Genetic characterization of the Patois Serogroup (Genus Orthobunyavirus; Family Peribunyaviridae) and evidence that Estero Real Virus is a member of the Genus Orthonairovirus
Autor(a) principal: | |
---|---|
Data de Publicação: | 2018 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Digital do Instituto Evandro Chagas (Patuá) |
Texto Completo: | https://patua.iec.gov.br/handle/iec/3860 |
Resumo: | Estero Real virus (ERV) was isolated in 1980 from Ornithodoros tadaridae ticks collected in El Estero Real, Sancti Spiritus, Cuba. Antigenic characterization of the isolate based on serological methods found a relationship with Abras and Zegla viruses and, consequently, the virus was classified taxonomically within the Patois serogroup. Given the fact that genetic characterization of Patois serogroup viruses has not yet been reported and that ERV is the only virus within the Patois serogroup isolated from ticks, we recently conducted nearly complete genome sequencing in an attempt to gain further insight into the genetic relationship of ERV with other Patois serogroup viruses and members of Peribunyaviridae family (Bunyavirales order). With the exception of ERV, our sequencing and phylogenetic studies revealed the close relationship of the Patois serogroup viruses to each other, forming a clear divergent clade from other members of the Orthobunyavirus genus (Peribunyaviridae family). Notably, our analysis also revealed that ERV forms a monophyletic clade that is closely related to species of the Orthonairovirus genus (Nairoviridae family) in all the genome segments. In light of these findings, we believe that the taxonomic classification of ERV should be revised. |
id |
IEC-2_fe6b0fe025bdb5905700fe6005736b18 |
---|---|
oai_identifier_str |
oai:patua.iec.gov.br:iec/3860 |
network_acronym_str |
IEC-2 |
network_name_str |
Repositório Digital do Instituto Evandro Chagas (Patuá) |
repository_id_str |
|
spelling |
Aguilar, Patricia VSouza, William Marciel deSilvas, Jesus AWood, ThomasWiden, StevenFumagalli, Marcílio JorgeNunes, Márcio Roberto Teixeira2019-08-28T12:59:19Z2019-08-28T12:59:19Z2018AGUILAR, Patricia V. et al. Genetic characterization of the Patois Serogroup (Genus Orthobunyavirus; Family Peribunyaviridae) and evidence that Estero Real Virus is a member of the Genus Orthonairovirus. The American Journal of Tropical Medicine and Hygiene, v. 99, n. 2, p. 451-457, Aug. 2018. DOI: https://doi.org/10.4269/ajtmh.18-0201. Disponível em: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6090349/pdf/tpmd180201.pdf.0002-9637https://patua.iec.gov.br/handle/iec/386010.4269/ajtmh.18-0201Estero Real virus (ERV) was isolated in 1980 from Ornithodoros tadaridae ticks collected in El Estero Real, Sancti Spiritus, Cuba. Antigenic characterization of the isolate based on serological methods found a relationship with Abras and Zegla viruses and, consequently, the virus was classified taxonomically within the Patois serogroup. Given the fact that genetic characterization of Patois serogroup viruses has not yet been reported and that ERV is the only virus within the Patois serogroup isolated from ticks, we recently conducted nearly complete genome sequencing in an attempt to gain further insight into the genetic relationship of ERV with other Patois serogroup viruses and members of Peribunyaviridae family (Bunyavirales order). With the exception of ERV, our sequencing and phylogenetic studies revealed the close relationship of the Patois serogroup viruses to each other, forming a clear divergent clade from other members of the Orthobunyavirus genus (Peribunyaviridae family). Notably, our analysis also revealed that ERV forms a monophyletic clade that is closely related to species of the Orthonairovirus genus (Nairoviridae family) in all the genome segments. In light of these findings, we believe that the taxonomic classification of ERV should be revised.F31 AI124662/AI/NIAID NIH HHS/United States R24 AI120942/AI/NIAID NIH HHS/United StatesUniversity of Texas Medical Branch. Department of Pathology. Galveston, Texas, USA / Institute for Human Infection and Immunity. Galveston, Texas, USA / Center for Tropical Diseases. Galveston, Texas, USA.University of São Paulo. School of Medicine of Ribeirão Preto. Virology Research Center. Ribeirão Preto, SP, Brazil.University of Texas Medical Branch. Department of Pathology. Galveston, Texas, USA / Institute for Human Infection and Immunity. Galveston, Texas, USA / Center for Tropical Diseases. Galveston, Texas, USA.University of Texas Medical Branch. Department of Biochemistry and Molecular Biology. Galveston, Texas, USA.University of Texas Medical Branch. Department of Biochemistry and Molecular Biology. Galveston, Texas, USA.University of São Paulo. School of Medicine of Ribeirão Preto. Virology Research Center. Ribeirão Preto, SP, Brazil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.engAmerican Society of Tropical Medicine and HygieneGenetic characterization of the Patois Serogroup (Genus Orthobunyavirus; Family Peribunyaviridae) and evidence that Estero Real Virus is a member of the Genus Orthonairovirusinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleArbovirus / classificaçãoGenoma / genéticaVírus Estero RealOrnithodoros / genéticaFilogenia / métodosSancti Spíritus (CU)info:eu-repo/semantics/openAccessreponame:Repositório Digital do Instituto Evandro Chagas (Patuá)instname:Instituto Evandro Chagas (IEC)instacron:IECORIGINALGenetic characterization of the Patois Serogroup (Genus Orthobunyavirus; Family Peribunyaviridae) and evidence that estero real virus is a member of the Genus Orthonairovirus.pdfGenetic characterization of the Patois Serogroup (Genus Orthobunyavirus; Family Peribunyaviridae) and evidence that estero real virus is a member of the Genus Orthonairovirus.pdfapplication/pdf985515https://patua.iec.gov.br/bitstreams/b85bf181-714f-4bca-8a8f-c777dca0c842/download450064b55a318ed11a55d786c7a6a35aMD51LICENSElicense.txtlicense.txttext/plain; charset=utf-82182https://patua.iec.gov.br/bitstreams/34410cd7-ef36-4b95-8785-8fb466fd1055/download11832eea31b16df8613079d742d61793MD52TEXTGenetic characterization of the Patois Serogroup (Genus Orthobunyavirus; Family Peribunyaviridae) and evidence that estero real virus is a member of the Genus Orthonairovirus.pdf.txtGenetic characterization of the Patois Serogroup (Genus Orthobunyavirus; Family Peribunyaviridae) and evidence that estero real virus is a member of the Genus Orthonairovirus.pdf.txtExtracted texttext/plain33807https://patua.iec.gov.br/bitstreams/ccb2e83b-e737-4cdd-befb-058350fcc016/downloadd986b0e4f56fd2d841315f028db60a8bMD55THUMBNAILGenetic characterization of the Patois Serogroup (Genus Orthobunyavirus; Family Peribunyaviridae) and evidence that estero real virus is a member of the Genus Orthonairovirus.pdf.jpgGenetic characterization of the Patois Serogroup (Genus Orthobunyavirus; Family Peribunyaviridae) and evidence that estero real virus is a member of the Genus Orthonairovirus.pdf.jpgGenerated Thumbnailimage/jpeg6546https://patua.iec.gov.br/bitstreams/cf2990f5-5c02-40bb-8cbe-a5a37b1e01cb/download39fdd40a8165e9c09ddf4bdb8825eb08MD56iec/38602022-10-20 21:55:24.569oai:patua.iec.gov.br:iec/3860https://patua.iec.gov.brRepositório InstitucionalPUBhttps://patua.iec.gov.br/oai/requestclariceneta@iec.gov.br || Biblioteca@iec.gov.bropendoar:2022-10-20T21:55:24Repositório Digital do Instituto Evandro Chagas (Patuá) - Instituto Evandro Chagas (IEC)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 |
dc.title.pt_BR.fl_str_mv |
Genetic characterization of the Patois Serogroup (Genus Orthobunyavirus; Family Peribunyaviridae) and evidence that Estero Real Virus is a member of the Genus Orthonairovirus |
title |
Genetic characterization of the Patois Serogroup (Genus Orthobunyavirus; Family Peribunyaviridae) and evidence that Estero Real Virus is a member of the Genus Orthonairovirus |
spellingShingle |
Genetic characterization of the Patois Serogroup (Genus Orthobunyavirus; Family Peribunyaviridae) and evidence that Estero Real Virus is a member of the Genus Orthonairovirus Aguilar, Patricia V Arbovirus / classificação Genoma / genética Vírus Estero Real Ornithodoros / genética Filogenia / métodos Sancti Spíritus (CU) |
title_short |
Genetic characterization of the Patois Serogroup (Genus Orthobunyavirus; Family Peribunyaviridae) and evidence that Estero Real Virus is a member of the Genus Orthonairovirus |
title_full |
Genetic characterization of the Patois Serogroup (Genus Orthobunyavirus; Family Peribunyaviridae) and evidence that Estero Real Virus is a member of the Genus Orthonairovirus |
title_fullStr |
Genetic characterization of the Patois Serogroup (Genus Orthobunyavirus; Family Peribunyaviridae) and evidence that Estero Real Virus is a member of the Genus Orthonairovirus |
title_full_unstemmed |
Genetic characterization of the Patois Serogroup (Genus Orthobunyavirus; Family Peribunyaviridae) and evidence that Estero Real Virus is a member of the Genus Orthonairovirus |
title_sort |
Genetic characterization of the Patois Serogroup (Genus Orthobunyavirus; Family Peribunyaviridae) and evidence that Estero Real Virus is a member of the Genus Orthonairovirus |
author |
Aguilar, Patricia V |
author_facet |
Aguilar, Patricia V Souza, William Marciel de Silvas, Jesus A Wood, Thomas Widen, Steven Fumagalli, Marcílio Jorge Nunes, Márcio Roberto Teixeira |
author_role |
author |
author2 |
Souza, William Marciel de Silvas, Jesus A Wood, Thomas Widen, Steven Fumagalli, Marcílio Jorge Nunes, Márcio Roberto Teixeira |
author2_role |
author author author author author author |
dc.contributor.author.fl_str_mv |
Aguilar, Patricia V Souza, William Marciel de Silvas, Jesus A Wood, Thomas Widen, Steven Fumagalli, Marcílio Jorge Nunes, Márcio Roberto Teixeira |
dc.subject.decsPrimary.pt_BR.fl_str_mv |
Arbovirus / classificação Genoma / genética Vírus Estero Real Ornithodoros / genética Filogenia / métodos Sancti Spíritus (CU) |
topic |
Arbovirus / classificação Genoma / genética Vírus Estero Real Ornithodoros / genética Filogenia / métodos Sancti Spíritus (CU) |
description |
Estero Real virus (ERV) was isolated in 1980 from Ornithodoros tadaridae ticks collected in El Estero Real, Sancti Spiritus, Cuba. Antigenic characterization of the isolate based on serological methods found a relationship with Abras and Zegla viruses and, consequently, the virus was classified taxonomically within the Patois serogroup. Given the fact that genetic characterization of Patois serogroup viruses has not yet been reported and that ERV is the only virus within the Patois serogroup isolated from ticks, we recently conducted nearly complete genome sequencing in an attempt to gain further insight into the genetic relationship of ERV with other Patois serogroup viruses and members of Peribunyaviridae family (Bunyavirales order). With the exception of ERV, our sequencing and phylogenetic studies revealed the close relationship of the Patois serogroup viruses to each other, forming a clear divergent clade from other members of the Orthobunyavirus genus (Peribunyaviridae family). Notably, our analysis also revealed that ERV forms a monophyletic clade that is closely related to species of the Orthonairovirus genus (Nairoviridae family) in all the genome segments. In light of these findings, we believe that the taxonomic classification of ERV should be revised. |
publishDate |
2018 |
dc.date.issued.fl_str_mv |
2018 |
dc.date.accessioned.fl_str_mv |
2019-08-28T12:59:19Z |
dc.date.available.fl_str_mv |
2019-08-28T12:59:19Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
AGUILAR, Patricia V. et al. Genetic characterization of the Patois Serogroup (Genus Orthobunyavirus; Family Peribunyaviridae) and evidence that Estero Real Virus is a member of the Genus Orthonairovirus. The American Journal of Tropical Medicine and Hygiene, v. 99, n. 2, p. 451-457, Aug. 2018. DOI: https://doi.org/10.4269/ajtmh.18-0201. Disponível em: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6090349/pdf/tpmd180201.pdf. |
dc.identifier.uri.fl_str_mv |
https://patua.iec.gov.br/handle/iec/3860 |
dc.identifier.issn.-.fl_str_mv |
0002-9637 |
dc.identifier.doi.pt_BR.fl_str_mv |
10.4269/ajtmh.18-0201 |
identifier_str_mv |
AGUILAR, Patricia V. et al. Genetic characterization of the Patois Serogroup (Genus Orthobunyavirus; Family Peribunyaviridae) and evidence that Estero Real Virus is a member of the Genus Orthonairovirus. The American Journal of Tropical Medicine and Hygiene, v. 99, n. 2, p. 451-457, Aug. 2018. DOI: https://doi.org/10.4269/ajtmh.18-0201. Disponível em: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6090349/pdf/tpmd180201.pdf. 0002-9637 10.4269/ajtmh.18-0201 |
url |
https://patua.iec.gov.br/handle/iec/3860 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.publisher.none.fl_str_mv |
American Society of Tropical Medicine and Hygiene |
publisher.none.fl_str_mv |
American Society of Tropical Medicine and Hygiene |
dc.source.none.fl_str_mv |
reponame:Repositório Digital do Instituto Evandro Chagas (Patuá) instname:Instituto Evandro Chagas (IEC) instacron:IEC |
instname_str |
Instituto Evandro Chagas (IEC) |
instacron_str |
IEC |
institution |
IEC |
reponame_str |
Repositório Digital do Instituto Evandro Chagas (Patuá) |
collection |
Repositório Digital do Instituto Evandro Chagas (Patuá) |
bitstream.url.fl_str_mv |
https://patua.iec.gov.br/bitstreams/b85bf181-714f-4bca-8a8f-c777dca0c842/download https://patua.iec.gov.br/bitstreams/34410cd7-ef36-4b95-8785-8fb466fd1055/download https://patua.iec.gov.br/bitstreams/ccb2e83b-e737-4cdd-befb-058350fcc016/download https://patua.iec.gov.br/bitstreams/cf2990f5-5c02-40bb-8cbe-a5a37b1e01cb/download |
bitstream.checksum.fl_str_mv |
450064b55a318ed11a55d786c7a6a35a 11832eea31b16df8613079d742d61793 d986b0e4f56fd2d841315f028db60a8b 39fdd40a8165e9c09ddf4bdb8825eb08 |
bitstream.checksumAlgorithm.fl_str_mv |
MD5 MD5 MD5 MD5 |
repository.name.fl_str_mv |
Repositório Digital do Instituto Evandro Chagas (Patuá) - Instituto Evandro Chagas (IEC) |
repository.mail.fl_str_mv |
clariceneta@iec.gov.br || Biblioteca@iec.gov.br |
_version_ |
1809190043713011712 |