Two independent grain-length mutants mapped to a single region on the long arm of chromosome 2 in rice

Detalhes bibliográficos
Autor(a) principal: Jiang,Liangrong
Data de Publicação: 2018
Outros Autores: Zheng,Jingsheng, Zhang,Zhiyong, Chen,Xiaolong, Chen,Fangyu, Wang,Tiansheng, Huang,Yumin, Wang,Houcong, Hong,Zonglie, Huang,Rongyu
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Bragantia
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052018000300452
Resumo: ABSTRACT Grain shape in rice is a key determinant of grain appearance, yield and market value, and thus has been widely studied. Rice mutant lines with long-grain phenotypes were previously isolated from an M2 population derived from mutagenized mature pollen grains that were treated with gamma-ray irradiation for a cultivar Ma85. To understand the genetic basis underlying the long-grain trait, two mutant lines, JF171 and JF178, were crossed with the short-grain parents JF222 and Samba, generating three F2 populations. Molecular marker-based genetic analysis was employed to detect the major QTLs that affected grain length, grain width, length-to-width ratio and grain weight. Based on the data obtained for the three populations, a joint major QTL for grain length was mapped to a 4.7 Mb region between the SSR makers RM263 and RM318 on the long arm of chromosome 2. The results suggested that the two independent mutations contained in JF171 and JF178 are likely due to alterations in the same genetic region. Furthermore, we developed a BC2F2 population using JF178 and Samba and narrowed the region to 0.6 Mb. The results of the current study will be helpful to reveal the genetic basis of the above long-grain mutant lines. In general, our results provide solid genetic data to identify the unknown gene that affects grain length by map-based cloning and practice marker-assisted breeding for long-grain rice cultivars.
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spelling Two independent grain-length mutants mapped to a single region on the long arm of chromosome 2 in riceOryza sativa L.grain lengthQTL mappingmarker-assisted breedingABSTRACT Grain shape in rice is a key determinant of grain appearance, yield and market value, and thus has been widely studied. Rice mutant lines with long-grain phenotypes were previously isolated from an M2 population derived from mutagenized mature pollen grains that were treated with gamma-ray irradiation for a cultivar Ma85. To understand the genetic basis underlying the long-grain trait, two mutant lines, JF171 and JF178, were crossed with the short-grain parents JF222 and Samba, generating three F2 populations. Molecular marker-based genetic analysis was employed to detect the major QTLs that affected grain length, grain width, length-to-width ratio and grain weight. Based on the data obtained for the three populations, a joint major QTL for grain length was mapped to a 4.7 Mb region between the SSR makers RM263 and RM318 on the long arm of chromosome 2. The results suggested that the two independent mutations contained in JF171 and JF178 are likely due to alterations in the same genetic region. Furthermore, we developed a BC2F2 population using JF178 and Samba and narrowed the region to 0.6 Mb. The results of the current study will be helpful to reveal the genetic basis of the above long-grain mutant lines. In general, our results provide solid genetic data to identify the unknown gene that affects grain length by map-based cloning and practice marker-assisted breeding for long-grain rice cultivars.Instituto Agronômico de Campinas2018-09-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052018000300452Bragantia v.77 n.3 2018reponame:Bragantiainstname:Instituto Agronômico de Campinas (IAC)instacron:IAC10.1590/1678-4499.2017119info:eu-repo/semantics/openAccessJiang,LiangrongZheng,JingshengZhang,ZhiyongChen,XiaolongChen,FangyuWang,TianshengHuang,YuminWang,HoucongHong,ZonglieHuang,Rongyueng2018-08-14T00:00:00Zoai:scielo:S0006-87052018000300452Revistahttps://www.scielo.br/j/brag/https://old.scielo.br/oai/scielo-oai.phpbragantia@iac.sp.gov.br||bragantia@iac.sp.gov.br1678-44990006-8705opendoar:2018-08-14T00:00Bragantia - Instituto Agronômico de Campinas (IAC)false
dc.title.none.fl_str_mv Two independent grain-length mutants mapped to a single region on the long arm of chromosome 2 in rice
title Two independent grain-length mutants mapped to a single region on the long arm of chromosome 2 in rice
spellingShingle Two independent grain-length mutants mapped to a single region on the long arm of chromosome 2 in rice
Jiang,Liangrong
Oryza sativa L.
grain length
QTL mapping
marker-assisted breeding
title_short Two independent grain-length mutants mapped to a single region on the long arm of chromosome 2 in rice
title_full Two independent grain-length mutants mapped to a single region on the long arm of chromosome 2 in rice
title_fullStr Two independent grain-length mutants mapped to a single region on the long arm of chromosome 2 in rice
title_full_unstemmed Two independent grain-length mutants mapped to a single region on the long arm of chromosome 2 in rice
title_sort Two independent grain-length mutants mapped to a single region on the long arm of chromosome 2 in rice
author Jiang,Liangrong
author_facet Jiang,Liangrong
Zheng,Jingsheng
Zhang,Zhiyong
Chen,Xiaolong
Chen,Fangyu
Wang,Tiansheng
Huang,Yumin
Wang,Houcong
Hong,Zonglie
Huang,Rongyu
author_role author
author2 Zheng,Jingsheng
Zhang,Zhiyong
Chen,Xiaolong
Chen,Fangyu
Wang,Tiansheng
Huang,Yumin
Wang,Houcong
Hong,Zonglie
Huang,Rongyu
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Jiang,Liangrong
Zheng,Jingsheng
Zhang,Zhiyong
Chen,Xiaolong
Chen,Fangyu
Wang,Tiansheng
Huang,Yumin
Wang,Houcong
Hong,Zonglie
Huang,Rongyu
dc.subject.por.fl_str_mv Oryza sativa L.
grain length
QTL mapping
marker-assisted breeding
topic Oryza sativa L.
grain length
QTL mapping
marker-assisted breeding
description ABSTRACT Grain shape in rice is a key determinant of grain appearance, yield and market value, and thus has been widely studied. Rice mutant lines with long-grain phenotypes were previously isolated from an M2 population derived from mutagenized mature pollen grains that were treated with gamma-ray irradiation for a cultivar Ma85. To understand the genetic basis underlying the long-grain trait, two mutant lines, JF171 and JF178, were crossed with the short-grain parents JF222 and Samba, generating three F2 populations. Molecular marker-based genetic analysis was employed to detect the major QTLs that affected grain length, grain width, length-to-width ratio and grain weight. Based on the data obtained for the three populations, a joint major QTL for grain length was mapped to a 4.7 Mb region between the SSR makers RM263 and RM318 on the long arm of chromosome 2. The results suggested that the two independent mutations contained in JF171 and JF178 are likely due to alterations in the same genetic region. Furthermore, we developed a BC2F2 population using JF178 and Samba and narrowed the region to 0.6 Mb. The results of the current study will be helpful to reveal the genetic basis of the above long-grain mutant lines. In general, our results provide solid genetic data to identify the unknown gene that affects grain length by map-based cloning and practice marker-assisted breeding for long-grain rice cultivars.
publishDate 2018
dc.date.none.fl_str_mv 2018-09-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052018000300452
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052018000300452
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/1678-4499.2017119
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Instituto Agronômico de Campinas
publisher.none.fl_str_mv Instituto Agronômico de Campinas
dc.source.none.fl_str_mv Bragantia v.77 n.3 2018
reponame:Bragantia
instname:Instituto Agronômico de Campinas (IAC)
instacron:IAC
instname_str Instituto Agronômico de Campinas (IAC)
instacron_str IAC
institution IAC
reponame_str Bragantia
collection Bragantia
repository.name.fl_str_mv Bragantia - Instituto Agronômico de Campinas (IAC)
repository.mail.fl_str_mv bragantia@iac.sp.gov.br||bragantia@iac.sp.gov.br
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