The pressure pan evolution of human erythrovirus B19 in the Amazon
Autor(a) principal: | |
---|---|
Data de Publicação: | 2007 |
Outros Autores: | , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Digital do Instituto Evandro Chagas (Patuá) |
Texto Completo: | https://patua.iec.gov.br/handle/iec/3260 |
Resumo: | To understand the evolutionary dynamics of human parvovirus B19, we analyzed VP1 and VP2 gene sequences of B19 sampled from Belém (Amazon), the city of São Paulo, Brazil and globally. Our analysis revealed a strikingly different pattern of evolutionary change for those viral lineages introduced into Belém, which exhibited a higher rate of nonsynonymous substitutions compared to those viruses sampled from other locations. We propose that difference this is due to the high prevalence of B19 in Belem (up to 85 per cent) compared to other locations (prevalenceÆs of approximately 50 per cent), which imposes a more intense selection pressure. Hence, those B19 lineages introduced into Belem experienced an elevated rate of amino acid change, driven by positive selection, in order to generate serial re-infections in a small web of transmission, which can be thought of as an evolutionary "pressure pan" |
id |
IEC-2_b25ec7c0cba03f822fec5d62edd623f4 |
---|---|
oai_identifier_str |
oai:patua.iec.gov.br:iec/3260 |
network_acronym_str |
IEC-2 |
network_name_str |
Repositório Digital do Instituto Evandro Chagas (Patuá) |
repository_id_str |
|
spelling |
Freitas, Ronaldo Barros deDurigon, Edison LuizOliveira, Darleise de SouzaRomano, Camila MaltaFreitas, Maria Rute CastroLinhares, Alexandre da CostaMelo, Fernando LucasWalshkeller, LílianBarbosa, Maria LuizaHuatuco, Egma M. MaytaHolmes, Edward CZanotto, Paolo Marinho de A2018-07-18T14:21:46Z2018-07-18T14:21:46Z20070042-6822https://patua.iec.gov.br/handle/iec/3260To understand the evolutionary dynamics of human parvovirus B19, we analyzed VP1 and VP2 gene sequences of B19 sampled from Belém (Amazon), the city of São Paulo, Brazil and globally. Our analysis revealed a strikingly different pattern of evolutionary change for those viral lineages introduced into Belém, which exhibited a higher rate of nonsynonymous substitutions compared to those viruses sampled from other locations. We propose that difference this is due to the high prevalence of B19 in Belem (up to 85 per cent) compared to other locations (prevalenceÆs of approximately 50 per cent), which imposes a more intense selection pressure. Hence, those B19 lineages introduced into Belem experienced an elevated rate of amino acid change, driven by positive selection, in order to generate serial re-infections in a small web of transmission, which can be thought of as an evolutionary "pressure pan"This study was supported by CNPq, MCT and FAPESP projects 00/04205-06 and 00/11511-06-VGDN program. ELD and PMAZ hold a PQ-CNPq scholarship. CMR and FLM hold a CAPES scholarshipMinistério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Belém, PA, Brasil.Universidade de São Paulo. Instituto de Ciências Biomédicas. Departamento de Micobiologia. Laboratório de Virologia Clinica. São Paulo, SP, Brazil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Belém, PA, Brasil.Universidade de São Paulo USP. Departamento de Microbiologia. Laboratório de Evolução Molecular e Bioinformática. São Paulo, SP, Brazil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Belém, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Belém, PA, Brasil.Universidade de São Paulo USP. Departamento de Microbiologia. Laboratório de Evolução Molecular e Bioinformática. São Paulo, SP, Brazil.Universidade de São Paulo. Instituto de Ciências Biomédicas. Departamento de Micobiologia. Laboratório de Virologia Clinica. São Paulo, SP, Brazil.Instituto Adolfo Lutz. São Paulo, SP, Brazil.University of San Marcos. Lima, Peru.The Pennsylvania State University. Department of Biology. Center for Infectious Disease Dynamics. University Park, PA, USA.Universidade de São Paulo USP. Departamento de Microbiologia. Laboratório de Evolução Molecular e Bioinformática. São Paulo, SP, Brazil.engElsevierThe pressure pan evolution of human erythrovirus B19 in the Amazoninfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleParvovirus B19 HumanoFilogeniainfo:eu-repo/semantics/openAccessreponame:Repositório Digital do Instituto Evandro Chagas (Patuá)instname:Instituto Evandro Chagas (IEC)instacron:IECORIGINALThe "pressure pan” evolution of human erythrovirus B19 in the Amazon.pdfThe "pressure pan” evolution of human erythrovirus B19 in the Amazon.pdfapplication/pdf596864https://patua.iec.gov.br/bitstreams/7429e5dd-4421-4a21-a26e-b20e0ba72e7d/download61a8dcbd158e7e1039190dc2b1a6d169MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-871https://patua.iec.gov.br/bitstreams/b51e969c-6902-4399-99af-228a9e47507b/download52f1732ea66fbd1123abe39f5373b797MD52TEXTThe "pressure pan” evolution of human erythrovirus B19 in the Amazon.pdf.txtThe "pressure pan” evolution of human erythrovirus B19 in the Amazon.pdf.txtExtracted texttext/plain29597https://patua.iec.gov.br/bitstreams/21f6c428-4c65-4428-89dd-7fe3b660d0ed/downloadad3aa71ab4498e01c40ca2aec06ee0eaMD55THUMBNAILThe "pressure pan” evolution of human erythrovirus B19 in the Amazon.pdf.jpgThe "pressure pan” evolution of human erythrovirus B19 in the Amazon.pdf.jpgGenerated Thumbnailimage/jpeg5613https://patua.iec.gov.br/bitstreams/5ace7ecd-7d07-4636-ac57-1c8fe901dce5/download232bb1e410646d9df43add781cdffb57MD56iec/32602022-10-21 00:22:04.078oai:patua.iec.gov.br:iec/3260https://patua.iec.gov.brRepositório InstitucionalPUBhttps://patua.iec.gov.br/oai/requestclariceneta@iec.gov.br || Biblioteca@iec.gov.bropendoar:2022-10-21T00:22:04Repositório Digital do Instituto Evandro Chagas (Patuá) - Instituto Evandro Chagas (IEC)falseVG9kb3Mgb3MgZG9jdW1lbnRvcyBkZXNzYSBjb2xlw6fDo28gc2VndWVtIGEgTGljZW7Dp2EgQ3JlYXRpdmUgY29tbW9ucy4= |
dc.title.pt_BR.fl_str_mv |
The pressure pan evolution of human erythrovirus B19 in the Amazon |
title |
The pressure pan evolution of human erythrovirus B19 in the Amazon |
spellingShingle |
The pressure pan evolution of human erythrovirus B19 in the Amazon Freitas, Ronaldo Barros de Parvovirus B19 Humano Filogenia |
title_short |
The pressure pan evolution of human erythrovirus B19 in the Amazon |
title_full |
The pressure pan evolution of human erythrovirus B19 in the Amazon |
title_fullStr |
The pressure pan evolution of human erythrovirus B19 in the Amazon |
title_full_unstemmed |
The pressure pan evolution of human erythrovirus B19 in the Amazon |
title_sort |
The pressure pan evolution of human erythrovirus B19 in the Amazon |
author |
Freitas, Ronaldo Barros de |
author_facet |
Freitas, Ronaldo Barros de Durigon, Edison Luiz Oliveira, Darleise de Souza Romano, Camila Malta Freitas, Maria Rute Castro Linhares, Alexandre da Costa Melo, Fernando Lucas Walshkeller, Lílian Barbosa, Maria Luiza Huatuco, Egma M. Mayta Holmes, Edward C Zanotto, Paolo Marinho de A |
author_role |
author |
author2 |
Durigon, Edison Luiz Oliveira, Darleise de Souza Romano, Camila Malta Freitas, Maria Rute Castro Linhares, Alexandre da Costa Melo, Fernando Lucas Walshkeller, Lílian Barbosa, Maria Luiza Huatuco, Egma M. Mayta Holmes, Edward C Zanotto, Paolo Marinho de A |
author2_role |
author author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Freitas, Ronaldo Barros de Durigon, Edison Luiz Oliveira, Darleise de Souza Romano, Camila Malta Freitas, Maria Rute Castro Linhares, Alexandre da Costa Melo, Fernando Lucas Walshkeller, Lílian Barbosa, Maria Luiza Huatuco, Egma M. Mayta Holmes, Edward C Zanotto, Paolo Marinho de A |
dc.subject.decsPrimary.pt_BR.fl_str_mv |
Parvovirus B19 Humano Filogenia |
topic |
Parvovirus B19 Humano Filogenia |
description |
To understand the evolutionary dynamics of human parvovirus B19, we analyzed VP1 and VP2 gene sequences of B19 sampled from Belém (Amazon), the city of São Paulo, Brazil and globally. Our analysis revealed a strikingly different pattern of evolutionary change for those viral lineages introduced into Belém, which exhibited a higher rate of nonsynonymous substitutions compared to those viruses sampled from other locations. We propose that difference this is due to the high prevalence of B19 in Belem (up to 85 per cent) compared to other locations (prevalenceÆs of approximately 50 per cent), which imposes a more intense selection pressure. Hence, those B19 lineages introduced into Belem experienced an elevated rate of amino acid change, driven by positive selection, in order to generate serial re-infections in a small web of transmission, which can be thought of as an evolutionary "pressure pan" |
publishDate |
2007 |
dc.date.issued.fl_str_mv |
2007 |
dc.date.accessioned.fl_str_mv |
2018-07-18T14:21:46Z |
dc.date.available.fl_str_mv |
2018-07-18T14:21:46Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://patua.iec.gov.br/handle/iec/3260 |
dc.identifier.issn.-.fl_str_mv |
0042-6822 |
identifier_str_mv |
0042-6822 |
url |
https://patua.iec.gov.br/handle/iec/3260 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.publisher.none.fl_str_mv |
Elsevier |
publisher.none.fl_str_mv |
Elsevier |
dc.source.none.fl_str_mv |
reponame:Repositório Digital do Instituto Evandro Chagas (Patuá) instname:Instituto Evandro Chagas (IEC) instacron:IEC |
instname_str |
Instituto Evandro Chagas (IEC) |
instacron_str |
IEC |
institution |
IEC |
reponame_str |
Repositório Digital do Instituto Evandro Chagas (Patuá) |
collection |
Repositório Digital do Instituto Evandro Chagas (Patuá) |
bitstream.url.fl_str_mv |
https://patua.iec.gov.br/bitstreams/7429e5dd-4421-4a21-a26e-b20e0ba72e7d/download https://patua.iec.gov.br/bitstreams/b51e969c-6902-4399-99af-228a9e47507b/download https://patua.iec.gov.br/bitstreams/21f6c428-4c65-4428-89dd-7fe3b660d0ed/download https://patua.iec.gov.br/bitstreams/5ace7ecd-7d07-4636-ac57-1c8fe901dce5/download |
bitstream.checksum.fl_str_mv |
61a8dcbd158e7e1039190dc2b1a6d169 52f1732ea66fbd1123abe39f5373b797 ad3aa71ab4498e01c40ca2aec06ee0ea 232bb1e410646d9df43add781cdffb57 |
bitstream.checksumAlgorithm.fl_str_mv |
MD5 MD5 MD5 MD5 |
repository.name.fl_str_mv |
Repositório Digital do Instituto Evandro Chagas (Patuá) - Instituto Evandro Chagas (IEC) |
repository.mail.fl_str_mv |
clariceneta@iec.gov.br || Biblioteca@iec.gov.br |
_version_ |
1787533078274506752 |