Diversity of citrus gummosis in São Paulo State, Brazil
Autor(a) principal: | |
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Data de Publicação: | 2016 |
Outros Autores: | , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Summa phytopathologica (Online) |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-54052016000300209 |
Resumo: | ABSTRACT Citrus gummosis is an important disease because it causes the death of young plants, resulting in their replacement, a costly operation. Its causal agents are different species of Phytophthora. Dissemination of these microorganisms occurs mainly by contaminated nursery trees. Differences in aggressiveness, competitiveness and response to fungicides varied among species of this pathogen. Therefore, this study aimed to examine diversity among citrus isolates of Phytophthora from two different origins in São Paulo State. Thirty isolates from citrus nursery trees from 13 municipalities and 11 from seven commercial orchards were analyzed. Interspecific diversity was performed by species-specific primers and sequencing of the ITS region. Subsequently, intraspecific diversity was carried out with 16 RAPD primers and clustering analysis of UPGMA, using the Dice coefficient. Our data identified only P. nicotianae from either substrates or commercial fields. Isolates clustered into two genetically distinct populations. Genetically similar isolates were also found. The existence of these clonal lineages among isolates from geographically distinct nursery trees suggests an efficient dissemination mechanism. This was the first study to examine the diversity of Phytophthora in citrus from substrates of nursery trees in Brazil. |
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Diversity of citrus gummosis in São Paulo State, BrazilPhytophthora spp.RAPDPCRvariabilityABSTRACT Citrus gummosis is an important disease because it causes the death of young plants, resulting in their replacement, a costly operation. Its causal agents are different species of Phytophthora. Dissemination of these microorganisms occurs mainly by contaminated nursery trees. Differences in aggressiveness, competitiveness and response to fungicides varied among species of this pathogen. Therefore, this study aimed to examine diversity among citrus isolates of Phytophthora from two different origins in São Paulo State. Thirty isolates from citrus nursery trees from 13 municipalities and 11 from seven commercial orchards were analyzed. Interspecific diversity was performed by species-specific primers and sequencing of the ITS region. Subsequently, intraspecific diversity was carried out with 16 RAPD primers and clustering analysis of UPGMA, using the Dice coefficient. Our data identified only P. nicotianae from either substrates or commercial fields. Isolates clustered into two genetically distinct populations. Genetically similar isolates were also found. The existence of these clonal lineages among isolates from geographically distinct nursery trees suggests an efficient dissemination mechanism. This was the first study to examine the diversity of Phytophthora in citrus from substrates of nursery trees in Brazil.Grupo Paulista de Fitopatologia2016-09-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-54052016000300209Summa Phytopathologica v.42 n.3 2016reponame:Summa phytopathologica (Online)instname:Grupo Paulista de Fitopatologiainstacron:GPF10.1590/0100-5405/2171info:eu-repo/semantics/openAccessUrashima,Alfredo SeiitiMistura,Tatiane de FátimaGonçalves,Cassiara Regina Noventa Correa Buenoeng2016-09-12T00:00:00Zoai:scielo:S0100-54052016000300209Revistahttp://www.scielo.br/sphttps://old.scielo.br/oai/scielo-oai.phpsumma@fca.unesp.br1980-54540100-5405opendoar:2016-09-12T00:00Summa phytopathologica (Online) - Grupo Paulista de Fitopatologiafalse |
dc.title.none.fl_str_mv |
Diversity of citrus gummosis in São Paulo State, Brazil |
title |
Diversity of citrus gummosis in São Paulo State, Brazil |
spellingShingle |
Diversity of citrus gummosis in São Paulo State, Brazil Urashima,Alfredo Seiiti Phytophthora spp. RAPD PCR variability |
title_short |
Diversity of citrus gummosis in São Paulo State, Brazil |
title_full |
Diversity of citrus gummosis in São Paulo State, Brazil |
title_fullStr |
Diversity of citrus gummosis in São Paulo State, Brazil |
title_full_unstemmed |
Diversity of citrus gummosis in São Paulo State, Brazil |
title_sort |
Diversity of citrus gummosis in São Paulo State, Brazil |
author |
Urashima,Alfredo Seiiti |
author_facet |
Urashima,Alfredo Seiiti Mistura,Tatiane de Fátima Gonçalves,Cassiara Regina Noventa Correa Bueno |
author_role |
author |
author2 |
Mistura,Tatiane de Fátima Gonçalves,Cassiara Regina Noventa Correa Bueno |
author2_role |
author author |
dc.contributor.author.fl_str_mv |
Urashima,Alfredo Seiiti Mistura,Tatiane de Fátima Gonçalves,Cassiara Regina Noventa Correa Bueno |
dc.subject.por.fl_str_mv |
Phytophthora spp. RAPD PCR variability |
topic |
Phytophthora spp. RAPD PCR variability |
description |
ABSTRACT Citrus gummosis is an important disease because it causes the death of young plants, resulting in their replacement, a costly operation. Its causal agents are different species of Phytophthora. Dissemination of these microorganisms occurs mainly by contaminated nursery trees. Differences in aggressiveness, competitiveness and response to fungicides varied among species of this pathogen. Therefore, this study aimed to examine diversity among citrus isolates of Phytophthora from two different origins in São Paulo State. Thirty isolates from citrus nursery trees from 13 municipalities and 11 from seven commercial orchards were analyzed. Interspecific diversity was performed by species-specific primers and sequencing of the ITS region. Subsequently, intraspecific diversity was carried out with 16 RAPD primers and clustering analysis of UPGMA, using the Dice coefficient. Our data identified only P. nicotianae from either substrates or commercial fields. Isolates clustered into two genetically distinct populations. Genetically similar isolates were also found. The existence of these clonal lineages among isolates from geographically distinct nursery trees suggests an efficient dissemination mechanism. This was the first study to examine the diversity of Phytophthora in citrus from substrates of nursery trees in Brazil. |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-09-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-54052016000300209 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-54052016000300209 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/0100-5405/2171 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Grupo Paulista de Fitopatologia |
publisher.none.fl_str_mv |
Grupo Paulista de Fitopatologia |
dc.source.none.fl_str_mv |
Summa Phytopathologica v.42 n.3 2016 reponame:Summa phytopathologica (Online) instname:Grupo Paulista de Fitopatologia instacron:GPF |
instname_str |
Grupo Paulista de Fitopatologia |
instacron_str |
GPF |
institution |
GPF |
reponame_str |
Summa phytopathologica (Online) |
collection |
Summa phytopathologica (Online) |
repository.name.fl_str_mv |
Summa phytopathologica (Online) - Grupo Paulista de Fitopatologia |
repository.mail.fl_str_mv |
summa@fca.unesp.br |
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1754193418500702208 |