Diversity of citrus gummosis in São Paulo State, Brazil

Detalhes bibliográficos
Autor(a) principal: Urashima,Alfredo Seiiti
Data de Publicação: 2016
Outros Autores: Mistura,Tatiane de Fátima, Gonçalves,Cassiara Regina Noventa Correa Bueno
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Summa phytopathologica (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-54052016000300209
Resumo: ABSTRACT Citrus gummosis is an important disease because it causes the death of young plants, resulting in their replacement, a costly operation. Its causal agents are different species of Phytophthora. Dissemination of these microorganisms occurs mainly by contaminated nursery trees. Differences in aggressiveness, competitiveness and response to fungicides varied among species of this pathogen. Therefore, this study aimed to examine diversity among citrus isolates of Phytophthora from two different origins in São Paulo State. Thirty isolates from citrus nursery trees from 13 municipalities and 11 from seven commercial orchards were analyzed. Interspecific diversity was performed by species-specific primers and sequencing of the ITS region. Subsequently, intraspecific diversity was carried out with 16 RAPD primers and clustering analysis of UPGMA, using the Dice coefficient. Our data identified only P. nicotianae from either substrates or commercial fields. Isolates clustered into two genetically distinct populations. Genetically similar isolates were also found. The existence of these clonal lineages among isolates from geographically distinct nursery trees suggests an efficient dissemination mechanism. This was the first study to examine the diversity of Phytophthora in citrus from substrates of nursery trees in Brazil.
id GPF-1_085b07affaed0755ece72acff5a48ff8
oai_identifier_str oai:scielo:S0100-54052016000300209
network_acronym_str GPF-1
network_name_str Summa phytopathologica (Online)
repository_id_str
spelling Diversity of citrus gummosis in São Paulo State, BrazilPhytophthora spp.RAPDPCRvariabilityABSTRACT Citrus gummosis is an important disease because it causes the death of young plants, resulting in their replacement, a costly operation. Its causal agents are different species of Phytophthora. Dissemination of these microorganisms occurs mainly by contaminated nursery trees. Differences in aggressiveness, competitiveness and response to fungicides varied among species of this pathogen. Therefore, this study aimed to examine diversity among citrus isolates of Phytophthora from two different origins in São Paulo State. Thirty isolates from citrus nursery trees from 13 municipalities and 11 from seven commercial orchards were analyzed. Interspecific diversity was performed by species-specific primers and sequencing of the ITS region. Subsequently, intraspecific diversity was carried out with 16 RAPD primers and clustering analysis of UPGMA, using the Dice coefficient. Our data identified only P. nicotianae from either substrates or commercial fields. Isolates clustered into two genetically distinct populations. Genetically similar isolates were also found. The existence of these clonal lineages among isolates from geographically distinct nursery trees suggests an efficient dissemination mechanism. This was the first study to examine the diversity of Phytophthora in citrus from substrates of nursery trees in Brazil.Grupo Paulista de Fitopatologia2016-09-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-54052016000300209Summa Phytopathologica v.42 n.3 2016reponame:Summa phytopathologica (Online)instname:Grupo Paulista de Fitopatologiainstacron:GPF10.1590/0100-5405/2171info:eu-repo/semantics/openAccessUrashima,Alfredo SeiitiMistura,Tatiane de FátimaGonçalves,Cassiara Regina Noventa Correa Buenoeng2016-09-12T00:00:00Zoai:scielo:S0100-54052016000300209Revistahttp://www.scielo.br/sphttps://old.scielo.br/oai/scielo-oai.phpsumma@fca.unesp.br1980-54540100-5405opendoar:2016-09-12T00:00Summa phytopathologica (Online) - Grupo Paulista de Fitopatologiafalse
dc.title.none.fl_str_mv Diversity of citrus gummosis in São Paulo State, Brazil
title Diversity of citrus gummosis in São Paulo State, Brazil
spellingShingle Diversity of citrus gummosis in São Paulo State, Brazil
Urashima,Alfredo Seiiti
Phytophthora spp.
RAPD
PCR
variability
title_short Diversity of citrus gummosis in São Paulo State, Brazil
title_full Diversity of citrus gummosis in São Paulo State, Brazil
title_fullStr Diversity of citrus gummosis in São Paulo State, Brazil
title_full_unstemmed Diversity of citrus gummosis in São Paulo State, Brazil
title_sort Diversity of citrus gummosis in São Paulo State, Brazil
author Urashima,Alfredo Seiiti
author_facet Urashima,Alfredo Seiiti
Mistura,Tatiane de Fátima
Gonçalves,Cassiara Regina Noventa Correa Bueno
author_role author
author2 Mistura,Tatiane de Fátima
Gonçalves,Cassiara Regina Noventa Correa Bueno
author2_role author
author
dc.contributor.author.fl_str_mv Urashima,Alfredo Seiiti
Mistura,Tatiane de Fátima
Gonçalves,Cassiara Regina Noventa Correa Bueno
dc.subject.por.fl_str_mv Phytophthora spp.
RAPD
PCR
variability
topic Phytophthora spp.
RAPD
PCR
variability
description ABSTRACT Citrus gummosis is an important disease because it causes the death of young plants, resulting in their replacement, a costly operation. Its causal agents are different species of Phytophthora. Dissemination of these microorganisms occurs mainly by contaminated nursery trees. Differences in aggressiveness, competitiveness and response to fungicides varied among species of this pathogen. Therefore, this study aimed to examine diversity among citrus isolates of Phytophthora from two different origins in São Paulo State. Thirty isolates from citrus nursery trees from 13 municipalities and 11 from seven commercial orchards were analyzed. Interspecific diversity was performed by species-specific primers and sequencing of the ITS region. Subsequently, intraspecific diversity was carried out with 16 RAPD primers and clustering analysis of UPGMA, using the Dice coefficient. Our data identified only P. nicotianae from either substrates or commercial fields. Isolates clustered into two genetically distinct populations. Genetically similar isolates were also found. The existence of these clonal lineages among isolates from geographically distinct nursery trees suggests an efficient dissemination mechanism. This was the first study to examine the diversity of Phytophthora in citrus from substrates of nursery trees in Brazil.
publishDate 2016
dc.date.none.fl_str_mv 2016-09-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-54052016000300209
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-54052016000300209
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/0100-5405/2171
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Grupo Paulista de Fitopatologia
publisher.none.fl_str_mv Grupo Paulista de Fitopatologia
dc.source.none.fl_str_mv Summa Phytopathologica v.42 n.3 2016
reponame:Summa phytopathologica (Online)
instname:Grupo Paulista de Fitopatologia
instacron:GPF
instname_str Grupo Paulista de Fitopatologia
instacron_str GPF
institution GPF
reponame_str Summa phytopathologica (Online)
collection Summa phytopathologica (Online)
repository.name.fl_str_mv Summa phytopathologica (Online) - Grupo Paulista de Fitopatologia
repository.mail.fl_str_mv summa@fca.unesp.br
_version_ 1754193418500702208