A betabaculovirus encoding a gp64 homolog.
Autor(a) principal: | |
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Data de Publicação: | 2016 |
Outros Autores: | , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | por |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/1059049 |
Resumo: | A betabaculovirus (DisaGV) was isolated from Diatraea saccharalis (Lepidoptera: Crambidae), one of the most important insect pests of the sugarcane and other monocot cultures in Brazil. The complete genome sequence of DisaGV was determined using the 454-pyrosequencing method. The genome was 98,392 bp long, which makes it the smallest lepidopteran-infecting baculovirus sequenced to date. It had a G + C content of 29.7 % encoding 125 putative open reading frames (ORF). All the 37 baculovirus core genes and a set of 19 betabaculovirus-specific genes were found. A group of 13 putative genes was not found in any other baculovirus genome sequenced so far. A phylogenetic analysis indicated that DisaGV is a member of Betabaculovirus genus and that it is a sister group to a cluster formed by ChocGV, ErelGV, PiraGV isolates, ClanGV, CaLGV, CpGV, CrleGV, AdorGV, PhopGV and EpapGV. Surprisingly, we found in the DisaGV genome a G protein-coupled receptor related to lepidopteran and other insect virus genes and a gp64 homolog, which is likely a product of horizontal gene transfer from Group 1 alphabaculoviruses. DisaGV represents a distinct lineage of the genus Betabaculovirus. It is closely related to the CpGV-related group and presents the smallest genome in size so far. Remarkably, we found a homolog of gp64, which was reported solely in group 1 alphabaculovirus genomes so far. |
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A betabaculovirus encoding a gp64 homolog.CanaGenomaBetabaculovirusLepidopteraA betabaculovirus (DisaGV) was isolated from Diatraea saccharalis (Lepidoptera: Crambidae), one of the most important insect pests of the sugarcane and other monocot cultures in Brazil. The complete genome sequence of DisaGV was determined using the 454-pyrosequencing method. The genome was 98,392 bp long, which makes it the smallest lepidopteran-infecting baculovirus sequenced to date. It had a G + C content of 29.7 % encoding 125 putative open reading frames (ORF). All the 37 baculovirus core genes and a set of 19 betabaculovirus-specific genes were found. A group of 13 putative genes was not found in any other baculovirus genome sequenced so far. A phylogenetic analysis indicated that DisaGV is a member of Betabaculovirus genus and that it is a sister group to a cluster formed by ChocGV, ErelGV, PiraGV isolates, ClanGV, CaLGV, CpGV, CrleGV, AdorGV, PhopGV and EpapGV. Surprisingly, we found in the DisaGV genome a G protein-coupled receptor related to lepidopteran and other insect virus genes and a gp64 homolog, which is likely a product of horizontal gene transfer from Group 1 alphabaculoviruses. DisaGV represents a distinct lineage of the genus Betabaculovirus. It is closely related to the CpGV-related group and presents the smallest genome in size so far. Remarkably, we found a homolog of gp64, which was reported solely in group 1 alphabaculovirus genomes so far.DANIEL M. P. ARDISSON-ARAÚJO, UNB; BRUNA T. PEREIRA, USP; FERNANDO L. MELO, UNB; BERGMANN M. RIBEIRO, UNB; SÔNIA N. BÁO, UNB; PAOLO M. de A. ZANOTTO, USP; FLÁVIO MOSCARDI, CNPSo - In memorian; ELLIOT W. KITAJIMA, ESALQ - USP; DANIEL RICARDO SÓSA GOMEZ, CNPSO; JOSÉ L. C. WOLFF, Universidade Presbiteriana Mackenzie.ARDISSON-ARAÚJO, D. M. P.PEREIRA, B. T.MELO, F. L.RIBEIRO, B. M.BÁO, S. N.ZANOTTO, P. M. de A.MOSCARDI, F.KITAJIMA, E. W.SOSA-GÓMEZ, D. R.WOLFF, J. L. C.2016-12-21T11:11:11Z2016-12-21T11:11:11Z2016-12-2120162017-06-01T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleBMC Genomics, v. 17, n. 1, 9 p., Feb. 2016.1471-2164http://www.alice.cnptia.embrapa.br/alice/handle/doc/105904910.1186/s12864-016-2408-9porinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T03:56:47Zoai:www.alice.cnptia.embrapa.br:doc/1059049Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T03:56:47falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T03:56:47Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
A betabaculovirus encoding a gp64 homolog. |
title |
A betabaculovirus encoding a gp64 homolog. |
spellingShingle |
A betabaculovirus encoding a gp64 homolog. ARDISSON-ARAÚJO, D. M. P. Cana Genoma Betabaculovirus Lepidoptera |
title_short |
A betabaculovirus encoding a gp64 homolog. |
title_full |
A betabaculovirus encoding a gp64 homolog. |
title_fullStr |
A betabaculovirus encoding a gp64 homolog. |
title_full_unstemmed |
A betabaculovirus encoding a gp64 homolog. |
title_sort |
A betabaculovirus encoding a gp64 homolog. |
author |
ARDISSON-ARAÚJO, D. M. P. |
author_facet |
ARDISSON-ARAÚJO, D. M. P. PEREIRA, B. T. MELO, F. L. RIBEIRO, B. M. BÁO, S. N. ZANOTTO, P. M. de A. MOSCARDI, F. KITAJIMA, E. W. SOSA-GÓMEZ, D. R. WOLFF, J. L. C. |
author_role |
author |
author2 |
PEREIRA, B. T. MELO, F. L. RIBEIRO, B. M. BÁO, S. N. ZANOTTO, P. M. de A. MOSCARDI, F. KITAJIMA, E. W. SOSA-GÓMEZ, D. R. WOLFF, J. L. C. |
author2_role |
author author author author author author author author author |
dc.contributor.none.fl_str_mv |
DANIEL M. P. ARDISSON-ARAÚJO, UNB; BRUNA T. PEREIRA, USP; FERNANDO L. MELO, UNB; BERGMANN M. RIBEIRO, UNB; SÔNIA N. BÁO, UNB; PAOLO M. de A. ZANOTTO, USP; FLÁVIO MOSCARDI, CNPSo - In memorian; ELLIOT W. KITAJIMA, ESALQ - USP; DANIEL RICARDO SÓSA GOMEZ, CNPSO; JOSÉ L. C. WOLFF, Universidade Presbiteriana Mackenzie. |
dc.contributor.author.fl_str_mv |
ARDISSON-ARAÚJO, D. M. P. PEREIRA, B. T. MELO, F. L. RIBEIRO, B. M. BÁO, S. N. ZANOTTO, P. M. de A. MOSCARDI, F. KITAJIMA, E. W. SOSA-GÓMEZ, D. R. WOLFF, J. L. C. |
dc.subject.por.fl_str_mv |
Cana Genoma Betabaculovirus Lepidoptera |
topic |
Cana Genoma Betabaculovirus Lepidoptera |
description |
A betabaculovirus (DisaGV) was isolated from Diatraea saccharalis (Lepidoptera: Crambidae), one of the most important insect pests of the sugarcane and other monocot cultures in Brazil. The complete genome sequence of DisaGV was determined using the 454-pyrosequencing method. The genome was 98,392 bp long, which makes it the smallest lepidopteran-infecting baculovirus sequenced to date. It had a G + C content of 29.7 % encoding 125 putative open reading frames (ORF). All the 37 baculovirus core genes and a set of 19 betabaculovirus-specific genes were found. A group of 13 putative genes was not found in any other baculovirus genome sequenced so far. A phylogenetic analysis indicated that DisaGV is a member of Betabaculovirus genus and that it is a sister group to a cluster formed by ChocGV, ErelGV, PiraGV isolates, ClanGV, CaLGV, CpGV, CrleGV, AdorGV, PhopGV and EpapGV. Surprisingly, we found in the DisaGV genome a G protein-coupled receptor related to lepidopteran and other insect virus genes and a gp64 homolog, which is likely a product of horizontal gene transfer from Group 1 alphabaculoviruses. DisaGV represents a distinct lineage of the genus Betabaculovirus. It is closely related to the CpGV-related group and presents the smallest genome in size so far. Remarkably, we found a homolog of gp64, which was reported solely in group 1 alphabaculovirus genomes so far. |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-12-21T11:11:11Z 2016-12-21T11:11:11Z 2016-12-21 2016 2017-06-01T11:11:11Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/publishedVersion info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
BMC Genomics, v. 17, n. 1, 9 p., Feb. 2016. 1471-2164 http://www.alice.cnptia.embrapa.br/alice/handle/doc/1059049 10.1186/s12864-016-2408-9 |
identifier_str_mv |
BMC Genomics, v. 17, n. 1, 9 p., Feb. 2016. 1471-2164 10.1186/s12864-016-2408-9 |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1059049 |
dc.language.iso.fl_str_mv |
por |
language |
por |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
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Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
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EMBRAPA |
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EMBRAPA |
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Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
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Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
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Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
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1794503430116474880 |