Method for obtaining high-resolution proteomic analysis from pericarps of guarana.

Detalhes bibliográficos
Autor(a) principal: SOUZA, A. L.
Data de Publicação: 2014
Outros Autores: ANGELO, P. C. da S., NOGUEIRA, P. P. O., GONÇALVES, J. F. C., FRANCO, A. M., ASTOLFI-FILHO, S., LÓPEZ-LOZANO, J. L., ANDRADE, E. V.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/996859
http://dx.doi.org/10.4238/2014.September.29.14
Resumo: Guarana has great agricultural potential and is largely used therapeutically and in the production of non-alcoholic energy drinks. Genomic and proteomic studies are crucial to identify proteins that play central roles in the maintenance and viability of fruits, as well as to identify proteins related to the main metabolic pathways. However, the success of any protein analysis starts with the protein extract preparation, which needs to offer an extract that is free of contaminants. This study aimed to evaluate different extraction methods to obtain high-quantity and high-quality extracts that are compatible with analysis by 2-dimensional electrophoresis and tandem mass spectrometry protein identification. Three different methods were tested: trichloroacetic acid (TCA)/acetone, sodium dodecyl sulfate (SDS)/phenol, and polyvinylpolypyrrolidone (PVPP)/SDS/phenol.
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spelling Method for obtaining high-resolution proteomic analysis from pericarps of guarana.Plant proteomicsTwo-dimensional electrophoresisGuaranáPaullinia CupanapolyphenolsGuarana has great agricultural potential and is largely used therapeutically and in the production of non-alcoholic energy drinks. Genomic and proteomic studies are crucial to identify proteins that play central roles in the maintenance and viability of fruits, as well as to identify proteins related to the main metabolic pathways. However, the success of any protein analysis starts with the protein extract preparation, which needs to offer an extract that is free of contaminants. This study aimed to evaluate different extraction methods to obtain high-quantity and high-quality extracts that are compatible with analysis by 2-dimensional electrophoresis and tandem mass spectrometry protein identification. Three different methods were tested: trichloroacetic acid (TCA)/acetone, sodium dodecyl sulfate (SDS)/phenol, and polyvinylpolypyrrolidone (PVPP)/SDS/phenol.A. L. Souza, UFAM; PAULA CRISTINA DA SILVA ANGELO, CPAA; P. P. O. Nogueira, FIOCRUZ; J. F. C. Gonçalves, INPA; A. M. Franco, INPA; S. Astolfi-Filho, UFAM; J. L. López-Lozano, Fundação de Medicina Tropical do Amazonas; E. V. Andrade, UFAM.SOUZA, A. L.ANGELO, P. C. da S.NOGUEIRA, P. P. O.GONÇALVES, J. F. C.FRANCO, A. M.ASTOLFI-FILHO, S.LÓPEZ-LOZANO, J. L.ANDRADE, E. V.2014-10-09T08:18:15Z2014-10-09T08:18:15Z2014-10-0820142014-10-09T08:18:15Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Research, v. 13, n. 3, p. 8014-8024, 2014.http://www.alice.cnptia.embrapa.br/alice/handle/doc/996859http://dx.doi.org/10.4238/2014.September.29.14enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T00:22:15Zoai:www.alice.cnptia.embrapa.br:doc/996859Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T00:22:15falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T00:22:15Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Method for obtaining high-resolution proteomic analysis from pericarps of guarana.
title Method for obtaining high-resolution proteomic analysis from pericarps of guarana.
spellingShingle Method for obtaining high-resolution proteomic analysis from pericarps of guarana.
SOUZA, A. L.
Plant proteomics
Two-dimensional electrophoresis
Guaraná
Paullinia Cupana
polyphenols
title_short Method for obtaining high-resolution proteomic analysis from pericarps of guarana.
title_full Method for obtaining high-resolution proteomic analysis from pericarps of guarana.
title_fullStr Method for obtaining high-resolution proteomic analysis from pericarps of guarana.
title_full_unstemmed Method for obtaining high-resolution proteomic analysis from pericarps of guarana.
title_sort Method for obtaining high-resolution proteomic analysis from pericarps of guarana.
author SOUZA, A. L.
author_facet SOUZA, A. L.
ANGELO, P. C. da S.
NOGUEIRA, P. P. O.
GONÇALVES, J. F. C.
FRANCO, A. M.
ASTOLFI-FILHO, S.
LÓPEZ-LOZANO, J. L.
ANDRADE, E. V.
author_role author
author2 ANGELO, P. C. da S.
NOGUEIRA, P. P. O.
GONÇALVES, J. F. C.
FRANCO, A. M.
ASTOLFI-FILHO, S.
LÓPEZ-LOZANO, J. L.
ANDRADE, E. V.
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv A. L. Souza, UFAM; PAULA CRISTINA DA SILVA ANGELO, CPAA; P. P. O. Nogueira, FIOCRUZ; J. F. C. Gonçalves, INPA; A. M. Franco, INPA; S. Astolfi-Filho, UFAM; J. L. López-Lozano, Fundação de Medicina Tropical do Amazonas; E. V. Andrade, UFAM.
dc.contributor.author.fl_str_mv SOUZA, A. L.
ANGELO, P. C. da S.
NOGUEIRA, P. P. O.
GONÇALVES, J. F. C.
FRANCO, A. M.
ASTOLFI-FILHO, S.
LÓPEZ-LOZANO, J. L.
ANDRADE, E. V.
dc.subject.por.fl_str_mv Plant proteomics
Two-dimensional electrophoresis
Guaraná
Paullinia Cupana
polyphenols
topic Plant proteomics
Two-dimensional electrophoresis
Guaraná
Paullinia Cupana
polyphenols
description Guarana has great agricultural potential and is largely used therapeutically and in the production of non-alcoholic energy drinks. Genomic and proteomic studies are crucial to identify proteins that play central roles in the maintenance and viability of fruits, as well as to identify proteins related to the main metabolic pathways. However, the success of any protein analysis starts with the protein extract preparation, which needs to offer an extract that is free of contaminants. This study aimed to evaluate different extraction methods to obtain high-quantity and high-quality extracts that are compatible with analysis by 2-dimensional electrophoresis and tandem mass spectrometry protein identification. Three different methods were tested: trichloroacetic acid (TCA)/acetone, sodium dodecyl sulfate (SDS)/phenol, and polyvinylpolypyrrolidone (PVPP)/SDS/phenol.
publishDate 2014
dc.date.none.fl_str_mv 2014-10-09T08:18:15Z
2014-10-09T08:18:15Z
2014-10-08
2014
2014-10-09T08:18:15Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Genetics and Molecular Research, v. 13, n. 3, p. 8014-8024, 2014.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/996859
http://dx.doi.org/10.4238/2014.September.29.14
identifier_str_mv Genetics and Molecular Research, v. 13, n. 3, p. 8014-8024, 2014.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/996859
http://dx.doi.org/10.4238/2014.September.29.14
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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