Molecular Identification of Cultivable Bacteria From Infected Root Canals Associated With Acute Apical Abscess

Detalhes bibliográficos
Autor(a) principal: Nóbrega,Letícia M. M.
Data de Publicação: 2016
Outros Autores: Montagner,Francisco, Ribeiro,Adriana C., Mayer,Márcia A. P., Gomes,Brenda P. F. A.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Brazilian Dental Journal
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-64402016000300318
Resumo: Abstract The objective of this study was to investigate the bacterial composition present in root canals of teeth associated with acute apical abscess by molecular identification (16S rRNA) of cultivable bacteria. Two hundred and twenty strains isolated by culture from 20 root canals were subjected to DNA extraction and amplification of the 16S rRNA gene (PCR), followed by sequencing. The resulting nucleotide sequences were compared to the GenBank database from the National Center of Biotechnology Information through BLAST. Strains not identified by sequencing were submitted to clonal analysis. The association of microbiological findings with clinical features and the association between microbial species were also investigated. Fifty-nine different cultivable bacteria were identified by 16S rRNA gene sequencing, belonging to 6 phyla, with an average number of 6 species per root canal. Molecular approaches allowed identification of 99% of isolates. The most frequently identified bacteria were Prevotella spp., Pseudoramibacter alactolyticus, Parvimonas micra, Dialister invisus, Filifactor alocis, and Peptostreptococcus stomatis. Positive association was found between Prevotella buccae and Pseudoramibacter alactolyticus and between Parvimonas micra and Prevotella nigrescens (both p<0.05). It was concluded that the microbiota of infected root canals associated with acute apical abscess is diverse and heterogeneous, composed mainly of anaerobic Gram-negative bacteria, with the great majority belonging to the phyla Firmicutes and Bacteroidetes.
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spelling Molecular Identification of Cultivable Bacteria From Infected Root Canals Associated With Acute Apical Abscessroot canalsendodonticsmicroorganismsabscesssequencing.Abstract The objective of this study was to investigate the bacterial composition present in root canals of teeth associated with acute apical abscess by molecular identification (16S rRNA) of cultivable bacteria. Two hundred and twenty strains isolated by culture from 20 root canals were subjected to DNA extraction and amplification of the 16S rRNA gene (PCR), followed by sequencing. The resulting nucleotide sequences were compared to the GenBank database from the National Center of Biotechnology Information through BLAST. Strains not identified by sequencing were submitted to clonal analysis. The association of microbiological findings with clinical features and the association between microbial species were also investigated. Fifty-nine different cultivable bacteria were identified by 16S rRNA gene sequencing, belonging to 6 phyla, with an average number of 6 species per root canal. Molecular approaches allowed identification of 99% of isolates. The most frequently identified bacteria were Prevotella spp., Pseudoramibacter alactolyticus, Parvimonas micra, Dialister invisus, Filifactor alocis, and Peptostreptococcus stomatis. Positive association was found between Prevotella buccae and Pseudoramibacter alactolyticus and between Parvimonas micra and Prevotella nigrescens (both p<0.05). It was concluded that the microbiota of infected root canals associated with acute apical abscess is diverse and heterogeneous, composed mainly of anaerobic Gram-negative bacteria, with the great majority belonging to the phyla Firmicutes and Bacteroidetes.Fundação Odontológica de Ribeirão Preto2016-06-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-64402016000300318Brazilian Dental Journal v.27 n.3 2016reponame:Brazilian Dental Journalinstname:Fundação Odontológica de Ribeirão Preto (FUNORP)instacron:FUNORP10.1590/0103-6440201600715info:eu-repo/semantics/openAccessNóbrega,Letícia M. M.Montagner,FranciscoRibeiro,Adriana C.Mayer,Márcia A. P.Gomes,Brenda P. F. A.eng2016-05-18T00:00:00Zoai:scielo:S0103-64402016000300318Revistahttps://www.scielo.br/j/bdj/https://old.scielo.br/oai/scielo-oai.phpbdj@forp.usp.br||sergio@fosjc.unesp.br1806-47600103-6440opendoar:2016-05-18T00:00Brazilian Dental Journal - Fundação Odontológica de Ribeirão Preto (FUNORP)false
dc.title.none.fl_str_mv Molecular Identification of Cultivable Bacteria From Infected Root Canals Associated With Acute Apical Abscess
title Molecular Identification of Cultivable Bacteria From Infected Root Canals Associated With Acute Apical Abscess
spellingShingle Molecular Identification of Cultivable Bacteria From Infected Root Canals Associated With Acute Apical Abscess
Nóbrega,Letícia M. M.
root canals
endodontics
microorganisms
abscess
sequencing.
title_short Molecular Identification of Cultivable Bacteria From Infected Root Canals Associated With Acute Apical Abscess
title_full Molecular Identification of Cultivable Bacteria From Infected Root Canals Associated With Acute Apical Abscess
title_fullStr Molecular Identification of Cultivable Bacteria From Infected Root Canals Associated With Acute Apical Abscess
title_full_unstemmed Molecular Identification of Cultivable Bacteria From Infected Root Canals Associated With Acute Apical Abscess
title_sort Molecular Identification of Cultivable Bacteria From Infected Root Canals Associated With Acute Apical Abscess
author Nóbrega,Letícia M. M.
author_facet Nóbrega,Letícia M. M.
Montagner,Francisco
Ribeiro,Adriana C.
Mayer,Márcia A. P.
Gomes,Brenda P. F. A.
author_role author
author2 Montagner,Francisco
Ribeiro,Adriana C.
Mayer,Márcia A. P.
Gomes,Brenda P. F. A.
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Nóbrega,Letícia M. M.
Montagner,Francisco
Ribeiro,Adriana C.
Mayer,Márcia A. P.
Gomes,Brenda P. F. A.
dc.subject.por.fl_str_mv root canals
endodontics
microorganisms
abscess
sequencing.
topic root canals
endodontics
microorganisms
abscess
sequencing.
description Abstract The objective of this study was to investigate the bacterial composition present in root canals of teeth associated with acute apical abscess by molecular identification (16S rRNA) of cultivable bacteria. Two hundred and twenty strains isolated by culture from 20 root canals were subjected to DNA extraction and amplification of the 16S rRNA gene (PCR), followed by sequencing. The resulting nucleotide sequences were compared to the GenBank database from the National Center of Biotechnology Information through BLAST. Strains not identified by sequencing were submitted to clonal analysis. The association of microbiological findings with clinical features and the association between microbial species were also investigated. Fifty-nine different cultivable bacteria were identified by 16S rRNA gene sequencing, belonging to 6 phyla, with an average number of 6 species per root canal. Molecular approaches allowed identification of 99% of isolates. The most frequently identified bacteria were Prevotella spp., Pseudoramibacter alactolyticus, Parvimonas micra, Dialister invisus, Filifactor alocis, and Peptostreptococcus stomatis. Positive association was found between Prevotella buccae and Pseudoramibacter alactolyticus and between Parvimonas micra and Prevotella nigrescens (both p<0.05). It was concluded that the microbiota of infected root canals associated with acute apical abscess is diverse and heterogeneous, composed mainly of anaerobic Gram-negative bacteria, with the great majority belonging to the phyla Firmicutes and Bacteroidetes.
publishDate 2016
dc.date.none.fl_str_mv 2016-06-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-64402016000300318
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-64402016000300318
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/0103-6440201600715
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Fundação Odontológica de Ribeirão Preto
publisher.none.fl_str_mv Fundação Odontológica de Ribeirão Preto
dc.source.none.fl_str_mv Brazilian Dental Journal v.27 n.3 2016
reponame:Brazilian Dental Journal
instname:Fundação Odontológica de Ribeirão Preto (FUNORP)
instacron:FUNORP
instname_str Fundação Odontológica de Ribeirão Preto (FUNORP)
instacron_str FUNORP
institution FUNORP
reponame_str Brazilian Dental Journal
collection Brazilian Dental Journal
repository.name.fl_str_mv Brazilian Dental Journal - Fundação Odontológica de Ribeirão Preto (FUNORP)
repository.mail.fl_str_mv bdj@forp.usp.br||sergio@fosjc.unesp.br
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