G1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions

Detalhes bibliográficos
Autor(a) principal: Santos, F. S
Data de Publicação: 2019
Outros Autores: Sousa Júnior, Edivaldo Costa, Guerra, Sylvia de Fátima dos Santos, Lobo, P. S, Penha Junior, E. T, Lima, A. B. F, Vinente, C. B. G, Chagas, E. H. N, Justino, Maria Cleonice Aguiar, Linhares, Alexandre da Costa, Matthijnssens, J, Soares, Luana da Silva, Mascarenhas, Joana D'Arc Pereira
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Digital do Instituto Evandro Chagas (Patuá)
Texto Completo: https://patua.iec.gov.br/handle/iec/3613
Resumo: Worldwide rotaviruses A (RVA) are responsible for approximately 215,000 deaths annually among children aged <5 years. RVA G1P[8] remains associated with >50% of gastroenteritis cases in this age group. The aim of this study was to assess the genetic variability of G1P[8] strains detected in children with severe diarrhea in Belém, Pará, Brazil, during the post-rotavirus vaccine introduction era. Phylogenetic analysis clustered the VP4 and VP7 genes of 40 samples selected between 2009 and 2011 into lineages found to be different from the Rotarix® vaccine strain. A detailed investigation of their complete genotype constellations identified 2 reassortant viruses (5%), resulting from reassortments between the genogroups Wa-like and DS-1-like (G1-P[8]-I1-R2-C1-M1-A1-N1-T2-E1-H1) and Wa-like and AU-1-like (G1-P[8]-I1-R3-C1-M1-A1-N1-T1-E1-H1) genotype constellations. A comparison of the amino acid residues presents in the antigenic epitopes of VP7 and VP4, showed differences in the electrostatic charges distribution, between wild type Brazilian strains and the Rotarix® and RotaTeq® vaccine strains. These findings reflect the structural analyses of the antigenic regions of VP7 and VP4 of the RVA G1P[8] in children with gastroenteritis in Northern Brazil raising the hypothesis that structural modifications at these sites over time may account for the emergence of new strains that could possibly pose a challenge to current vaccines.
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spelling Santos, F. SSousa Júnior, Edivaldo CostaGuerra, Sylvia de Fátima dos SantosLobo, P. SPenha Junior, E. TLima, A. B. FVinente, C. B. GChagas, E. H. NJustino, Maria Cleonice AguiarLinhares, Alexandre da CostaMatthijnssens, JSoares, Luana da SilvaMascarenhas, Joana D'Arc Pereira2019-02-26T12:12:40Z2019-02-26T12:12:40Z2019SANTOS, F. S. et al. G1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions. Infection, Genetics and Evolution, v. 69, p. 255-266, Apr. 2019.[Epub ahead of print]1567-1348https://patua.iec.gov.br/handle/iec/361310.1016/j.meegid.2019.02.009Worldwide rotaviruses A (RVA) are responsible for approximately 215,000 deaths annually among children aged <5 years. RVA G1P[8] remains associated with >50% of gastroenteritis cases in this age group. The aim of this study was to assess the genetic variability of G1P[8] strains detected in children with severe diarrhea in Belém, Pará, Brazil, during the post-rotavirus vaccine introduction era. Phylogenetic analysis clustered the VP4 and VP7 genes of 40 samples selected between 2009 and 2011 into lineages found to be different from the Rotarix® vaccine strain. A detailed investigation of their complete genotype constellations identified 2 reassortant viruses (5%), resulting from reassortments between the genogroups Wa-like and DS-1-like (G1-P[8]-I1-R2-C1-M1-A1-N1-T2-E1-H1) and Wa-like and AU-1-like (G1-P[8]-I1-R3-C1-M1-A1-N1-T1-E1-H1) genotype constellations. A comparison of the amino acid residues presents in the antigenic epitopes of VP7 and VP4, showed differences in the electrostatic charges distribution, between wild type Brazilian strains and the Rotarix® and RotaTeq® vaccine strains. These findings reflect the structural analyses of the antigenic regions of VP7 and VP4 of the RVA G1P[8] in children with gastroenteritis in Northern Brazil raising the hypothesis that structural modifications at these sites over time may account for the emergence of new strains that could possibly pose a challenge to current vaccines.Universidade do Estado do Pará. Programa de Pós Graduação em Biologia Parasitária da Amazônia. Belém, PA, Brasil / Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Programa de Pós Graduação em Virologia. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Programa de Pós Graduação em Virologia. Ananindeua, PA, Brasil / Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Programa de Pós Graduação em Virologia. Ananindeua, PA, Brasil / Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Programa Institucional de Bolsas de Iniciação Científica. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Programa de Pós Graduação em Virologia. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Programa de Pós Graduação em Virologia. Ananindeua, PA, BrasilMinistério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, BrasilMinistério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, BrasilUniversity of Leuven. Rega Institute for Medical Research. Department of Microbiology and Immunology. aboratory of Clinical and Epidemiological Virology. Leuven, Belgium.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.engElsevierG1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regionsinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleRotavirus / patogenicidadeVacinas contra Rotavirus / administração & dosagemGastroenteriteRotavirus / genéticaGenótipoRearranjo Gênicoinfo:eu-repo/semantics/embargoedAccessreponame:Repositório Digital do Instituto Evandro Chagas (Patuá)instname:Instituto Evandro Chagas (IEC)instacron:IECORIGINALG1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions.pdfG1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions.pdfapplication/pdf551083https://patua.iec.gov.br/bitstreams/7bb60484-1987-4666-b219-0791553ece6c/downloadc9a9c128e29cac82a5d7fdf3f4e6da73MD51LICENSElicense.txtlicense.txttext/plain; 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dc.title.pt_BR.fl_str_mv G1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions
title G1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions
spellingShingle G1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions
Santos, F. S
Rotavirus / patogenicidade
Vacinas contra Rotavirus / administração & dosagem
Gastroenterite
Rotavirus / genética
Genótipo
Rearranjo Gênico
title_short G1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions
title_full G1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions
title_fullStr G1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions
title_full_unstemmed G1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions
title_sort G1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions
author Santos, F. S
author_facet Santos, F. S
Sousa Júnior, Edivaldo Costa
Guerra, Sylvia de Fátima dos Santos
Lobo, P. S
Penha Junior, E. T
Lima, A. B. F
Vinente, C. B. G
Chagas, E. H. N
Justino, Maria Cleonice Aguiar
Linhares, Alexandre da Costa
Matthijnssens, J
Soares, Luana da Silva
Mascarenhas, Joana D'Arc Pereira
author_role author
author2 Sousa Júnior, Edivaldo Costa
Guerra, Sylvia de Fátima dos Santos
Lobo, P. S
Penha Junior, E. T
Lima, A. B. F
Vinente, C. B. G
Chagas, E. H. N
Justino, Maria Cleonice Aguiar
Linhares, Alexandre da Costa
Matthijnssens, J
Soares, Luana da Silva
Mascarenhas, Joana D'Arc Pereira
author2_role author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Santos, F. S
Sousa Júnior, Edivaldo Costa
Guerra, Sylvia de Fátima dos Santos
Lobo, P. S
Penha Junior, E. T
Lima, A. B. F
Vinente, C. B. G
Chagas, E. H. N
Justino, Maria Cleonice Aguiar
Linhares, Alexandre da Costa
Matthijnssens, J
Soares, Luana da Silva
Mascarenhas, Joana D'Arc Pereira
dc.subject.decsPrimary.pt_BR.fl_str_mv Rotavirus / patogenicidade
Vacinas contra Rotavirus / administração & dosagem
Gastroenterite
Rotavirus / genética
Genótipo
Rearranjo Gênico
topic Rotavirus / patogenicidade
Vacinas contra Rotavirus / administração & dosagem
Gastroenterite
Rotavirus / genética
Genótipo
Rearranjo Gênico
description Worldwide rotaviruses A (RVA) are responsible for approximately 215,000 deaths annually among children aged <5 years. RVA G1P[8] remains associated with >50% of gastroenteritis cases in this age group. The aim of this study was to assess the genetic variability of G1P[8] strains detected in children with severe diarrhea in Belém, Pará, Brazil, during the post-rotavirus vaccine introduction era. Phylogenetic analysis clustered the VP4 and VP7 genes of 40 samples selected between 2009 and 2011 into lineages found to be different from the Rotarix® vaccine strain. A detailed investigation of their complete genotype constellations identified 2 reassortant viruses (5%), resulting from reassortments between the genogroups Wa-like and DS-1-like (G1-P[8]-I1-R2-C1-M1-A1-N1-T2-E1-H1) and Wa-like and AU-1-like (G1-P[8]-I1-R3-C1-M1-A1-N1-T1-E1-H1) genotype constellations. A comparison of the amino acid residues presents in the antigenic epitopes of VP7 and VP4, showed differences in the electrostatic charges distribution, between wild type Brazilian strains and the Rotarix® and RotaTeq® vaccine strains. These findings reflect the structural analyses of the antigenic regions of VP7 and VP4 of the RVA G1P[8] in children with gastroenteritis in Northern Brazil raising the hypothesis that structural modifications at these sites over time may account for the emergence of new strains that could possibly pose a challenge to current vaccines.
publishDate 2019
dc.date.accessioned.fl_str_mv 2019-02-26T12:12:40Z
dc.date.available.fl_str_mv 2019-02-26T12:12:40Z
dc.date.issued.fl_str_mv 2019
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.citation.fl_str_mv SANTOS, F. S. et al. G1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions. Infection, Genetics and Evolution, v. 69, p. 255-266, Apr. 2019.[Epub ahead of print]
dc.identifier.uri.fl_str_mv https://patua.iec.gov.br/handle/iec/3613
dc.identifier.issn.-.fl_str_mv 1567-1348
dc.identifier.doi.-.fl_str_mv 10.1016/j.meegid.2019.02.009
identifier_str_mv SANTOS, F. S. et al. G1P 8 Rotavirus in children with severe diarrhea in the post-vaccine introduction era in Brazil: evidence of reassortments and structural modifications of the antigenic VP7 and VP4 regions. Infection, Genetics and Evolution, v. 69, p. 255-266, Apr. 2019.[Epub ahead of print]
1567-1348
10.1016/j.meegid.2019.02.009
url https://patua.iec.gov.br/handle/iec/3613
dc.language.iso.fl_str_mv eng
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dc.rights.driver.fl_str_mv info:eu-repo/semantics/embargoedAccess
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dc.publisher.none.fl_str_mv Elsevier
publisher.none.fl_str_mv Elsevier
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institution IEC
reponame_str Repositório Digital do Instituto Evandro Chagas (Patuá)
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