G1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Digital do Instituto Evandro Chagas (Patuá) |
Texto Completo: | https://patua.iec.gov.br/handle/iec/3613 |
Resumo: | Worldwide rotaviruses A (RVA) are responsible for approximately 215,000 deaths annually among children aged <5 years. RVA G1P[8] remains associated with >50% of gastroenteritis cases in this age group. The aim of this study was to assess the genetic variability of G1P[8] strains detected in children with severe diarrhea in Belém, Pará, Brazil, during the post-rotavirus vaccine introduction era. Phylogenetic analysis clustered the VP4 and VP7 genes of 40 samples selected between 2009 and 2011 into lineages found to be different from the Rotarix® vaccine strain. A detailed investigation of their complete genotype constellations identified 2 reassortant viruses (5%), resulting from reassortments between the genogroups Wa-like and DS-1-like (G1-P[8]-I1-R2-C1-M1-A1-N1-T2-E1-H1) and Wa-like and AU-1-like (G1-P[8]-I1-R3-C1-M1-A1-N1-T1-E1-H1) genotype constellations. A comparison of the amino acid residues presents in the antigenic epitopes of VP7 and VP4, showed differences in the electrostatic charges distribution, between wild type Brazilian strains and the Rotarix® and RotaTeq® vaccine strains. These findings reflect the structural analyses of the antigenic regions of VP7 and VP4 of the RVA G1P[8] in children with gastroenteritis in Northern Brazil raising the hypothesis that structural modifications at these sites over time may account for the emergence of new strains that could possibly pose a challenge to current vaccines. |
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Santos, F. SSousa Júnior, Edivaldo CostaGuerra, Sylvia de Fátima dos SantosLobo, P. SPenha Junior, E. TLima, A. B. FVinente, C. B. GChagas, E. H. NJustino, Maria Cleonice AguiarLinhares, Alexandre da CostaMatthijnssens, JSoares, Luana da SilvaMascarenhas, Joana D'Arc Pereira2019-02-26T12:12:40Z2019-02-26T12:12:40Z2019SANTOS, F. S. et al. G1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions. Infection, Genetics and Evolution, v. 69, p. 255-266, Apr. 2019.[Epub ahead of print]1567-1348https://patua.iec.gov.br/handle/iec/361310.1016/j.meegid.2019.02.009Worldwide rotaviruses A (RVA) are responsible for approximately 215,000 deaths annually among children aged <5 years. RVA G1P[8] remains associated with >50% of gastroenteritis cases in this age group. The aim of this study was to assess the genetic variability of G1P[8] strains detected in children with severe diarrhea in Belém, Pará, Brazil, during the post-rotavirus vaccine introduction era. Phylogenetic analysis clustered the VP4 and VP7 genes of 40 samples selected between 2009 and 2011 into lineages found to be different from the Rotarix® vaccine strain. A detailed investigation of their complete genotype constellations identified 2 reassortant viruses (5%), resulting from reassortments between the genogroups Wa-like and DS-1-like (G1-P[8]-I1-R2-C1-M1-A1-N1-T2-E1-H1) and Wa-like and AU-1-like (G1-P[8]-I1-R3-C1-M1-A1-N1-T1-E1-H1) genotype constellations. A comparison of the amino acid residues presents in the antigenic epitopes of VP7 and VP4, showed differences in the electrostatic charges distribution, between wild type Brazilian strains and the Rotarix® and RotaTeq® vaccine strains. These findings reflect the structural analyses of the antigenic regions of VP7 and VP4 of the RVA G1P[8] in children with gastroenteritis in Northern Brazil raising the hypothesis that structural modifications at these sites over time may account for the emergence of new strains that could possibly pose a challenge to current vaccines.Universidade do Estado do Pará. Programa de Pós Graduação em Biologia Parasitária da Amazônia. Belém, PA, Brasil / Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Programa de Pós Graduação em Virologia. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Programa de Pós Graduação em Virologia. Ananindeua, PA, Brasil / Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Programa de Pós Graduação em Virologia. Ananindeua, PA, Brasil / Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Programa Institucional de Bolsas de Iniciação Científica. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Programa de Pós Graduação em Virologia. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Programa de Pós Graduação em Virologia. Ananindeua, PA, BrasilMinistério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, BrasilMinistério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, BrasilUniversity of Leuven. Rega Institute for Medical Research. Department of Microbiology and Immunology. aboratory of Clinical and Epidemiological Virology. Leuven, Belgium.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.engElsevierG1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regionsinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleRotavirus / patogenicidadeVacinas contra Rotavirus / administração & dosagemGastroenteriteRotavirus / genéticaGenótipoRearranjo Gênicoinfo:eu-repo/semantics/embargoedAccessreponame:Repositório Digital do Instituto Evandro Chagas (Patuá)instname:Instituto Evandro Chagas (IEC)instacron:IECORIGINALG1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions.pdfG1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions.pdfapplication/pdf551083https://patua.iec.gov.br/bitstreams/7bb60484-1987-4666-b219-0791553ece6c/downloadc9a9c128e29cac82a5d7fdf3f4e6da73MD51LICENSElicense.txtlicense.txttext/plain; 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dc.title.pt_BR.fl_str_mv |
G1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions |
title |
G1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions |
spellingShingle |
G1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions Santos, F. S Rotavirus / patogenicidade Vacinas contra Rotavirus / administração & dosagem Gastroenterite Rotavirus / genética Genótipo Rearranjo Gênico |
title_short |
G1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions |
title_full |
G1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions |
title_fullStr |
G1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions |
title_full_unstemmed |
G1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions |
title_sort |
G1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions |
author |
Santos, F. S |
author_facet |
Santos, F. S Sousa Júnior, Edivaldo Costa Guerra, Sylvia de Fátima dos Santos Lobo, P. S Penha Junior, E. T Lima, A. B. F Vinente, C. B. G Chagas, E. H. N Justino, Maria Cleonice Aguiar Linhares, Alexandre da Costa Matthijnssens, J Soares, Luana da Silva Mascarenhas, Joana D'Arc Pereira |
author_role |
author |
author2 |
Sousa Júnior, Edivaldo Costa Guerra, Sylvia de Fátima dos Santos Lobo, P. S Penha Junior, E. T Lima, A. B. F Vinente, C. B. G Chagas, E. H. N Justino, Maria Cleonice Aguiar Linhares, Alexandre da Costa Matthijnssens, J Soares, Luana da Silva Mascarenhas, Joana D'Arc Pereira |
author2_role |
author author author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Santos, F. S Sousa Júnior, Edivaldo Costa Guerra, Sylvia de Fátima dos Santos Lobo, P. S Penha Junior, E. T Lima, A. B. F Vinente, C. B. G Chagas, E. H. N Justino, Maria Cleonice Aguiar Linhares, Alexandre da Costa Matthijnssens, J Soares, Luana da Silva Mascarenhas, Joana D'Arc Pereira |
dc.subject.decsPrimary.pt_BR.fl_str_mv |
Rotavirus / patogenicidade Vacinas contra Rotavirus / administração & dosagem Gastroenterite Rotavirus / genética Genótipo Rearranjo Gênico |
topic |
Rotavirus / patogenicidade Vacinas contra Rotavirus / administração & dosagem Gastroenterite Rotavirus / genética Genótipo Rearranjo Gênico |
description |
Worldwide rotaviruses A (RVA) are responsible for approximately 215,000 deaths annually among children aged <5 years. RVA G1P[8] remains associated with >50% of gastroenteritis cases in this age group. The aim of this study was to assess the genetic variability of G1P[8] strains detected in children with severe diarrhea in Belém, Pará, Brazil, during the post-rotavirus vaccine introduction era. Phylogenetic analysis clustered the VP4 and VP7 genes of 40 samples selected between 2009 and 2011 into lineages found to be different from the Rotarix® vaccine strain. A detailed investigation of their complete genotype constellations identified 2 reassortant viruses (5%), resulting from reassortments between the genogroups Wa-like and DS-1-like (G1-P[8]-I1-R2-C1-M1-A1-N1-T2-E1-H1) and Wa-like and AU-1-like (G1-P[8]-I1-R3-C1-M1-A1-N1-T1-E1-H1) genotype constellations. A comparison of the amino acid residues presents in the antigenic epitopes of VP7 and VP4, showed differences in the electrostatic charges distribution, between wild type Brazilian strains and the Rotarix® and RotaTeq® vaccine strains. These findings reflect the structural analyses of the antigenic regions of VP7 and VP4 of the RVA G1P[8] in children with gastroenteritis in Northern Brazil raising the hypothesis that structural modifications at these sites over time may account for the emergence of new strains that could possibly pose a challenge to current vaccines. |
publishDate |
2019 |
dc.date.accessioned.fl_str_mv |
2019-02-26T12:12:40Z |
dc.date.available.fl_str_mv |
2019-02-26T12:12:40Z |
dc.date.issued.fl_str_mv |
2019 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
SANTOS, F. S. et al. G1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions. Infection, Genetics and Evolution, v. 69, p. 255-266, Apr. 2019.[Epub ahead of print] |
dc.identifier.uri.fl_str_mv |
https://patua.iec.gov.br/handle/iec/3613 |
dc.identifier.issn.-.fl_str_mv |
1567-1348 |
dc.identifier.doi.-.fl_str_mv |
10.1016/j.meegid.2019.02.009 |
identifier_str_mv |
SANTOS, F. S. et al. G1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions. Infection, Genetics and Evolution, v. 69, p. 255-266, Apr. 2019.[Epub ahead of print] 1567-1348 10.1016/j.meegid.2019.02.009 |
url |
https://patua.iec.gov.br/handle/iec/3613 |
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eng |
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eng |
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Elsevier |
publisher.none.fl_str_mv |
Elsevier |
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