Comparative analyses of three swallow species (Aves, passeriformes, hirundinidae): insights on karyotype evolution and genomic organization

Detalhes bibliográficos
Autor(a) principal: Barcellos, Suziane Alves
Data de Publicação: 2020
Outros Autores: Kretschmer, Rafael, Souza, Marcelo Santos de, Costa, Alice Lemos, Degrandi, Tiago Marafiga, Lopes, Cassiane Furlan, Ferguson-Smith, Malcolm A, Pereira, Jorge, Oliveira, Edivaldo Herculano Corrêa de, Gunski, Ricardo José, Garnero, Analía del Valle
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Digital do Instituto Evandro Chagas (Patuá)
Texto Completo: https://patua.iec.gov.br/handle/iec/4076
Resumo: Despite the richness of species in the Hirudinidae family, little is known about the genome organization of swallows. The Progne tapera species presents genetic and morphological difference when compared to other members of the same genus. Hence, the aims of this study were to analyze the chromosomal evolution of three species Progne tapera, Progne chalybea and Pygochelidon cyanoleuca - by comparative chromosome painting using two sets of probes, Gallus gallus and Zenaida auriculata, in order to determine chromosome homologies and the relationship between these species. All karyotypes exhibited 76 chromosomes with similar morphology, except for the 5th, 6th and 7th chromosome pairs in P. cyanoleuca. Additionally, comparative chromosome painting demonstrated the same hybridization pattern in the two Progne, which was similar to the putative avian ancestral karyotype, except for the centric fission in the first pair, as found in other Passeriformes. Thus, these data display a close relationship between the Progne species. Although P. cyanoleuca demonstrated the same fission in the first pair of the ancestral syntenic (GGA1), it also showed an additional chromosomal rearrangement for this species, namely a fusion with a microchromosome in the seventh pair
id IEC-2_89af69fe5768c329af265f38e7f277c6
oai_identifier_str oai:patua.iec.gov.br:iec/4076
network_acronym_str IEC-2
network_name_str Repositório Digital do Instituto Evandro Chagas (Patuá)
repository_id_str
spelling Barcellos, Suziane AlvesKretschmer, RafaelSouza, Marcelo Santos deCosta, Alice LemosDegrandi, Tiago MarafigaLopes, Cassiane FurlanFerguson-Smith, Malcolm APereira, JorgeOliveira, Edivaldo Herculano Corrêa deGunski, Ricardo JoséGarnero, Analía del Valle2020-04-06T17:34:28Z2020-04-06T17:34:28Z2020BARCELLOS, Suziane Alves et al. Comparative analyses of three swallow species (Aves, passeriformes, hirundinidae): insights on karyotype evolution and genomic organization. Genetics and Molecular Biology, v. 43, n. 1, e20190232, 2020.1415-4757https://patua.iec.gov.br/handle/iec/407610.1590/1678-4685-gmb-2019-0232Despite the richness of species in the Hirudinidae family, little is known about the genome organization of swallows. The Progne tapera species presents genetic and morphological difference when compared to other members of the same genus. Hence, the aims of this study were to analyze the chromosomal evolution of three species Progne tapera, Progne chalybea and Pygochelidon cyanoleuca - by comparative chromosome painting using two sets of probes, Gallus gallus and Zenaida auriculata, in order to determine chromosome homologies and the relationship between these species. All karyotypes exhibited 76 chromosomes with similar morphology, except for the 5th, 6th and 7th chromosome pairs in P. cyanoleuca. Additionally, comparative chromosome painting demonstrated the same hybridization pattern in the two Progne, which was similar to the putative avian ancestral karyotype, except for the centric fission in the first pair, as found in other Passeriformes. Thus, these data display a close relationship between the Progne species. Although P. cyanoleuca demonstrated the same fission in the first pair of the ancestral syntenic (GGA1), it also showed an additional chromosomal rearrangement for this species, namely a fusion with a microchromosome in the seventh pairThis study was financed in part by the Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - Brasil (CAPES) - Finance Code 001Universidade Federal do Pampa. Programa de Pós-graduação em Ciências Biológicas. São Gabriel, RS, Brazil.Universidade Federal do Rio Grande do Sul. Programa de Pós-graduação em Genética e Biologia Molecular. Porto Alegre, RS, Brazil.Universidade Federal do Pampa. Programa de Pós-graduação em Ciências Biológicas. São Gabriel, RS, Brazil.Universidade Federal do Pampa. Programa de Pós-graduação em Ciências Biológicas. São Gabriel, RS, Brazil.Universidade Federal do Paraná. Programa de Pós-Graduação em Genética. Curitiba, PR, Brazil.Universidade Federal do Pampa. Programa de Pós-graduação em Ciências Biológicas. São Gabriel, RS, Brazil.University of Cambridge. Department of Veterinary Medicine. Cambridge Resource Centre for Comparative Genomics. Cambridge, United Kingdom.University of Cambridge. Department of Veterinary Medicine. Cambridge Resource Centre for Comparative Genomics. Cambridge, United Kingdom.Universidade Federal do Pará. Instituto de Ciências Exatas e Naturais. Belém, PA, Brazil / Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Universidade Federal do Pampa. Programa de Pós-graduação em Ciências Biológicas. São Gabriel, RS, Brazil.Universidade Federal do Pampa. Programa de Pós-graduação em Ciências Biológicas. São Gabriel, RS, Brazil.engSociedade Brasileira de GenéticaComparative analyses of three swallow species (Aves, passeriformes, hirundinidae): insights on karyotype evolution and genomic organizationinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleAves / genéticaAndorinhas / anatomia & histologiaColoração Cromossômica / veterináriaCariotipagemCitogenéticaColoração CromossômicaEvolução MolecularFilogeniaMapeamento Cromossômicoinfo:eu-repo/semantics/openAccessreponame:Repositório Digital do Instituto Evandro Chagas (Patuá)instname:Instituto Evandro Chagas (IEC)instacron:IECORIGINALComparative analyses of three swallow species (Aves, passeriformes, hirundinidae): insights on karyotype evolution and genomic organization.pdfComparative analyses of three swallow species (Aves, passeriformes, hirundinidae): insights on karyotype evolution and genomic organization.pdfapplication/pdf2256795https://patua.iec.gov.br/bitstreams/b67ab146-5a66-4b94-990d-ffa81904568b/download5c2f7e5aedb55dd33e0f546c84efde4cMD51LICENSElicense.txtlicense.txttext/plain; charset=utf-82182https://patua.iec.gov.br/bitstreams/d9ffd9f5-7183-4767-bfb8-288fddbae487/download11832eea31b16df8613079d742d61793MD52TEXTComparative analyses of three swallow species (Aves, passeriformes, hirundinidae): insights on karyotype evolution and genomic organization.pdf.txtComparative analyses of three swallow species (Aves, passeriformes, hirundinidae): insights on karyotype evolution and genomic organization.pdf.txtExtracted texttext/plain22361https://patua.iec.gov.br/bitstreams/f61c5d50-cbb3-4566-b5a0-57de37524877/download60b95ea8749a532ffe3cba8644d1d72bMD55THUMBNAILComparative analyses of three swallow species (Aves, passeriformes, hirundinidae): insights on karyotype evolution and genomic organization.pdf.jpgComparative analyses of three swallow species (Aves, passeriformes, hirundinidae): insights on karyotype evolution and genomic organization.pdf.jpgGenerated Thumbnailimage/jpeg5965https://patua.iec.gov.br/bitstreams/5ee0aa34-41d8-4a2d-a19a-91dbcfad907f/downloadc03465cd2a1c24f497332142ce678cbbMD56iec/40762022-10-20 22:42:38.808oai:patua.iec.gov.br:iec/4076https://patua.iec.gov.brRepositório InstitucionalPUBhttps://patua.iec.gov.br/oai/requestclariceneta@iec.gov.br || Biblioteca@iec.gov.bropendoar:2022-10-20T22:42:38Repositório Digital do Instituto Evandro Chagas (Patuá) - Instituto Evandro Chagas (IEC)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
dc.title.pt_BR.fl_str_mv Comparative analyses of three swallow species (Aves, passeriformes, hirundinidae): insights on karyotype evolution and genomic organization
title Comparative analyses of three swallow species (Aves, passeriformes, hirundinidae): insights on karyotype evolution and genomic organization
spellingShingle Comparative analyses of three swallow species (Aves, passeriformes, hirundinidae): insights on karyotype evolution and genomic organization
Barcellos, Suziane Alves
Aves / genética
Andorinhas / anatomia & histologia
Coloração Cromossômica / veterinária
Cariotipagem
Citogenética
Coloração Cromossômica
Evolução Molecular
Filogenia
Mapeamento Cromossômico
title_short Comparative analyses of three swallow species (Aves, passeriformes, hirundinidae): insights on karyotype evolution and genomic organization
title_full Comparative analyses of three swallow species (Aves, passeriformes, hirundinidae): insights on karyotype evolution and genomic organization
title_fullStr Comparative analyses of three swallow species (Aves, passeriformes, hirundinidae): insights on karyotype evolution and genomic organization
title_full_unstemmed Comparative analyses of three swallow species (Aves, passeriformes, hirundinidae): insights on karyotype evolution and genomic organization
title_sort Comparative analyses of three swallow species (Aves, passeriformes, hirundinidae): insights on karyotype evolution and genomic organization
author Barcellos, Suziane Alves
author_facet Barcellos, Suziane Alves
Kretschmer, Rafael
Souza, Marcelo Santos de
Costa, Alice Lemos
Degrandi, Tiago Marafiga
Lopes, Cassiane Furlan
Ferguson-Smith, Malcolm A
Pereira, Jorge
Oliveira, Edivaldo Herculano Corrêa de
Gunski, Ricardo José
Garnero, Analía del Valle
author_role author
author2 Kretschmer, Rafael
Souza, Marcelo Santos de
Costa, Alice Lemos
Degrandi, Tiago Marafiga
Lopes, Cassiane Furlan
Ferguson-Smith, Malcolm A
Pereira, Jorge
Oliveira, Edivaldo Herculano Corrêa de
Gunski, Ricardo José
Garnero, Analía del Valle
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Barcellos, Suziane Alves
Kretschmer, Rafael
Souza, Marcelo Santos de
Costa, Alice Lemos
Degrandi, Tiago Marafiga
Lopes, Cassiane Furlan
Ferguson-Smith, Malcolm A
Pereira, Jorge
Oliveira, Edivaldo Herculano Corrêa de
Gunski, Ricardo José
Garnero, Analía del Valle
dc.subject.decsPrimary.pt_BR.fl_str_mv Aves / genética
Andorinhas / anatomia & histologia
Coloração Cromossômica / veterinária
Cariotipagem
Citogenética
Coloração Cromossômica
Evolução Molecular
Filogenia
Mapeamento Cromossômico
topic Aves / genética
Andorinhas / anatomia & histologia
Coloração Cromossômica / veterinária
Cariotipagem
Citogenética
Coloração Cromossômica
Evolução Molecular
Filogenia
Mapeamento Cromossômico
description Despite the richness of species in the Hirudinidae family, little is known about the genome organization of swallows. The Progne tapera species presents genetic and morphological difference when compared to other members of the same genus. Hence, the aims of this study were to analyze the chromosomal evolution of three species Progne tapera, Progne chalybea and Pygochelidon cyanoleuca - by comparative chromosome painting using two sets of probes, Gallus gallus and Zenaida auriculata, in order to determine chromosome homologies and the relationship between these species. All karyotypes exhibited 76 chromosomes with similar morphology, except for the 5th, 6th and 7th chromosome pairs in P. cyanoleuca. Additionally, comparative chromosome painting demonstrated the same hybridization pattern in the two Progne, which was similar to the putative avian ancestral karyotype, except for the centric fission in the first pair, as found in other Passeriformes. Thus, these data display a close relationship between the Progne species. Although P. cyanoleuca demonstrated the same fission in the first pair of the ancestral syntenic (GGA1), it also showed an additional chromosomal rearrangement for this species, namely a fusion with a microchromosome in the seventh pair
publishDate 2020
dc.date.accessioned.fl_str_mv 2020-04-06T17:34:28Z
dc.date.available.fl_str_mv 2020-04-06T17:34:28Z
dc.date.issued.fl_str_mv 2020
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.citation.fl_str_mv BARCELLOS, Suziane Alves et al. Comparative analyses of three swallow species (Aves, passeriformes, hirundinidae): insights on karyotype evolution and genomic organization. Genetics and Molecular Biology, v. 43, n. 1, e20190232, 2020.
dc.identifier.uri.fl_str_mv https://patua.iec.gov.br/handle/iec/4076
dc.identifier.issn.-.fl_str_mv 1415-4757
dc.identifier.doi.-.fl_str_mv 10.1590/1678-4685-gmb-2019-0232
identifier_str_mv BARCELLOS, Suziane Alves et al. Comparative analyses of three swallow species (Aves, passeriformes, hirundinidae): insights on karyotype evolution and genomic organization. Genetics and Molecular Biology, v. 43, n. 1, e20190232, 2020.
1415-4757
10.1590/1678-4685-gmb-2019-0232
url https://patua.iec.gov.br/handle/iec/4076
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv reponame:Repositório Digital do Instituto Evandro Chagas (Patuá)
instname:Instituto Evandro Chagas (IEC)
instacron:IEC
instname_str Instituto Evandro Chagas (IEC)
instacron_str IEC
institution IEC
reponame_str Repositório Digital do Instituto Evandro Chagas (Patuá)
collection Repositório Digital do Instituto Evandro Chagas (Patuá)
bitstream.url.fl_str_mv https://patua.iec.gov.br/bitstreams/b67ab146-5a66-4b94-990d-ffa81904568b/download
https://patua.iec.gov.br/bitstreams/d9ffd9f5-7183-4767-bfb8-288fddbae487/download
https://patua.iec.gov.br/bitstreams/f61c5d50-cbb3-4566-b5a0-57de37524877/download
https://patua.iec.gov.br/bitstreams/5ee0aa34-41d8-4a2d-a19a-91dbcfad907f/download
bitstream.checksum.fl_str_mv 5c2f7e5aedb55dd33e0f546c84efde4c
11832eea31b16df8613079d742d61793
60b95ea8749a532ffe3cba8644d1d72b
c03465cd2a1c24f497332142ce678cbb
bitstream.checksumAlgorithm.fl_str_mv MD5
MD5
MD5
MD5
repository.name.fl_str_mv Repositório Digital do Instituto Evandro Chagas (Patuá) - Instituto Evandro Chagas (IEC)
repository.mail.fl_str_mv clariceneta@iec.gov.br || Biblioteca@iec.gov.br
_version_ 1809190049311358976

Registros relacionados