A betabaculovirus encoding a gp64 homolog.

Detalhes bibliográficos
Autor(a) principal: ARDISSON-ARAÚJO, D. M. P.
Data de Publicação: 2016
Outros Autores: PEREIRA, B. T., MELO, F. L., RIBEIRO, B. M., BÁO, S. N., ZANOTTO, P. M. de A., MOSCARDI, F., KITAJIMA, E. W., SOSA-GÓMEZ, D. R., WOLFF, J. L. C.
Tipo de documento: Artigo
Idioma: por
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1059049
Resumo: A betabaculovirus (DisaGV) was isolated from Diatraea saccharalis (Lepidoptera: Crambidae), one of the most important insect pests of the sugarcane and other monocot cultures in Brazil. The complete genome sequence of DisaGV was determined using the 454-pyrosequencing method. The genome was 98,392 bp long, which makes it the smallest lepidopteran-infecting baculovirus sequenced to date. It had a G + C content of 29.7 % encoding 125 putative open reading frames (ORF). All the 37 baculovirus core genes and a set of 19 betabaculovirus-specific genes were found. A group of 13 putative genes was not found in any other baculovirus genome sequenced so far. A phylogenetic analysis indicated that DisaGV is a member of Betabaculovirus genus and that it is a sister group to a cluster formed by ChocGV, ErelGV, PiraGV isolates, ClanGV, CaLGV, CpGV, CrleGV, AdorGV, PhopGV and EpapGV. Surprisingly, we found in the DisaGV genome a G protein-coupled receptor related to lepidopteran and other insect virus genes and a gp64 homolog, which is likely a product of horizontal gene transfer from Group 1 alphabaculoviruses. DisaGV represents a distinct lineage of the genus Betabaculovirus. It is closely related to the CpGV-related group and presents the smallest genome in size so far. Remarkably, we found a homolog of gp64, which was reported solely in group 1 alphabaculovirus genomes so far.
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spelling A betabaculovirus encoding a gp64 homolog.CanaGenomaBetabaculovirusLepidopteraA betabaculovirus (DisaGV) was isolated from Diatraea saccharalis (Lepidoptera: Crambidae), one of the most important insect pests of the sugarcane and other monocot cultures in Brazil. The complete genome sequence of DisaGV was determined using the 454-pyrosequencing method. The genome was 98,392 bp long, which makes it the smallest lepidopteran-infecting baculovirus sequenced to date. It had a G + C content of 29.7 % encoding 125 putative open reading frames (ORF). All the 37 baculovirus core genes and a set of 19 betabaculovirus-specific genes were found. A group of 13 putative genes was not found in any other baculovirus genome sequenced so far. A phylogenetic analysis indicated that DisaGV is a member of Betabaculovirus genus and that it is a sister group to a cluster formed by ChocGV, ErelGV, PiraGV isolates, ClanGV, CaLGV, CpGV, CrleGV, AdorGV, PhopGV and EpapGV. Surprisingly, we found in the DisaGV genome a G protein-coupled receptor related to lepidopteran and other insect virus genes and a gp64 homolog, which is likely a product of horizontal gene transfer from Group 1 alphabaculoviruses. DisaGV represents a distinct lineage of the genus Betabaculovirus. It is closely related to the CpGV-related group and presents the smallest genome in size so far. Remarkably, we found a homolog of gp64, which was reported solely in group 1 alphabaculovirus genomes so far.DANIEL M. P. ARDISSON-ARAÚJO, UNB; BRUNA T. PEREIRA, USP; FERNANDO L. MELO, UNB; BERGMANN M. RIBEIRO, UNB; SÔNIA N. BÁO, UNB; PAOLO M. de A. ZANOTTO, USP; FLÁVIO MOSCARDI, CNPSo - In memorian; ELLIOT W. KITAJIMA, ESALQ - USP; DANIEL RICARDO SÓSA GOMEZ, CNPSO; JOSÉ L. C. WOLFF, Universidade Presbiteriana Mackenzie.ARDISSON-ARAÚJO, D. M. P.PEREIRA, B. T.MELO, F. L.RIBEIRO, B. M.BÁO, S. N.ZANOTTO, P. M. de A.MOSCARDI, F.KITAJIMA, E. W.SOSA-GÓMEZ, D. R.WOLFF, J. L. C.2016-12-21T11:11:11Z2016-12-21T11:11:11Z2016-12-2120162017-06-01T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleBMC Genomics, v. 17, n. 1, 9 p., Feb. 2016.1471-2164http://www.alice.cnptia.embrapa.br/alice/handle/doc/105904910.1186/s12864-016-2408-9porinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T03:56:47Zoai:www.alice.cnptia.embrapa.br:doc/1059049Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T03:56:47falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T03:56:47Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv A betabaculovirus encoding a gp64 homolog.
title A betabaculovirus encoding a gp64 homolog.
spellingShingle A betabaculovirus encoding a gp64 homolog.
ARDISSON-ARAÚJO, D. M. P.
Cana
Genoma
Betabaculovirus
Lepidoptera
title_short A betabaculovirus encoding a gp64 homolog.
title_full A betabaculovirus encoding a gp64 homolog.
title_fullStr A betabaculovirus encoding a gp64 homolog.
title_full_unstemmed A betabaculovirus encoding a gp64 homolog.
title_sort A betabaculovirus encoding a gp64 homolog.
author ARDISSON-ARAÚJO, D. M. P.
author_facet ARDISSON-ARAÚJO, D. M. P.
PEREIRA, B. T.
MELO, F. L.
RIBEIRO, B. M.
BÁO, S. N.
ZANOTTO, P. M. de A.
MOSCARDI, F.
KITAJIMA, E. W.
SOSA-GÓMEZ, D. R.
WOLFF, J. L. C.
author_role author
author2 PEREIRA, B. T.
MELO, F. L.
RIBEIRO, B. M.
BÁO, S. N.
ZANOTTO, P. M. de A.
MOSCARDI, F.
KITAJIMA, E. W.
SOSA-GÓMEZ, D. R.
WOLFF, J. L. C.
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv DANIEL M. P. ARDISSON-ARAÚJO, UNB; BRUNA T. PEREIRA, USP; FERNANDO L. MELO, UNB; BERGMANN M. RIBEIRO, UNB; SÔNIA N. BÁO, UNB; PAOLO M. de A. ZANOTTO, USP; FLÁVIO MOSCARDI, CNPSo - In memorian; ELLIOT W. KITAJIMA, ESALQ - USP; DANIEL RICARDO SÓSA GOMEZ, CNPSO; JOSÉ L. C. WOLFF, Universidade Presbiteriana Mackenzie.
dc.contributor.author.fl_str_mv ARDISSON-ARAÚJO, D. M. P.
PEREIRA, B. T.
MELO, F. L.
RIBEIRO, B. M.
BÁO, S. N.
ZANOTTO, P. M. de A.
MOSCARDI, F.
KITAJIMA, E. W.
SOSA-GÓMEZ, D. R.
WOLFF, J. L. C.
dc.subject.por.fl_str_mv Cana
Genoma
Betabaculovirus
Lepidoptera
topic Cana
Genoma
Betabaculovirus
Lepidoptera
description A betabaculovirus (DisaGV) was isolated from Diatraea saccharalis (Lepidoptera: Crambidae), one of the most important insect pests of the sugarcane and other monocot cultures in Brazil. The complete genome sequence of DisaGV was determined using the 454-pyrosequencing method. The genome was 98,392 bp long, which makes it the smallest lepidopteran-infecting baculovirus sequenced to date. It had a G + C content of 29.7 % encoding 125 putative open reading frames (ORF). All the 37 baculovirus core genes and a set of 19 betabaculovirus-specific genes were found. A group of 13 putative genes was not found in any other baculovirus genome sequenced so far. A phylogenetic analysis indicated that DisaGV is a member of Betabaculovirus genus and that it is a sister group to a cluster formed by ChocGV, ErelGV, PiraGV isolates, ClanGV, CaLGV, CpGV, CrleGV, AdorGV, PhopGV and EpapGV. Surprisingly, we found in the DisaGV genome a G protein-coupled receptor related to lepidopteran and other insect virus genes and a gp64 homolog, which is likely a product of horizontal gene transfer from Group 1 alphabaculoviruses. DisaGV represents a distinct lineage of the genus Betabaculovirus. It is closely related to the CpGV-related group and presents the smallest genome in size so far. Remarkably, we found a homolog of gp64, which was reported solely in group 1 alphabaculovirus genomes so far.
publishDate 2016
dc.date.none.fl_str_mv 2016-12-21T11:11:11Z
2016-12-21T11:11:11Z
2016-12-21
2016
2017-06-01T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv BMC Genomics, v. 17, n. 1, 9 p., Feb. 2016.
1471-2164
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1059049
10.1186/s12864-016-2408-9
identifier_str_mv BMC Genomics, v. 17, n. 1, 9 p., Feb. 2016.
1471-2164
10.1186/s12864-016-2408-9
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1059049
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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