Successful amplification of mitochondrial DNA from dentin of the bottlenose dolphin Tursiops truncatus

Detalhes bibliográficos
Autor(a) principal: Weber, Laura Isabel
Data de Publicação: 2007
Outros Autores: Luca, Michelle Jaccottet de, Barreto, André Silva, Souza, Tiago Tolentino de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da FURG (RI FURG)
Texto Completo: http://repositorio.furg.br/handle/1/4252
Resumo: Twenty-four teeth of Tursiops truncatus from the collection of the Marine Mammals Laborato ry (FURG-RS) were analysed for their potential as DNA source for population genetic and taxonomic studies. All teeth were submitted to decontamination, grinding and demineralisation processes. Dentin powder was weighed for DNA extraction, which was evaluated by the amplification of two mitochondrial genes through PCR using universal primers. Cytochrome-b gene was amplified successfully. PCR products showed concentrations of 3-12 ng/μl for dentin powder, which was positively correlated to the quantity of dentin pow der used for DNA extraction. To rule out contamination a SSCP was carried out including positive controls, and samples of humans involved in the analysis. The SSCP patterns for T. truncatus differed from all others, showing also polymorphism for the region. It was concluded that dentin was a good source of mtDNA for genetic studies in dolphins.
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spelling Successful amplification of mitochondrial DNA from dentin of the bottlenose dolphin Tursiops truncatusDolphinsTursiopsMuseum specimensDentinMitochondrial DNACyto chrome-bTwenty-four teeth of Tursiops truncatus from the collection of the Marine Mammals Laborato ry (FURG-RS) were analysed for their potential as DNA source for population genetic and taxonomic studies. All teeth were submitted to decontamination, grinding and demineralisation processes. Dentin powder was weighed for DNA extraction, which was evaluated by the amplification of two mitochondrial genes through PCR using universal primers. Cytochrome-b gene was amplified successfully. PCR products showed concentrations of 3-12 ng/μl for dentin powder, which was positively correlated to the quantity of dentin pow der used for DNA extraction. To rule out contamination a SSCP was carried out including positive controls, and samples of humans involved in the analysis. The SSCP patterns for T. truncatus differed from all others, showing also polymorphism for the region. It was concluded that dentin was a good source of mtDNA for genetic studies in dolphins.Vinte e quatro amostras de material dentário de Tursiops truncatus oriundas da coleção do Laboratório de Mamíferos Marinhos (FURG-RS) foram avaliadas para determinar seu potencial como fonte de DNA para estudos genéticopopulacionais e sistemáticos. Todos os dentes foram submetidos a processos de desinfecção, trituração e desmineralização. A dentina obtida foi pesada previamente à extração de DNA, a qual foi avaliada através da amplificação de dois genes mitocondriais, através da técnica de PCR (Reação em Cadeia da Polimerase), utilizando oligonucleotídeos iniciadores universais. Obtevese sucesso apenas na amplificação do gene Citocromo-b. Destes produtos obtiveram-se concentrações de 3-12 ng/ml para o material dentário, observando-se uma relação linear positiva com a quantidade em gramas utilizada na extração de DNA. Com o objetivo de eliminar a possibilidade de contaminação foi realizada uma análise SSCP (Polimorfismo Conformacional de Fita Simples) incluindo os controles positivos e amostras de pessoas envolvidas nas análises. Os padrões SSCP de T. truncatus obtidos diferiram das outras amostras, observando-se polimorfismo na região para os exemplares de T. truncatus analisados. Concluiu-se que é possível obter DNA mitocondrial para estudos genético-populacionais e taxonômicos a partir de material dentário de golfinhos.2013-12-02T12:33:49Z2013-12-02T12:33:49Z2007info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfWEBER, Laura Isabel et al. Successful amplification of mitochondrial DNA from dentin of the bottlenose dolphin Tursiops truncatus. Brazilian Archives of Biology and Technology, v. 50, n. 1, p. 11-19, 2007. Disponível em: <http://www.scielo.br/pdf/babt/v50n1/02.pdf>. Acesso em: 23 nov. 2013.1516-8913http://repositorio.furg.br/handle/1/4252engWeber, Laura IsabelLuca, Michelle Jaccottet deBarreto, André SilvaSouza, Tiago Tolentino deinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da FURG (RI FURG)instname:Universidade Federal do Rio Grande (FURG)instacron:FURG2013-12-02T12:48:25Zoai:repositorio.furg.br:1/4252Repositório InstitucionalPUBhttps://repositorio.furg.br/oai/request || http://200.19.254.174/oai/requestopendoar:2013-12-02T12:48:25Repositório Institucional da FURG (RI FURG) - Universidade Federal do Rio Grande (FURG)false
dc.title.none.fl_str_mv Successful amplification of mitochondrial DNA from dentin of the bottlenose dolphin Tursiops truncatus
title Successful amplification of mitochondrial DNA from dentin of the bottlenose dolphin Tursiops truncatus
spellingShingle Successful amplification of mitochondrial DNA from dentin of the bottlenose dolphin Tursiops truncatus
Weber, Laura Isabel
Dolphins
Tursiops
Museum specimens
Dentin
Mitochondrial DNA
Cyto chrome-b
title_short Successful amplification of mitochondrial DNA from dentin of the bottlenose dolphin Tursiops truncatus
title_full Successful amplification of mitochondrial DNA from dentin of the bottlenose dolphin Tursiops truncatus
title_fullStr Successful amplification of mitochondrial DNA from dentin of the bottlenose dolphin Tursiops truncatus
title_full_unstemmed Successful amplification of mitochondrial DNA from dentin of the bottlenose dolphin Tursiops truncatus
title_sort Successful amplification of mitochondrial DNA from dentin of the bottlenose dolphin Tursiops truncatus
author Weber, Laura Isabel
author_facet Weber, Laura Isabel
Luca, Michelle Jaccottet de
Barreto, André Silva
Souza, Tiago Tolentino de
author_role author
author2 Luca, Michelle Jaccottet de
Barreto, André Silva
Souza, Tiago Tolentino de
author2_role author
author
author
dc.contributor.author.fl_str_mv Weber, Laura Isabel
Luca, Michelle Jaccottet de
Barreto, André Silva
Souza, Tiago Tolentino de
dc.subject.por.fl_str_mv Dolphins
Tursiops
Museum specimens
Dentin
Mitochondrial DNA
Cyto chrome-b
topic Dolphins
Tursiops
Museum specimens
Dentin
Mitochondrial DNA
Cyto chrome-b
description Twenty-four teeth of Tursiops truncatus from the collection of the Marine Mammals Laborato ry (FURG-RS) were analysed for their potential as DNA source for population genetic and taxonomic studies. All teeth were submitted to decontamination, grinding and demineralisation processes. Dentin powder was weighed for DNA extraction, which was evaluated by the amplification of two mitochondrial genes through PCR using universal primers. Cytochrome-b gene was amplified successfully. PCR products showed concentrations of 3-12 ng/μl for dentin powder, which was positively correlated to the quantity of dentin pow der used for DNA extraction. To rule out contamination a SSCP was carried out including positive controls, and samples of humans involved in the analysis. The SSCP patterns for T. truncatus differed from all others, showing also polymorphism for the region. It was concluded that dentin was a good source of mtDNA for genetic studies in dolphins.
publishDate 2007
dc.date.none.fl_str_mv 2007
2013-12-02T12:33:49Z
2013-12-02T12:33:49Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv WEBER, Laura Isabel et al. Successful amplification of mitochondrial DNA from dentin of the bottlenose dolphin Tursiops truncatus. Brazilian Archives of Biology and Technology, v. 50, n. 1, p. 11-19, 2007. Disponível em: <http://www.scielo.br/pdf/babt/v50n1/02.pdf>. Acesso em: 23 nov. 2013.
1516-8913
http://repositorio.furg.br/handle/1/4252
identifier_str_mv WEBER, Laura Isabel et al. Successful amplification of mitochondrial DNA from dentin of the bottlenose dolphin Tursiops truncatus. Brazilian Archives of Biology and Technology, v. 50, n. 1, p. 11-19, 2007. Disponível em: <http://www.scielo.br/pdf/babt/v50n1/02.pdf>. Acesso em: 23 nov. 2013.
1516-8913
url http://repositorio.furg.br/handle/1/4252
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv reponame:Repositório Institucional da FURG (RI FURG)
instname:Universidade Federal do Rio Grande (FURG)
instacron:FURG
instname_str Universidade Federal do Rio Grande (FURG)
instacron_str FURG
institution FURG
reponame_str Repositório Institucional da FURG (RI FURG)
collection Repositório Institucional da FURG (RI FURG)
repository.name.fl_str_mv Repositório Institucional da FURG (RI FURG) - Universidade Federal do Rio Grande (FURG)
repository.mail.fl_str_mv
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