Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region

Detalhes bibliográficos
Autor(a) principal: Lima, Luana Nepomuceno Gondim Costa
Data de Publicação: 2018
Outros Autores: Frota, Cristiane Cunha, Suffys, Philip Noel, Fontes, Amanda Nogueira Brum, Mota, Rosa Maria Salani, Almeida, Rosa Lívia Freitas de, Pontes, Maria Araci de Andrade, Gonçalves, Heitor de Sá, Kendall, Carl, Kerr, Ligia Regina Sansigolo
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Digital do Instituto Evandro Chagas (Patuá)
Texto Completo: https://patua.iec.gov.br/handle/iec/3065
Resumo: This study analyzed the genetic diversity by MIRU-VNTR of Mycobacterium leprae isolates from nasal cavities and related to epidemiological and clinical data. The sample consisted of 48 newly diagnosed leprosy cases that tested positive for M. leprae PCR in nasal secretion (NS) attending to the National Reference Center of Dermatology Dona Libania (CDERM), Fortaleza, Brazil. Total DNA was extracted from NS of each patient and used for amplification of four M. leprae VNTR loci. Four clusters of M. leprae isolates were formed with identical genotypes. In the spatial analysis, 12 leprosy cases presented similar genotypes organized into 4 clusters. The most common genotypes in the current study was AC8b: 8, AC9: 7, AC8a: 8, GTA9: 10, which may represent a genotype of circulating strains most often in Ceará. A minimum set of four MIRU-VNTR loci was demonstrated to study the genetic diversity of M. leprae isolates from NS.
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spelling Lima, Luana Nepomuceno Gondim CostaFrota, Cristiane CunhaSuffys, Philip NoelFontes, Amanda Nogueira BrumMota, Rosa Maria SalaniAlmeida, Rosa Lívia Freitas dePontes, Maria Araci de AndradeGonçalves, Heitor de SáKendall, CarlKerr, Ligia Regina Sansigolo2018-03-01T13:49:15Z2018-03-01T13:49:15Z2018LIMA, Luana Nepomuceno Gondim Costa et al. Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region. Pathogens and Global Health, v. 112, n. 2, p. 79-85, Mar. 2018.2047-7724https://patua.iec.gov.br/handle/iec/306510.1080/20477724.2018.1427308This study analyzed the genetic diversity by MIRU-VNTR of Mycobacterium leprae isolates from nasal cavities and related to epidemiological and clinical data. The sample consisted of 48 newly diagnosed leprosy cases that tested positive for M. leprae PCR in nasal secretion (NS) attending to the National Reference Center of Dermatology Dona Libania (CDERM), Fortaleza, Brazil. Total DNA was extracted from NS of each patient and used for amplification of four M. leprae VNTR loci. Four clusters of M. leprae isolates were formed with identical genotypes. In the spatial analysis, 12 leprosy cases presented similar genotypes organized into 4 clusters. The most common genotypes in the current study was AC8b: 8, AC9: 7, AC8a: 8, GTA9: 10, which may represent a genotype of circulating strains most often in Ceará. A minimum set of four MIRU-VNTR loci was demonstrated to study the genetic diversity of M. leprae isolates from NS.Conselho Nacional de Desenvolvimento Científico e Tecnológico, Brazil under [grant number CNPq–410573/2006-0].Federal University of Ceará. Faculdade de Medicina. Departamento de Patologia e Medicina Legal. Fortaleza, CE, Brazil / Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Federal University of Ceará. Faculdade de Medicina. Departamento de Patologia e Medicina Legal. Fortaleza, CE, Brazil.Fundação Osvaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Biologia Molecular Aplicada a Micobactérias. Rio de Janeiro, RJ, Brasil.Fundação Osvaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Biologia Molecular Aplicada a Micobactérias. Rio de Janeiro, RJ, Brasil.Federal University of Ceará. Departamento de Estatística e Matemática Aplicada. Fortaleza, CE, Brazil.Universidade de Fortaleza. Programa de Pós-Graduação em Saúde Coletiva. Fortaleza, CE, Brazil.Centro de Dermatologia Dona Libânia. Department of the State of Ceará. Fortaleza, CE, Brazil.Centro de Dermatologia Dona Libânia. Department of the State of Ceará. Fortaleza, CE, Brazil.Tulane University. School of Public Health and Tropical Medicine. Department of Global Community Health and Behavioral Sciences. New Orleans , LA , USA.Federal University of Ceará. Faculdade de Medicina. Departamento de Saúde Comunitária. Fortaleza, CE, Brazil.engTaylor & FrancisGenotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic regioninfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleHanseníase / diagnósticoMycobacterium leprae / patogenicidadeCavidade Nasal / patologiaReação em Cadeia da Polimerase / métodosGenótipoBiomarcadoresinfo:eu-repo/semantics/openAccessreponame:Repositório Digital do Instituto Evandro Chagas (Patuá)instname:Instituto Evandro Chagas (IEC)instacron:IECLICENSElicense.txtlicense.txttext/plain; charset=utf-871https://patua.iec.gov.br/bitstreams/593709ed-fa85-4562-b1a4-97b4d3000fb3/download52f1732ea66fbd1123abe39f5373b797MD52TEXTGenotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region.pdf.txtGenotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region.pdf.txtExtracted texttext/plain35849https://patua.iec.gov.br/bitstreams/745bf4a1-204b-431b-903b-61a4c3e09985/download5f1cbfa1fb9d71dcf69cabde4d760ffcMD510THUMBNAILGenotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region.pdf.jpgGenotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region.pdf.jpgGenerated Thumbnailimage/jpeg5663https://patua.iec.gov.br/bitstreams/5253e432-84be-4f39-85ba-ebeb4def170a/downloadb3ba3ed35300042a64bcf8e7c4d1a516MD511ORIGINALGenotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region.pdfGenotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region.pdfapplication/pdf645055https://patua.iec.gov.br/bitstreams/1badf678-c0ad-4fc7-89c7-408f3e1fc374/downloadede94f4ad07139f3f2867de2ccb3301aMD59iec/30652022-10-20 22:18:58.377oai:patua.iec.gov.br:iec/3065https://patua.iec.gov.brRepositório InstitucionalPUBhttps://patua.iec.gov.br/oai/requestclariceneta@iec.gov.br || Biblioteca@iec.gov.bropendoar:2022-10-20T22:18:58Repositório Digital do Instituto Evandro Chagas (Patuá) - Instituto Evandro Chagas (IEC)falseVG9kb3Mgb3MgZG9jdW1lbnRvcyBkZXNzYSBjb2xlw6fDo28gc2VndWVtIGEgTGljZW7Dp2EgQ3JlYXRpdmUgY29tbW9ucy4=
dc.title.pt_BR.fl_str_mv Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region
title Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region
spellingShingle Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region
Lima, Luana Nepomuceno Gondim Costa
Hanseníase / diagnóstico
Mycobacterium leprae / patogenicidade
Cavidade Nasal / patologia
Reação em Cadeia da Polimerase / métodos
Genótipo
Biomarcadores
title_short Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region
title_full Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region
title_fullStr Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region
title_full_unstemmed Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region
title_sort Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region
author Lima, Luana Nepomuceno Gondim Costa
author_facet Lima, Luana Nepomuceno Gondim Costa
Frota, Cristiane Cunha
Suffys, Philip Noel
Fontes, Amanda Nogueira Brum
Mota, Rosa Maria Salani
Almeida, Rosa Lívia Freitas de
Pontes, Maria Araci de Andrade
Gonçalves, Heitor de Sá
Kendall, Carl
Kerr, Ligia Regina Sansigolo
author_role author
author2 Frota, Cristiane Cunha
Suffys, Philip Noel
Fontes, Amanda Nogueira Brum
Mota, Rosa Maria Salani
Almeida, Rosa Lívia Freitas de
Pontes, Maria Araci de Andrade
Gonçalves, Heitor de Sá
Kendall, Carl
Kerr, Ligia Regina Sansigolo
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Lima, Luana Nepomuceno Gondim Costa
Frota, Cristiane Cunha
Suffys, Philip Noel
Fontes, Amanda Nogueira Brum
Mota, Rosa Maria Salani
Almeida, Rosa Lívia Freitas de
Pontes, Maria Araci de Andrade
Gonçalves, Heitor de Sá
Kendall, Carl
Kerr, Ligia Regina Sansigolo
dc.subject.decsPrimary.pt_BR.fl_str_mv Hanseníase / diagnóstico
Mycobacterium leprae / patogenicidade
Cavidade Nasal / patologia
Reação em Cadeia da Polimerase / métodos
Genótipo
Biomarcadores
topic Hanseníase / diagnóstico
Mycobacterium leprae / patogenicidade
Cavidade Nasal / patologia
Reação em Cadeia da Polimerase / métodos
Genótipo
Biomarcadores
description This study analyzed the genetic diversity by MIRU-VNTR of Mycobacterium leprae isolates from nasal cavities and related to epidemiological and clinical data. The sample consisted of 48 newly diagnosed leprosy cases that tested positive for M. leprae PCR in nasal secretion (NS) attending to the National Reference Center of Dermatology Dona Libania (CDERM), Fortaleza, Brazil. Total DNA was extracted from NS of each patient and used for amplification of four M. leprae VNTR loci. Four clusters of M. leprae isolates were formed with identical genotypes. In the spatial analysis, 12 leprosy cases presented similar genotypes organized into 4 clusters. The most common genotypes in the current study was AC8b: 8, AC9: 7, AC8a: 8, GTA9: 10, which may represent a genotype of circulating strains most often in Ceará. A minimum set of four MIRU-VNTR loci was demonstrated to study the genetic diversity of M. leprae isolates from NS.
publishDate 2018
dc.date.accessioned.fl_str_mv 2018-03-01T13:49:15Z
dc.date.available.fl_str_mv 2018-03-01T13:49:15Z
dc.date.issued.fl_str_mv 2018
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dc.identifier.citation.fl_str_mv LIMA, Luana Nepomuceno Gondim Costa et al. Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region. Pathogens and Global Health, v. 112, n. 2, p. 79-85, Mar. 2018.
dc.identifier.uri.fl_str_mv https://patua.iec.gov.br/handle/iec/3065
dc.identifier.issn.-.fl_str_mv 2047-7724
dc.identifier.doi.-.fl_str_mv 10.1080/20477724.2018.1427308
identifier_str_mv LIMA, Luana Nepomuceno Gondim Costa et al. Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region. Pathogens and Global Health, v. 112, n. 2, p. 79-85, Mar. 2018.
2047-7724
10.1080/20477724.2018.1427308
url https://patua.iec.gov.br/handle/iec/3065
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