Comprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas
Autor(a) principal: | |
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Data de Publicação: | 2022 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Digital do Instituto Evandro Chagas (Patuá) |
Texto Completo: | https://patua.iec.gov.br/handle/iec/4511 |
Resumo: | Gliomas are the most commonly occurring malignant brain tumor characterized by an immunosuppressive microenvironment accompanied by profound epigenetic changes, thus influencing the prognosis. Glutathione peroxidase 7 (GPX7) is essential for regulating reactive oxygen species homeostasis under oxidative stress. However, little is known about the function of GPX7 in gliomas. In this study, we hypothesized that GPX7 methylation status could influence biological functions and local immune responses that ultimately impact prognosis in adult gliomas. We conducted an integrated bioinformatics analysis mining GPX7 DNA methylation status, transcriptional and survival data of glioma patients. We discovered that GPX7 was remarkably increased in glioma tissues and cell lines, and was associated with poor prognosis. This upregulation was significantly linked to clinicopathological and molecular features, besides being expressed in a cell cycle-dependent manner. Our results consistently demonstrated that upregulation of GPX7 is tightly modulated by epigenetic processes, which also impacted the overall survival of patients with low-grade gliomas (LGG). Based on the analysis of biological functions, we found that GPX7 might be involved in immune mechanisms involving both innate and adaptive immunity, type I interferon production and regulation of synaptic transmission in LGG, whereas in GBM, it is mainly related to metabolic regulation of mitochondrial dynamics. We also found that GPX7 strongly correlates with immune cell infiltration and diverse immune cell markers, suggesting its role in tumor-specific immune response and in regulating the migration of immune cell types to the tumor microenvironment. Combining these multiple data, we provided the first evidence regarding the epigenetic-mediated regulatory mechanisms underlying GPX7 activation in gliomas. Furthermore, our study brings key insights into the significant effect of GPX7 in modulating both immune molecules and in immune cell infiltration in the microenvironment of gliomas, which might impact the patient outcome, opening up future opportunities to regulate the local immune response. |
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Ferreira, Wallax Augusto SilvaVitiello, Glauco Akelinghton FreireMedina, Tiago da SilvaOliveira, Edivaldo Herculano Corrêa de2022-05-17T19:01:39Z2022-05-17T19:01:39Z2022FERREIRA, Wallax Augusto Silva et al. Comprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas. Scientific Reports, v. 12, n. 1, p. 1-24, Apr. 2022.2045-2322https://patua.iec.gov.br/handle/iec/451110.1038/s41598-022-10114-1Gliomas are the most commonly occurring malignant brain tumor characterized by an immunosuppressive microenvironment accompanied by profound epigenetic changes, thus influencing the prognosis. Glutathione peroxidase 7 (GPX7) is essential for regulating reactive oxygen species homeostasis under oxidative stress. However, little is known about the function of GPX7 in gliomas. In this study, we hypothesized that GPX7 methylation status could influence biological functions and local immune responses that ultimately impact prognosis in adult gliomas. We conducted an integrated bioinformatics analysis mining GPX7 DNA methylation status, transcriptional and survival data of glioma patients. We discovered that GPX7 was remarkably increased in glioma tissues and cell lines, and was associated with poor prognosis. This upregulation was significantly linked to clinicopathological and molecular features, besides being expressed in a cell cycle-dependent manner. Our results consistently demonstrated that upregulation of GPX7 is tightly modulated by epigenetic processes, which also impacted the overall survival of patients with low-grade gliomas (LGG). Based on the analysis of biological functions, we found that GPX7 might be involved in immune mechanisms involving both innate and adaptive immunity, type I interferon production and regulation of synaptic transmission in LGG, whereas in GBM, it is mainly related to metabolic regulation of mitochondrial dynamics. We also found that GPX7 strongly correlates with immune cell infiltration and diverse immune cell markers, suggesting its role in tumor-specific immune response and in regulating the migration of immune cell types to the tumor microenvironment. Combining these multiple data, we provided the first evidence regarding the epigenetic-mediated regulatory mechanisms underlying GPX7 activation in gliomas. Furthermore, our study brings key insights into the significant effect of GPX7 in modulating both immune molecules and in immune cell infiltration in the microenvironment of gliomas, which might impact the patient outcome, opening up future opportunities to regulate the local immune response.Instituto Evandro Chagas (Brazil) and Pro-Reitoria de Pesquisa e Pos-GraduacAo (PROPESP/UFPA, Brazil)Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Laboratório de Citogenômica e Mutagênese Ambiental. Ananindeua, PA, BrasilA.C. Camargo Cancer Center. International Research Center. Translational Immuno‑Oncology Group. São Paulo, SP, BrazilA.C. Camargo Cancer Center. International Research Center. Translational Immuno‑Oncology Group. São Paulo, SP, Brazil / National Institute of Science and Technology in Oncogenomics and Therapeutic Innovation. São Paulo, SP, Brazil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Laboratório de Citogenômica e Mutagênese Ambiental. Ananindeua, PA, Brasil / Federal University of Pará. Faculty of Natural Sciences. Institute of Exact and Natural Sciences. Belém, PA, BrazilengNature ResearchComprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomasinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGlioma / imunologiaGlutationa Peroxidase / análiseFatores ImunológicosEstresse Oxidativoinfo:eu-repo/semantics/openAccessreponame:Repositório Digital do Instituto Evandro Chagas (Patuá)instname:Instituto Evandro Chagas (IEC)instacron:IECORIGINALComprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas.pdfComprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas.pdfapplication/pdf91367276https://patua.iec.gov.br/bitstreams/71ff4165-a879-4a06-8fd3-dbf5f3d15775/download56315bd818d6575d43c2e9a29ae46510MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-82182https://patua.iec.gov.br/bitstreams/363846b1-a91e-48fb-9ffa-6cb8fffbdd7b/download11832eea31b16df8613079d742d61793MD52TEXTComprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas.pdf.txtComprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas.pdf.txtExtracted texttext/plain105474https://patua.iec.gov.br/bitstreams/595579a9-b3dc-4708-ad1d-533a5f8c3b28/download5476c28ceabd703f3065e9b69b6100ddMD55THUMBNAILComprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas.pdf.jpgComprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas.pdf.jpgGenerated Thumbnailimage/jpeg5967https://patua.iec.gov.br/bitstreams/2b828995-fe09-4096-be84-49c317bddb69/downloadb1ff4ba969ef15f8ed4477b49177600cMD56iec/45112022-10-20 21:11:22.563oai:patua.iec.gov.br:iec/4511https://patua.iec.gov.brRepositório InstitucionalPUBhttps://patua.iec.gov.br/oai/requestclariceneta@iec.gov.br || Biblioteca@iec.gov.bropendoar:2022-10-20T21:11:22Repositório Digital do Instituto Evandro Chagas (Patuá) - 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dc.title.pt_BR.fl_str_mv |
Comprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas |
title |
Comprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas |
spellingShingle |
Comprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas Ferreira, Wallax Augusto Silva Glioma / imunologia Glutationa Peroxidase / análise Fatores Imunológicos Estresse Oxidativo |
title_short |
Comprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas |
title_full |
Comprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas |
title_fullStr |
Comprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas |
title_full_unstemmed |
Comprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas |
title_sort |
Comprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas |
author |
Ferreira, Wallax Augusto Silva |
author_facet |
Ferreira, Wallax Augusto Silva Vitiello, Glauco Akelinghton Freire Medina, Tiago da Silva Oliveira, Edivaldo Herculano Corrêa de |
author_role |
author |
author2 |
Vitiello, Glauco Akelinghton Freire Medina, Tiago da Silva Oliveira, Edivaldo Herculano Corrêa de |
author2_role |
author author author |
dc.contributor.author.fl_str_mv |
Ferreira, Wallax Augusto Silva Vitiello, Glauco Akelinghton Freire Medina, Tiago da Silva Oliveira, Edivaldo Herculano Corrêa de |
dc.subject.decsPrimary.pt_BR.fl_str_mv |
Glioma / imunologia Glutationa Peroxidase / análise Fatores Imunológicos Estresse Oxidativo |
topic |
Glioma / imunologia Glutationa Peroxidase / análise Fatores Imunológicos Estresse Oxidativo |
description |
Gliomas are the most commonly occurring malignant brain tumor characterized by an immunosuppressive microenvironment accompanied by profound epigenetic changes, thus influencing the prognosis. Glutathione peroxidase 7 (GPX7) is essential for regulating reactive oxygen species homeostasis under oxidative stress. However, little is known about the function of GPX7 in gliomas. In this study, we hypothesized that GPX7 methylation status could influence biological functions and local immune responses that ultimately impact prognosis in adult gliomas. We conducted an integrated bioinformatics analysis mining GPX7 DNA methylation status, transcriptional and survival data of glioma patients. We discovered that GPX7 was remarkably increased in glioma tissues and cell lines, and was associated with poor prognosis. This upregulation was significantly linked to clinicopathological and molecular features, besides being expressed in a cell cycle-dependent manner. Our results consistently demonstrated that upregulation of GPX7 is tightly modulated by epigenetic processes, which also impacted the overall survival of patients with low-grade gliomas (LGG). Based on the analysis of biological functions, we found that GPX7 might be involved in immune mechanisms involving both innate and adaptive immunity, type I interferon production and regulation of synaptic transmission in LGG, whereas in GBM, it is mainly related to metabolic regulation of mitochondrial dynamics. We also found that GPX7 strongly correlates with immune cell infiltration and diverse immune cell markers, suggesting its role in tumor-specific immune response and in regulating the migration of immune cell types to the tumor microenvironment. Combining these multiple data, we provided the first evidence regarding the epigenetic-mediated regulatory mechanisms underlying GPX7 activation in gliomas. Furthermore, our study brings key insights into the significant effect of GPX7 in modulating both immune molecules and in immune cell infiltration in the microenvironment of gliomas, which might impact the patient outcome, opening up future opportunities to regulate the local immune response. |
publishDate |
2022 |
dc.date.accessioned.fl_str_mv |
2022-05-17T19:01:39Z |
dc.date.available.fl_str_mv |
2022-05-17T19:01:39Z |
dc.date.issued.fl_str_mv |
2022 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
FERREIRA, Wallax Augusto Silva et al. Comprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas. Scientific Reports, v. 12, n. 1, p. 1-24, Apr. 2022. |
dc.identifier.uri.fl_str_mv |
https://patua.iec.gov.br/handle/iec/4511 |
dc.identifier.issn.-.fl_str_mv |
2045-2322 |
dc.identifier.doi.-.fl_str_mv |
10.1038/s41598-022-10114-1 |
identifier_str_mv |
FERREIRA, Wallax Augusto Silva et al. Comprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas. Scientific Reports, v. 12, n. 1, p. 1-24, Apr. 2022. 2045-2322 10.1038/s41598-022-10114-1 |
url |
https://patua.iec.gov.br/handle/iec/4511 |
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eng |
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eng |
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info:eu-repo/semantics/openAccess |
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openAccess |
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Nature Research |
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Nature Research |
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