Analysis of the genetic diversity of Candida isolates obtained from diabetic patients and kidney transplant recipients

Detalhes bibliográficos
Autor(a) principal: Benedetti,Volmir Pitt
Data de Publicação: 2016
Outros Autores: Savi,Daiani Cristina, Aluizio,Rodrigo, Adamoski,Douglas, Kava-Cordeiro,Vanessa, Galli-Terasawa,Lygia V, Glienke,Chirlei
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Memórias do Instituto Oswaldo Cruz
Texto Completo: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762016000700417
Resumo: Yeasts of the genus Candida have high genetic variability and are the most common opportunistic pathogenic fungi in humans. In this study, we evaluated the genetic diversity among 120 isolates of Candida spp. obtained from diabetic patients, kidney transplant recipients and patients without any immune deficiencies from Paraná state, Brazil. The analysis was performed using the ITS1-5.8S-ITS2 region and a partial sequence of 28S rDNA. In the phylogenetic analysis, we observed a consistent separation of the species C. albicans, C. dubliniensis, C. glabrata, C. tropicalis, C. parapsilosis, C. metapsilosis and C. orthopsilosis, however with low intraspecific variability. In the analysis of the C. albicans species, two clades were formed. Clade A included the largest number of isolates (91.2%) and the majority of isolates from GenBank (71.4%). The phylogenetic analysis showed low intraspecific genetic diversity, and the genetic polymorphisms between C. albicans isolates were similar to genetic divergence found in other studies performed with isolates from Brazil. This low genetic diversity of isolates can be explained by the geographic proximity of the patients evaluated. It was observed that yeast colonisation was highest in renal transplant recipients and diabetic patients and that C. albicans was the species most frequently isolated.
id FIOCRUZ-4_ddca1d393cb9678f0a5c179b74e64ad5
oai_identifier_str oai:scielo:S0074-02762016000700417
network_acronym_str FIOCRUZ-4
network_name_str Memórias do Instituto Oswaldo Cruz
spelling Analysis of the genetic diversity of Candida isolates obtained from diabetic patients and kidney transplant recipientsITS1-5.8S-ITS2 and 28S rDNACandidadiabetesrenal transplant recipientYeasts of the genus Candida have high genetic variability and are the most common opportunistic pathogenic fungi in humans. In this study, we evaluated the genetic diversity among 120 isolates of Candida spp. obtained from diabetic patients, kidney transplant recipients and patients without any immune deficiencies from Paraná state, Brazil. The analysis was performed using the ITS1-5.8S-ITS2 region and a partial sequence of 28S rDNA. In the phylogenetic analysis, we observed a consistent separation of the species C. albicans, C. dubliniensis, C. glabrata, C. tropicalis, C. parapsilosis, C. metapsilosis and C. orthopsilosis, however with low intraspecific variability. In the analysis of the C. albicans species, two clades were formed. Clade A included the largest number of isolates (91.2%) and the majority of isolates from GenBank (71.4%). The phylogenetic analysis showed low intraspecific genetic diversity, and the genetic polymorphisms between C. albicans isolates were similar to genetic divergence found in other studies performed with isolates from Brazil. This low genetic diversity of isolates can be explained by the geographic proximity of the patients evaluated. It was observed that yeast colonisation was highest in renal transplant recipients and diabetic patients and that C. albicans was the species most frequently isolated.Instituto Oswaldo Cruz, Ministério da Saúde2016-07-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://www.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762016000700417Memórias do Instituto Oswaldo Cruz v.111 n.7 2016reponame:Memórias do Instituto Oswaldo Cruzinstname:Fundação Oswaldo Cruzinstacron:FIOCRUZ10.1590/0074-02760160042info:eu-repo/semantics/openAccessBenedetti,Volmir PittSavi,Daiani CristinaAluizio,RodrigoAdamoski,DouglasKava-Cordeiro,VanessaGalli-Terasawa,Lygia VGlienke,Chirleieng2020-04-25T17:52:25Zhttp://www.scielo.br/oai/scielo-oai.php0074-02761678-8060opendoar:null2020-04-26 02:21:17.149Memórias do Instituto Oswaldo Cruz - Fundação Oswaldo Cruztrue
dc.title.none.fl_str_mv Analysis of the genetic diversity of Candida isolates obtained from diabetic patients and kidney transplant recipients
title Analysis of the genetic diversity of Candida isolates obtained from diabetic patients and kidney transplant recipients
spellingShingle Analysis of the genetic diversity of Candida isolates obtained from diabetic patients and kidney transplant recipients
Benedetti,Volmir Pitt
ITS1-5.8S-ITS2 and 28S rDNA
Candida
diabetes
renal transplant recipient
title_short Analysis of the genetic diversity of Candida isolates obtained from diabetic patients and kidney transplant recipients
title_full Analysis of the genetic diversity of Candida isolates obtained from diabetic patients and kidney transplant recipients
title_fullStr Analysis of the genetic diversity of Candida isolates obtained from diabetic patients and kidney transplant recipients
title_full_unstemmed Analysis of the genetic diversity of Candida isolates obtained from diabetic patients and kidney transplant recipients
title_sort Analysis of the genetic diversity of Candida isolates obtained from diabetic patients and kidney transplant recipients
author Benedetti,Volmir Pitt
author_facet Benedetti,Volmir Pitt
Savi,Daiani Cristina
Aluizio,Rodrigo
Adamoski,Douglas
Kava-Cordeiro,Vanessa
Galli-Terasawa,Lygia V
Glienke,Chirlei
author_role author
author2 Savi,Daiani Cristina
Aluizio,Rodrigo
Adamoski,Douglas
Kava-Cordeiro,Vanessa
Galli-Terasawa,Lygia V
Glienke,Chirlei
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Benedetti,Volmir Pitt
Savi,Daiani Cristina
Aluizio,Rodrigo
Adamoski,Douglas
Kava-Cordeiro,Vanessa
Galli-Terasawa,Lygia V
Glienke,Chirlei
dc.subject.por.fl_str_mv ITS1-5.8S-ITS2 and 28S rDNA
Candida
diabetes
renal transplant recipient
topic ITS1-5.8S-ITS2 and 28S rDNA
Candida
diabetes
renal transplant recipient
dc.description.none.fl_txt_mv Yeasts of the genus Candida have high genetic variability and are the most common opportunistic pathogenic fungi in humans. In this study, we evaluated the genetic diversity among 120 isolates of Candida spp. obtained from diabetic patients, kidney transplant recipients and patients without any immune deficiencies from Paraná state, Brazil. The analysis was performed using the ITS1-5.8S-ITS2 region and a partial sequence of 28S rDNA. In the phylogenetic analysis, we observed a consistent separation of the species C. albicans, C. dubliniensis, C. glabrata, C. tropicalis, C. parapsilosis, C. metapsilosis and C. orthopsilosis, however with low intraspecific variability. In the analysis of the C. albicans species, two clades were formed. Clade A included the largest number of isolates (91.2%) and the majority of isolates from GenBank (71.4%). The phylogenetic analysis showed low intraspecific genetic diversity, and the genetic polymorphisms between C. albicans isolates were similar to genetic divergence found in other studies performed with isolates from Brazil. This low genetic diversity of isolates can be explained by the geographic proximity of the patients evaluated. It was observed that yeast colonisation was highest in renal transplant recipients and diabetic patients and that C. albicans was the species most frequently isolated.
description Yeasts of the genus Candida have high genetic variability and are the most common opportunistic pathogenic fungi in humans. In this study, we evaluated the genetic diversity among 120 isolates of Candida spp. obtained from diabetic patients, kidney transplant recipients and patients without any immune deficiencies from Paraná state, Brazil. The analysis was performed using the ITS1-5.8S-ITS2 region and a partial sequence of 28S rDNA. In the phylogenetic analysis, we observed a consistent separation of the species C. albicans, C. dubliniensis, C. glabrata, C. tropicalis, C. parapsilosis, C. metapsilosis and C. orthopsilosis, however with low intraspecific variability. In the analysis of the C. albicans species, two clades were formed. Clade A included the largest number of isolates (91.2%) and the majority of isolates from GenBank (71.4%). The phylogenetic analysis showed low intraspecific genetic diversity, and the genetic polymorphisms between C. albicans isolates were similar to genetic divergence found in other studies performed with isolates from Brazil. This low genetic diversity of isolates can be explained by the geographic proximity of the patients evaluated. It was observed that yeast colonisation was highest in renal transplant recipients and diabetic patients and that C. albicans was the species most frequently isolated.
publishDate 2016
dc.date.none.fl_str_mv 2016-07-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762016000700417
url http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762016000700417
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/0074-02760160042
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Instituto Oswaldo Cruz, Ministério da Saúde
publisher.none.fl_str_mv Instituto Oswaldo Cruz, Ministério da Saúde
dc.source.none.fl_str_mv Memórias do Instituto Oswaldo Cruz v.111 n.7 2016
reponame:Memórias do Instituto Oswaldo Cruz
instname:Fundação Oswaldo Cruz
instacron:FIOCRUZ
reponame_str Memórias do Instituto Oswaldo Cruz
collection Memórias do Instituto Oswaldo Cruz
instname_str Fundação Oswaldo Cruz
instacron_str FIOCRUZ
institution FIOCRUZ
repository.name.fl_str_mv Memórias do Instituto Oswaldo Cruz - Fundação Oswaldo Cruz
repository.mail.fl_str_mv
_version_ 1669937721271910400