Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region
Autor(a) principal: | |
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Data de Publicação: | 2018 |
Outros Autores: | , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Digital do Instituto Evandro Chagas (Patuá) |
Texto Completo: | https://patua.iec.gov.br/handle/iec/3065 |
Resumo: | This study analyzed the genetic diversity by MIRU-VNTR of Mycobacterium leprae isolates from nasal cavities and related to epidemiological and clinical data. The sample consisted of 48 newly diagnosed leprosy cases that tested positive for M. leprae PCR in nasal secretion (NS) attending to the National Reference Center of Dermatology Dona Libania (CDERM), Fortaleza, Brazil. Total DNA was extracted from NS of each patient and used for amplification of four M. leprae VNTR loci. Four clusters of M. leprae isolates were formed with identical genotypes. In the spatial analysis, 12 leprosy cases presented similar genotypes organized into 4 clusters. The most common genotypes in the current study was AC8b: 8, AC9: 7, AC8a: 8, GTA9: 10, which may represent a genotype of circulating strains most often in Ceará. A minimum set of four MIRU-VNTR loci was demonstrated to study the genetic diversity of M. leprae isolates from NS. |
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Lima, Luana Nepomuceno Gondim CostaFrota, Cristiane CunhaSuffys, Philip NoelFontes, Amanda Nogueira BrumMota, Rosa Maria SalaniAlmeida, Rosa Lívia Freitas dePontes, Maria Araci de AndradeGonçalves, Heitor de SáKendall, CarlKerr, Ligia Regina Sansigolo2018-03-01T13:49:15Z2018-03-01T13:49:15Z2018LIMA, Luana Nepomuceno Gondim Costa et al. Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region. Pathogens and Global Health, v. 112, n. 2, p. 79-85, Mar. 2018.2047-7724https://patua.iec.gov.br/handle/iec/306510.1080/20477724.2018.1427308This study analyzed the genetic diversity by MIRU-VNTR of Mycobacterium leprae isolates from nasal cavities and related to epidemiological and clinical data. The sample consisted of 48 newly diagnosed leprosy cases that tested positive for M. leprae PCR in nasal secretion (NS) attending to the National Reference Center of Dermatology Dona Libania (CDERM), Fortaleza, Brazil. Total DNA was extracted from NS of each patient and used for amplification of four M. leprae VNTR loci. Four clusters of M. leprae isolates were formed with identical genotypes. In the spatial analysis, 12 leprosy cases presented similar genotypes organized into 4 clusters. The most common genotypes in the current study was AC8b: 8, AC9: 7, AC8a: 8, GTA9: 10, which may represent a genotype of circulating strains most often in Ceará. A minimum set of four MIRU-VNTR loci was demonstrated to study the genetic diversity of M. leprae isolates from NS.Conselho Nacional de Desenvolvimento Científico e Tecnológico, Brazil under [grant number CNPq–410573/2006-0].Federal University of Ceará. Faculdade de Medicina. Departamento de Patologia e Medicina Legal. Fortaleza, CE, Brazil / Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Federal University of Ceará. Faculdade de Medicina. Departamento de Patologia e Medicina Legal. Fortaleza, CE, Brazil.Fundação Osvaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Biologia Molecular Aplicada a Micobactérias. Rio de Janeiro, RJ, Brasil.Fundação Osvaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Biologia Molecular Aplicada a Micobactérias. Rio de Janeiro, RJ, Brasil.Federal University of Ceará. Departamento de Estatística e Matemática Aplicada. Fortaleza, CE, Brazil.Universidade de Fortaleza. Programa de Pós-Graduação em Saúde Coletiva. Fortaleza, CE, Brazil.Centro de Dermatologia Dona Libânia. Department of the State of Ceará. Fortaleza, CE, Brazil.Centro de Dermatologia Dona Libânia. Department of the State of Ceará. Fortaleza, CE, Brazil.Tulane University. School of Public Health and Tropical Medicine. Department of Global Community Health and Behavioral Sciences. New Orleans , LA , USA.Federal University of Ceará. Faculdade de Medicina. Departamento de Saúde Comunitária. Fortaleza, CE, Brazil.engTaylor & FrancisGenotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic regioninfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleHanseníase / diagnósticoMycobacterium leprae / patogenicidadeCavidade Nasal / patologiaReação em Cadeia da Polimerase / métodosGenótipoBiomarcadoresinfo:eu-repo/semantics/openAccessreponame:Repositório Digital do Instituto Evandro Chagas (Patuá)instname:Instituto Evandro Chagas (IEC)instacron:IECLICENSElicense.txtlicense.txttext/plain; charset=utf-871https://patua.iec.gov.br/bitstreams/593709ed-fa85-4562-b1a4-97b4d3000fb3/download52f1732ea66fbd1123abe39f5373b797MD52TEXTGenotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region.pdf.txtGenotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region.pdf.txtExtracted texttext/plain35849https://patua.iec.gov.br/bitstreams/745bf4a1-204b-431b-903b-61a4c3e09985/download5f1cbfa1fb9d71dcf69cabde4d760ffcMD510THUMBNAILGenotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region.pdf.jpgGenotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region.pdf.jpgGenerated Thumbnailimage/jpeg5663https://patua.iec.gov.br/bitstreams/5253e432-84be-4f39-85ba-ebeb4def170a/downloadb3ba3ed35300042a64bcf8e7c4d1a516MD511ORIGINALGenotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region.pdfGenotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region.pdfapplication/pdf645055https://patua.iec.gov.br/bitstreams/1badf678-c0ad-4fc7-89c7-408f3e1fc374/downloadede94f4ad07139f3f2867de2ccb3301aMD59iec/30652022-10-20 22:18:58.377oai:patua.iec.gov.br:iec/3065https://patua.iec.gov.brRepositório InstitucionalPUBhttps://patua.iec.gov.br/oai/requestclariceneta@iec.gov.br || Biblioteca@iec.gov.bropendoar:2022-10-20T22:18:58Repositório Digital do Instituto Evandro Chagas (Patuá) - Instituto Evandro Chagas (IEC)falseVG9kb3Mgb3MgZG9jdW1lbnRvcyBkZXNzYSBjb2xlw6fDo28gc2VndWVtIGEgTGljZW7Dp2EgQ3JlYXRpdmUgY29tbW9ucy4= |
dc.title.pt_BR.fl_str_mv |
Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region |
title |
Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region |
spellingShingle |
Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region Lima, Luana Nepomuceno Gondim Costa Hanseníase / diagnóstico Mycobacterium leprae / patogenicidade Cavidade Nasal / patologia Reação em Cadeia da Polimerase / métodos Genótipo Biomarcadores |
title_short |
Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region |
title_full |
Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region |
title_fullStr |
Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region |
title_full_unstemmed |
Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region |
title_sort |
Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region |
author |
Lima, Luana Nepomuceno Gondim Costa |
author_facet |
Lima, Luana Nepomuceno Gondim Costa Frota, Cristiane Cunha Suffys, Philip Noel Fontes, Amanda Nogueira Brum Mota, Rosa Maria Salani Almeida, Rosa Lívia Freitas de Pontes, Maria Araci de Andrade Gonçalves, Heitor de Sá Kendall, Carl Kerr, Ligia Regina Sansigolo |
author_role |
author |
author2 |
Frota, Cristiane Cunha Suffys, Philip Noel Fontes, Amanda Nogueira Brum Mota, Rosa Maria Salani Almeida, Rosa Lívia Freitas de Pontes, Maria Araci de Andrade Gonçalves, Heitor de Sá Kendall, Carl Kerr, Ligia Regina Sansigolo |
author2_role |
author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Lima, Luana Nepomuceno Gondim Costa Frota, Cristiane Cunha Suffys, Philip Noel Fontes, Amanda Nogueira Brum Mota, Rosa Maria Salani Almeida, Rosa Lívia Freitas de Pontes, Maria Araci de Andrade Gonçalves, Heitor de Sá Kendall, Carl Kerr, Ligia Regina Sansigolo |
dc.subject.decsPrimary.pt_BR.fl_str_mv |
Hanseníase / diagnóstico Mycobacterium leprae / patogenicidade Cavidade Nasal / patologia Reação em Cadeia da Polimerase / métodos Genótipo Biomarcadores |
topic |
Hanseníase / diagnóstico Mycobacterium leprae / patogenicidade Cavidade Nasal / patologia Reação em Cadeia da Polimerase / métodos Genótipo Biomarcadores |
description |
This study analyzed the genetic diversity by MIRU-VNTR of Mycobacterium leprae isolates from nasal cavities and related to epidemiological and clinical data. The sample consisted of 48 newly diagnosed leprosy cases that tested positive for M. leprae PCR in nasal secretion (NS) attending to the National Reference Center of Dermatology Dona Libania (CDERM), Fortaleza, Brazil. Total DNA was extracted from NS of each patient and used for amplification of four M. leprae VNTR loci. Four clusters of M. leprae isolates were formed with identical genotypes. In the spatial analysis, 12 leprosy cases presented similar genotypes organized into 4 clusters. The most common genotypes in the current study was AC8b: 8, AC9: 7, AC8a: 8, GTA9: 10, which may represent a genotype of circulating strains most often in Ceará. A minimum set of four MIRU-VNTR loci was demonstrated to study the genetic diversity of M. leprae isolates from NS. |
publishDate |
2018 |
dc.date.accessioned.fl_str_mv |
2018-03-01T13:49:15Z |
dc.date.available.fl_str_mv |
2018-03-01T13:49:15Z |
dc.date.issued.fl_str_mv |
2018 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
LIMA, Luana Nepomuceno Gondim Costa et al. Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region. Pathogens and Global Health, v. 112, n. 2, p. 79-85, Mar. 2018. |
dc.identifier.uri.fl_str_mv |
https://patua.iec.gov.br/handle/iec/3065 |
dc.identifier.issn.-.fl_str_mv |
2047-7724 |
dc.identifier.doi.-.fl_str_mv |
10.1080/20477724.2018.1427308 |
identifier_str_mv |
LIMA, Luana Nepomuceno Gondim Costa et al. Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region. Pathogens and Global Health, v. 112, n. 2, p. 79-85, Mar. 2018. 2047-7724 10.1080/20477724.2018.1427308 |
url |
https://patua.iec.gov.br/handle/iec/3065 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.publisher.none.fl_str_mv |
Taylor & Francis |
publisher.none.fl_str_mv |
Taylor & Francis |
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IEC |
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IEC |
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Repositório Digital do Instituto Evandro Chagas (Patuá) |
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Repositório Digital do Instituto Evandro Chagas (Patuá) |
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