Molecular epidemiology of human bocavirus in children with acute gastroenteritis from North Region of Brazil
Autor(a) principal: | |
---|---|
Data de Publicação: | 2019 |
Outros Autores: | , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Digital do Instituto Evandro Chagas (Patuá) |
Texto Completo: | https://patua.iec.gov.br/handle/iec/3852 |
Resumo: | PURPOSE: Human bocavirus (HBoV) is a DNA virus that is mostly associated with respiratory infections. However, because it has been found in stool samples, it has been suggested that it may be a causative agent for human enteric conditions. This underpins the continuous search for HBoVs, especially after the introduction of the rotavirus vaccine due to acute gastroenteritis cases related to emergent viruses, as HBoVs are more likely to be found in this post-vaccine scenario. Therefore, the aim of this study is to demonstrate the prevalence of HBoV in children aged less than 10 years with acute gastroenteritis in Brazil from November 2011 to November 2012. METHODOLOGY: Stool samples from hospitalized children ≤10 years old who presented symptoms of acute gastroenteritis were analysed for the presence of rotavirus A (RVA) by an enzyme-linked immunosorbent assay (ELISA), and for HBoV DNA by nested PCR. RESULTS: HBoV positivity was detected in 24.0 % (54/225) of samples. Two peaks of HBoV detection were observed in November 2011 and from July to September 2012. Co-infections between HBoV and rotavirus A were identified in 50.0 % (27/54) of specimens. Phylogenetic analysis identified the presence of HBoV-1 (94.8 %), HBoV-2 (2.6 %) and HBoV-3 (2.6 %) species, with only minor variations among them. CONCLUSION: Our findings provide evidence for the circulation of most HBoV genotypes (except HBoV-4) in the North Region of Brazil at a considerable rate and further investigations are necessary to improve our knowledge in the context of HBoV infections and their role in gastrointestinal diseases. |
id |
IEC-2_4de2fea81b8ba5bc0a77feb3e4bf5c40 |
---|---|
oai_identifier_str |
oai:patua.iec.gov.br:iec/3852 |
network_acronym_str |
IEC-2 |
network_name_str |
Repositório Digital do Instituto Evandro Chagas (Patuá) |
repository_id_str |
|
spelling |
Soares, Luana da SilvaLima, Ana Beatriz FPantoja, Kamilla CLobo, Patrícia dos SantosCruz, Jonas FGuerra, Sylvia de Fátima dos SantosBezerra, Delana Andreza MeloBandeira, Renato SMascarenhas, Joana D'Arc Pereira2019-08-21T17:57:01Z2019-08-21T17:57:01Z2019SOARES, Luana da Silva et al. Molecular epidemiology of human bocavirus in children with acute gastroenteritis from North Region of Brazil. Journal of Medical Microbiology, v. 68, n. 8, p. 1233-1239, Aug. 2019. DOI: https://doi.org/ 10.1099/jmm.0.001026. Disponível em: https://www.microbiologyresearch.org/docserver/fulltext/jmm/68/8/1233_jmm001026.pdfexpires=1671043406&id=id&accname=guest&checksum=67347576F825EFD6D50AC0E1649A02A5.0022-2615https://patua.iec.gov.br/handle/iec/385210.1099/jmm.0.001026PURPOSE: Human bocavirus (HBoV) is a DNA virus that is mostly associated with respiratory infections. However, because it has been found in stool samples, it has been suggested that it may be a causative agent for human enteric conditions. This underpins the continuous search for HBoVs, especially after the introduction of the rotavirus vaccine due to acute gastroenteritis cases related to emergent viruses, as HBoVs are more likely to be found in this post-vaccine scenario. Therefore, the aim of this study is to demonstrate the prevalence of HBoV in children aged less than 10 years with acute gastroenteritis in Brazil from November 2011 to November 2012. METHODOLOGY: Stool samples from hospitalized children ≤10 years old who presented symptoms of acute gastroenteritis were analysed for the presence of rotavirus A (RVA) by an enzyme-linked immunosorbent assay (ELISA), and for HBoV DNA by nested PCR. RESULTS: HBoV positivity was detected in 24.0 % (54/225) of samples. Two peaks of HBoV detection were observed in November 2011 and from July to September 2012. Co-infections between HBoV and rotavirus A were identified in 50.0 % (27/54) of specimens. Phylogenetic analysis identified the presence of HBoV-1 (94.8 %), HBoV-2 (2.6 %) and HBoV-3 (2.6 %) species, with only minor variations among them. CONCLUSION: Our findings provide evidence for the circulation of most HBoV genotypes (except HBoV-4) in the North Region of Brazil at a considerable rate and further investigations are necessary to improve our knowledge in the context of HBoV infections and their role in gastrointestinal diseases.National Council for Scientific and Technological Development (CNPq)Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.engMicrobiology SocietyMolecular epidemiology of human bocavirus in children with acute gastroenteritis from North Region of Brazilinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleBocavirus Humano / patogenicidadeGastroenterite / virologiaFezes / virologiaEnsaio de Imunoadsorção Enzimática / métodosReação em Cadeia da Polimerase / métodosPrevalênciainfo:eu-repo/semantics/openAccessreponame:Repositório Digital do Instituto Evandro Chagas (Patuá)instname:Instituto Evandro Chagas (IEC)instacron:IECLICENSElicense.txtlicense.txttext/plain; charset=utf-82182https://patua.iec.gov.br/bitstreams/ec72c207-abeb-4ea7-9113-837535dbe326/download11832eea31b16df8613079d742d61793MD52TEXTMolecular epidemiology of human bocavirus in children with acute gastroenteritis from North Region of Brazil.pdf.txtMolecular epidemiology of human bocavirus in children with acute gastroenteritis from North Region of Brazil.pdf.txtExtracted texttext/plain25837https://patua.iec.gov.br/bitstreams/92191df3-208a-41c6-8113-2128d9507037/download418abda106c2875ac5a22c6bab097b15MD56THUMBNAILMolecular epidemiology of human bocavirus in children with acute gastroenteritis from North Region of Brazil.pdf.jpgMolecular epidemiology of human bocavirus in children with acute gastroenteritis from North Region of Brazil.pdf.jpgGenerated Thumbnailimage/jpeg5919https://patua.iec.gov.br/bitstreams/25b824e3-84e9-446f-aa9c-28c3dd12a79f/downloadbbc01af27768a3510c30486397dea8b3MD57ORIGINALMolecular epidemiology of human bocavirus in children with acute gastroenteritis from North Region of Brazil.pdfMolecular epidemiology of human bocavirus in children with acute gastroenteritis from North Region of Brazil.pdfapplication/pdf1723125https://patua.iec.gov.br/bitstreams/0874fd3d-f505-4a7b-9840-84d3d0cf84cd/download1461105ad5c6b52b8e6d1fa335918aa7MD55iec/38522022-12-14 18:29:40.447oai:patua.iec.gov.br:iec/3852https://patua.iec.gov.brRepositório InstitucionalPUBhttps://patua.iec.gov.br/oai/requestclariceneta@iec.gov.br || Biblioteca@iec.gov.bropendoar:2022-12-14T18:29:40Repositório Digital do Instituto Evandro Chagas (Patuá) - Instituto Evandro Chagas (IEC)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 |
dc.title.pt_BR.fl_str_mv |
Molecular epidemiology of human bocavirus in children with acute gastroenteritis from North Region of Brazil |
title |
Molecular epidemiology of human bocavirus in children with acute gastroenteritis from North Region of Brazil |
spellingShingle |
Molecular epidemiology of human bocavirus in children with acute gastroenteritis from North Region of Brazil Soares, Luana da Silva Bocavirus Humano / patogenicidade Gastroenterite / virologia Fezes / virologia Ensaio de Imunoadsorção Enzimática / métodos Reação em Cadeia da Polimerase / métodos Prevalência |
title_short |
Molecular epidemiology of human bocavirus in children with acute gastroenteritis from North Region of Brazil |
title_full |
Molecular epidemiology of human bocavirus in children with acute gastroenteritis from North Region of Brazil |
title_fullStr |
Molecular epidemiology of human bocavirus in children with acute gastroenteritis from North Region of Brazil |
title_full_unstemmed |
Molecular epidemiology of human bocavirus in children with acute gastroenteritis from North Region of Brazil |
title_sort |
Molecular epidemiology of human bocavirus in children with acute gastroenteritis from North Region of Brazil |
author |
Soares, Luana da Silva |
author_facet |
Soares, Luana da Silva Lima, Ana Beatriz F Pantoja, Kamilla C Lobo, Patrícia dos Santos Cruz, Jonas F Guerra, Sylvia de Fátima dos Santos Bezerra, Delana Andreza Melo Bandeira, Renato S Mascarenhas, Joana D'Arc Pereira |
author_role |
author |
author2 |
Lima, Ana Beatriz F Pantoja, Kamilla C Lobo, Patrícia dos Santos Cruz, Jonas F Guerra, Sylvia de Fátima dos Santos Bezerra, Delana Andreza Melo Bandeira, Renato S Mascarenhas, Joana D'Arc Pereira |
author2_role |
author author author author author author author author |
dc.contributor.author.fl_str_mv |
Soares, Luana da Silva Lima, Ana Beatriz F Pantoja, Kamilla C Lobo, Patrícia dos Santos Cruz, Jonas F Guerra, Sylvia de Fátima dos Santos Bezerra, Delana Andreza Melo Bandeira, Renato S Mascarenhas, Joana D'Arc Pereira |
dc.subject.decsPrimary.pt_BR.fl_str_mv |
Bocavirus Humano / patogenicidade Gastroenterite / virologia Fezes / virologia Ensaio de Imunoadsorção Enzimática / métodos Reação em Cadeia da Polimerase / métodos Prevalência |
topic |
Bocavirus Humano / patogenicidade Gastroenterite / virologia Fezes / virologia Ensaio de Imunoadsorção Enzimática / métodos Reação em Cadeia da Polimerase / métodos Prevalência |
description |
PURPOSE: Human bocavirus (HBoV) is a DNA virus that is mostly associated with respiratory infections. However, because it has been found in stool samples, it has been suggested that it may be a causative agent for human enteric conditions. This underpins the continuous search for HBoVs, especially after the introduction of the rotavirus vaccine due to acute gastroenteritis cases related to emergent viruses, as HBoVs are more likely to be found in this post-vaccine scenario. Therefore, the aim of this study is to demonstrate the prevalence of HBoV in children aged less than 10 years with acute gastroenteritis in Brazil from November 2011 to November 2012. METHODOLOGY: Stool samples from hospitalized children ≤10 years old who presented symptoms of acute gastroenteritis were analysed for the presence of rotavirus A (RVA) by an enzyme-linked immunosorbent assay (ELISA), and for HBoV DNA by nested PCR. RESULTS: HBoV positivity was detected in 24.0 % (54/225) of samples. Two peaks of HBoV detection were observed in November 2011 and from July to September 2012. Co-infections between HBoV and rotavirus A were identified in 50.0 % (27/54) of specimens. Phylogenetic analysis identified the presence of HBoV-1 (94.8 %), HBoV-2 (2.6 %) and HBoV-3 (2.6 %) species, with only minor variations among them. CONCLUSION: Our findings provide evidence for the circulation of most HBoV genotypes (except HBoV-4) in the North Region of Brazil at a considerable rate and further investigations are necessary to improve our knowledge in the context of HBoV infections and their role in gastrointestinal diseases. |
publishDate |
2019 |
dc.date.accessioned.fl_str_mv |
2019-08-21T17:57:01Z |
dc.date.available.fl_str_mv |
2019-08-21T17:57:01Z |
dc.date.issued.fl_str_mv |
2019 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
SOARES, Luana da Silva et al. Molecular epidemiology of human bocavirus in children with acute gastroenteritis from North Region of Brazil. Journal of Medical Microbiology, v. 68, n. 8, p. 1233-1239, Aug. 2019. DOI: https://doi.org/ 10.1099/jmm.0.001026. Disponível em: https://www.microbiologyresearch.org/docserver/fulltext/jmm/68/8/1233_jmm001026.pdfexpires=1671043406&id=id&accname=guest&checksum=67347576F825EFD6D50AC0E1649A02A5. |
dc.identifier.uri.fl_str_mv |
https://patua.iec.gov.br/handle/iec/3852 |
dc.identifier.issn.-.fl_str_mv |
0022-2615 |
dc.identifier.doi.-.fl_str_mv |
10.1099/jmm.0.001026 |
identifier_str_mv |
SOARES, Luana da Silva et al. Molecular epidemiology of human bocavirus in children with acute gastroenteritis from North Region of Brazil. Journal of Medical Microbiology, v. 68, n. 8, p. 1233-1239, Aug. 2019. DOI: https://doi.org/ 10.1099/jmm.0.001026. Disponível em: https://www.microbiologyresearch.org/docserver/fulltext/jmm/68/8/1233_jmm001026.pdfexpires=1671043406&id=id&accname=guest&checksum=67347576F825EFD6D50AC0E1649A02A5. 0022-2615 10.1099/jmm.0.001026 |
url |
https://patua.iec.gov.br/handle/iec/3852 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.publisher.none.fl_str_mv |
Microbiology Society |
publisher.none.fl_str_mv |
Microbiology Society |
dc.source.none.fl_str_mv |
reponame:Repositório Digital do Instituto Evandro Chagas (Patuá) instname:Instituto Evandro Chagas (IEC) instacron:IEC |
instname_str |
Instituto Evandro Chagas (IEC) |
instacron_str |
IEC |
institution |
IEC |
reponame_str |
Repositório Digital do Instituto Evandro Chagas (Patuá) |
collection |
Repositório Digital do Instituto Evandro Chagas (Patuá) |
bitstream.url.fl_str_mv |
https://patua.iec.gov.br/bitstreams/ec72c207-abeb-4ea7-9113-837535dbe326/download https://patua.iec.gov.br/bitstreams/92191df3-208a-41c6-8113-2128d9507037/download https://patua.iec.gov.br/bitstreams/25b824e3-84e9-446f-aa9c-28c3dd12a79f/download https://patua.iec.gov.br/bitstreams/0874fd3d-f505-4a7b-9840-84d3d0cf84cd/download |
bitstream.checksum.fl_str_mv |
11832eea31b16df8613079d742d61793 418abda106c2875ac5a22c6bab097b15 bbc01af27768a3510c30486397dea8b3 1461105ad5c6b52b8e6d1fa335918aa7 |
bitstream.checksumAlgorithm.fl_str_mv |
MD5 MD5 MD5 MD5 |
repository.name.fl_str_mv |
Repositório Digital do Instituto Evandro Chagas (Patuá) - Instituto Evandro Chagas (IEC) |
repository.mail.fl_str_mv |
clariceneta@iec.gov.br || Biblioteca@iec.gov.br |
_version_ |
1809190055517880320 |