale
title_sort Analysis of membrane protein genes in a Brazilian isolate of Anaplasma marginale
author SG Junior,Daniel
author_facet SG Junior,Daniel
Araújo,Flábio R
Almeida Junior,Nalvo F
Adi,Said S
Cheung,Luciana M
Fragoso,Stenio P
Ramos,Carlos AN
Oliveira,Renato Henrique M de
Santos,Caroline S
Bacanelli,Gisele
Soares,Cleber O
Rosinha,Grácia MS
Fonseca,Adivaldo H
author_role author
author2 Araújo,Flábio R
Almeida Junior,Nalvo F
Adi,Said S
Cheung,Luciana M
Fragoso,Stenio P
Ramos,Carlos AN
Oliveira,Renato Henrique M de
Santos,Caroline S
Bacanelli,Gisele
Soares,Cleber O
Rosinha,Grácia MS
Fonseca,Adivaldo H
author2_role author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv SG Junior,Daniel
Araújo,Flábio R
Almeida Junior,Nalvo F
Adi,Said S
Cheung,Luciana M
Fragoso,Stenio P
Ramos,Carlos AN
Oliveira,Renato Henrique M de
Santos,Caroline S
Bacanelli,Gisele
Soares,Cleber O
Rosinha,Grácia MS
Fonseca,Adivaldo H
dc.subject.por.fl_str_mv membrane proteins
OMPs
Anaplasma marginale
Brazil
topic membrane proteins
OMPs
Anaplasma marginale
Brazil
dc.description.none.fl_txt_mv The sequencing of the complete genome of Anaplasma marginale has enabled the identification of several genes that encode membrane proteins, thereby increasing the chances of identifying candidate immunogens. Little is known regarding the genetic variability of genes that encode membrane proteins in A. marginale isolates. The aim of the present study was to determine the degree of conservation of the predicted amino acid sequences of OMP1, OMP4, OMP5, OMP7, OMP8, OMP10, OMP14, OMP15, SODb, OPAG1, OPAG3, VirB3, VirB9-1, PepA, EF-Tu and AM854 proteins in a Brazilian isolate of A. marginale compared to other isolates. Hence, primers were used to amplify these genes: omp1, omp4, omp5, omp7, omp8, omp10, omp14, omp15, sodb, opag1, opag3, virb3, VirB9-1, pepA, ef-tu and am854. After polimerase chain reaction amplification, the products were cloned and sequenced using the Sanger method and the predicted amino acid sequence were multi-aligned using the CLUSTALW and MEGA 4 programs, comparing the predicted sequences between the Brazilian, Saint Maries, Florida and A. marginale centrale isolates. With the exception of outer membrane protein (OMP) 7, all proteins exhibited 92-100% homology to the other A. marginale isolates. However, only OMP1, OMP5, EF-Tu, VirB3, SODb and VirB9-1 were selected as potential immunogens capable of promoting cross-protection between isolates due to the high degree of homology (over 72%) also found with A. (centrale) marginale.
description The sequencing of the complete genome of Anaplasma marginale has enabled the identification of several genes that encode membrane proteins, thereby increasing the chances of identifying candidate immunogens. Little is known regarding the genetic variability of genes that encode membrane proteins in A. marginale isolates. The aim of the present study was to determine the degree of conservation of the predicted amino acid sequences of OMP1, OMP4, OMP5, OMP7, OMP8, OMP10, OMP14, OMP15, SODb, OPAG1, OPAG3, VirB3, VirB9-1, PepA, EF-Tu and AM854 proteins in a Brazilian isolate of A. marginale compared to other isolates. Hence, primers were used to amplify these genes: omp1, omp4, omp5, omp7, omp8, omp10, omp14, omp15, sodb, opag1, opag3, virb3, VirB9-1, pepA, ef-tu and am854. After polimerase chain reaction amplification, the products were cloned and sequenced using the Sanger method and the predicted amino acid sequence were multi-aligned using the CLUSTALW and MEGA 4 programs, comparing the predicted sequences between the Brazilian, Saint Maries, Florida and A. marginale centrale isolates. With the exception of outer membrane protein (OMP) 7, all proteins exhibited 92-100% homology to the other A. marginale isolates. However, only OMP1, OMP5, EF-Tu, VirB3, SODb and VirB9-1 were selected as potential immunogens capable of promoting cross-protection between isolates due to the high degree of homology (over 72%) also found with A. (centrale) marginale.
publishDate 2010
dc.date.none.fl_str_mv 2010-11-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762010000700001
url http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762010000700001
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S0074-02762010000700001
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Instituto Oswaldo Cruz, Ministério da Saúde
publisher.none.fl_str_mv Instituto Oswaldo Cruz, Ministério da Saúde
dc.source.none.fl_str_mv Memórias do Instituto Oswaldo Cruz v.105 n.7 2010
reponame:Memórias do Instituto Oswaldo Cruz
instname:Fundação Oswaldo Cruz
instacron:FIOCRUZ
reponame_str Memórias do Instituto Oswaldo Cruz
collection Memórias do Instituto Oswaldo Cruz
instname_str Fundação Oswaldo Cruz
instacron_str FIOCRUZ
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repository.name.fl_str_mv Memórias do Instituto Oswaldo Cruz - Fundação Oswaldo Cruz
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