Comprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas

Detalhes bibliográficos
Autor(a) principal: Ferreira, Wallax Augusto Silva
Data de Publicação: 2022
Outros Autores: Vitiello, Glauco Akelinghton Freire, Medina, Tiago da Silva, Oliveira, Edivaldo Herculano Corrêa de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Digital do Instituto Evandro Chagas (Patuá)
Texto Completo: https://patua.iec.gov.br/handle/iec/4511
Resumo: Gliomas are the most commonly occurring malignant brain tumor characterized by an immunosuppressive microenvironment accompanied by profound epigenetic changes, thus influencing the prognosis. Glutathione peroxidase 7 (GPX7) is essential for regulating reactive oxygen species homeostasis under oxidative stress. However, little is known about the function of GPX7 in gliomas. In this study, we hypothesized that GPX7 methylation status could influence biological functions and local immune responses that ultimately impact prognosis in adult gliomas. We conducted an integrated bioinformatics analysis mining GPX7 DNA methylation status, transcriptional and survival data of glioma patients. We discovered that GPX7 was remarkably increased in glioma tissues and cell lines, and was associated with poor prognosis. This upregulation was significantly linked to clinicopathological and molecular features, besides being expressed in a cell cycle-dependent manner. Our results consistently demonstrated that upregulation of GPX7 is tightly modulated by epigenetic processes, which also impacted the overall survival of patients with low-grade gliomas (LGG). Based on the analysis of biological functions, we found that GPX7 might be involved in immune mechanisms involving both innate and adaptive immunity, type I interferon production and regulation of synaptic transmission in LGG, whereas in GBM, it is mainly related to metabolic regulation of mitochondrial dynamics. We also found that GPX7 strongly correlates with immune cell infiltration and diverse immune cell markers, suggesting its role in tumor-specific immune response and in regulating the migration of immune cell types to the tumor microenvironment. Combining these multiple data, we provided the first evidence regarding the epigenetic-mediated regulatory mechanisms underlying GPX7 activation in gliomas. Furthermore, our study brings key insights into the significant effect of GPX7 in modulating both immune molecules and in immune cell infiltration in the microenvironment of gliomas, which might impact the patient outcome, opening up future opportunities to regulate the local immune response.
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spelling Ferreira, Wallax Augusto SilvaVitiello, Glauco Akelinghton FreireMedina, Tiago da SilvaOliveira, Edivaldo Herculano Corrêa de2022-05-17T19:01:39Z2022-05-17T19:01:39Z2022FERREIRA, Wallax Augusto Silva et al. Comprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas. Scientific Reports, v. 12, n. 1, p. 1-24, Apr. 2022.2045-2322https://patua.iec.gov.br/handle/iec/451110.1038/s41598-022-10114-1Gliomas are the most commonly occurring malignant brain tumor characterized by an immunosuppressive microenvironment accompanied by profound epigenetic changes, thus influencing the prognosis. Glutathione peroxidase 7 (GPX7) is essential for regulating reactive oxygen species homeostasis under oxidative stress. However, little is known about the function of GPX7 in gliomas. In this study, we hypothesized that GPX7 methylation status could influence biological functions and local immune responses that ultimately impact prognosis in adult gliomas. We conducted an integrated bioinformatics analysis mining GPX7 DNA methylation status, transcriptional and survival data of glioma patients. We discovered that GPX7 was remarkably increased in glioma tissues and cell lines, and was associated with poor prognosis. This upregulation was significantly linked to clinicopathological and molecular features, besides being expressed in a cell cycle-dependent manner. Our results consistently demonstrated that upregulation of GPX7 is tightly modulated by epigenetic processes, which also impacted the overall survival of patients with low-grade gliomas (LGG). Based on the analysis of biological functions, we found that GPX7 might be involved in immune mechanisms involving both innate and adaptive immunity, type I interferon production and regulation of synaptic transmission in LGG, whereas in GBM, it is mainly related to metabolic regulation of mitochondrial dynamics. We also found that GPX7 strongly correlates with immune cell infiltration and diverse immune cell markers, suggesting its role in tumor-specific immune response and in regulating the migration of immune cell types to the tumor microenvironment. Combining these multiple data, we provided the first evidence regarding the epigenetic-mediated regulatory mechanisms underlying GPX7 activation in gliomas. Furthermore, our study brings key insights into the significant effect of GPX7 in modulating both immune molecules and in immune cell infiltration in the microenvironment of gliomas, which might impact the patient outcome, opening up future opportunities to regulate the local immune response.Instituto Evandro Chagas (Brazil) and Pro-Reitoria de Pesquisa e Pos-GraduacAo (PROPESP/UFPA, Brazil)Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Laboratório de Citogenômica e Mutagênese Ambiental. Ananindeua, PA, BrasilA.C. Camargo Cancer Center. International Research Center. Translational Immuno‑Oncology Group. São Paulo, SP, BrazilA.C. Camargo Cancer Center. International Research Center. Translational Immuno‑Oncology Group. São Paulo, SP, Brazil / National Institute of Science and Technology in Oncogenomics and Therapeutic Innovation. São Paulo, SP, Brazil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Laboratório de Citogenômica e Mutagênese Ambiental. Ananindeua, PA, Brasil / Federal University of Pará. Faculty of Natural Sciences. Institute of Exact and Natural Sciences. Belém, PA, BrazilengNature ResearchComprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomasinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGlioma / imunologiaGlutationa Peroxidase / análiseFatores ImunológicosEstresse Oxidativoinfo:eu-repo/semantics/openAccessreponame:Repositório Digital do Instituto Evandro Chagas (Patuá)instname:Instituto Evandro Chagas (IEC)instacron:IECORIGINALComprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas.pdfComprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas.pdfapplication/pdf91367276https://patua.iec.gov.br/bitstreams/71ff4165-a879-4a06-8fd3-dbf5f3d15775/download56315bd818d6575d43c2e9a29ae46510MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-82182https://patua.iec.gov.br/bitstreams/363846b1-a91e-48fb-9ffa-6cb8fffbdd7b/download11832eea31b16df8613079d742d61793MD52TEXTComprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas.pdf.txtComprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas.pdf.txtExtracted texttext/plain105474https://patua.iec.gov.br/bitstreams/595579a9-b3dc-4708-ad1d-533a5f8c3b28/download5476c28ceabd703f3065e9b69b6100ddMD55THUMBNAILComprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas.pdf.jpgComprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas.pdf.jpgGenerated Thumbnailimage/jpeg5967https://patua.iec.gov.br/bitstreams/2b828995-fe09-4096-be84-49c317bddb69/downloadb1ff4ba969ef15f8ed4477b49177600cMD56iec/45112022-10-20 21:11:22.563oai:patua.iec.gov.br:iec/4511https://patua.iec.gov.brRepositório InstitucionalPUBhttps://patua.iec.gov.br/oai/requestclariceneta@iec.gov.br || Biblioteca@iec.gov.bropendoar:2022-10-20T21:11:22Repositório Digital do Instituto Evandro Chagas (Patuá) - 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dc.title.pt_BR.fl_str_mv Comprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas
title Comprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas
spellingShingle Comprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas
Ferreira, Wallax Augusto Silva
Glioma / imunologia
Glutationa Peroxidase / análise
Fatores Imunológicos
Estresse Oxidativo
title_short Comprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas
title_full Comprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas
title_fullStr Comprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas
title_full_unstemmed Comprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas
title_sort Comprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas
author Ferreira, Wallax Augusto Silva
author_facet Ferreira, Wallax Augusto Silva
Vitiello, Glauco Akelinghton Freire
Medina, Tiago da Silva
Oliveira, Edivaldo Herculano Corrêa de
author_role author
author2 Vitiello, Glauco Akelinghton Freire
Medina, Tiago da Silva
Oliveira, Edivaldo Herculano Corrêa de
author2_role author
author
author
dc.contributor.author.fl_str_mv Ferreira, Wallax Augusto Silva
Vitiello, Glauco Akelinghton Freire
Medina, Tiago da Silva
Oliveira, Edivaldo Herculano Corrêa de
dc.subject.decsPrimary.pt_BR.fl_str_mv Glioma / imunologia
Glutationa Peroxidase / análise
Fatores Imunológicos
Estresse Oxidativo
topic Glioma / imunologia
Glutationa Peroxidase / análise
Fatores Imunológicos
Estresse Oxidativo
description Gliomas are the most commonly occurring malignant brain tumor characterized by an immunosuppressive microenvironment accompanied by profound epigenetic changes, thus influencing the prognosis. Glutathione peroxidase 7 (GPX7) is essential for regulating reactive oxygen species homeostasis under oxidative stress. However, little is known about the function of GPX7 in gliomas. In this study, we hypothesized that GPX7 methylation status could influence biological functions and local immune responses that ultimately impact prognosis in adult gliomas. We conducted an integrated bioinformatics analysis mining GPX7 DNA methylation status, transcriptional and survival data of glioma patients. We discovered that GPX7 was remarkably increased in glioma tissues and cell lines, and was associated with poor prognosis. This upregulation was significantly linked to clinicopathological and molecular features, besides being expressed in a cell cycle-dependent manner. Our results consistently demonstrated that upregulation of GPX7 is tightly modulated by epigenetic processes, which also impacted the overall survival of patients with low-grade gliomas (LGG). Based on the analysis of biological functions, we found that GPX7 might be involved in immune mechanisms involving both innate and adaptive immunity, type I interferon production and regulation of synaptic transmission in LGG, whereas in GBM, it is mainly related to metabolic regulation of mitochondrial dynamics. We also found that GPX7 strongly correlates with immune cell infiltration and diverse immune cell markers, suggesting its role in tumor-specific immune response and in regulating the migration of immune cell types to the tumor microenvironment. Combining these multiple data, we provided the first evidence regarding the epigenetic-mediated regulatory mechanisms underlying GPX7 activation in gliomas. Furthermore, our study brings key insights into the significant effect of GPX7 in modulating both immune molecules and in immune cell infiltration in the microenvironment of gliomas, which might impact the patient outcome, opening up future opportunities to regulate the local immune response.
publishDate 2022
dc.date.accessioned.fl_str_mv 2022-05-17T19:01:39Z
dc.date.available.fl_str_mv 2022-05-17T19:01:39Z
dc.date.issued.fl_str_mv 2022
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dc.identifier.citation.fl_str_mv FERREIRA, Wallax Augusto Silva et al. Comprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas. Scientific Reports, v. 12, n. 1, p. 1-24, Apr. 2022.
dc.identifier.uri.fl_str_mv https://patua.iec.gov.br/handle/iec/4511
dc.identifier.issn.-.fl_str_mv 2045-2322
dc.identifier.doi.-.fl_str_mv 10.1038/s41598-022-10114-1
identifier_str_mv FERREIRA, Wallax Augusto Silva et al. Comprehensive analysis of epigenetics regulation, prognostic and the correlation with immune infiltrates of GPX7 in adult gliomas. Scientific Reports, v. 12, n. 1, p. 1-24, Apr. 2022.
2045-2322
10.1038/s41598-022-10114-1
url https://patua.iec.gov.br/handle/iec/4511
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