Toxoplasma gondii SAG2, SAG3 and GRA6 alleles and single nucleotide polymorphism in congenital infections with known parasite load and clinical outcome

Detalhes bibliográficos
Autor(a) principal: Targa, Lília Spaleta
Data de Publicação: 2023
Outros Autores: Santos, Emilly Henrique dos, Yamamoto, Lidia, Barreira, Gabriel Acca, Rodrigues, Karen Alessandra, Rocha, Mussya Cisotto, Kanunfre, Kelly Aparecida, Okay, Thelma Suely
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Revista do Instituto de Medicina Tropical de São Paulo
Texto Completo: https://www.revistas.usp.br/rimtsp/article/view/207524
Resumo: Amniotic fluid DNA samples were genotyped by multilocus-nested-PCR-RFLP, but only three of 11 markers amplified 113 of 122 (92.6%) samples, resulting in 12 untyped and 101 partial non-archetypal genotypes. The 101 typed samples were subdivided into four groups: G1 with 73 samples (5’and 3’ SAG2 allele I + SAG3 allele III + GRA6 allele III), 53 had parasite load ≤ 102 parasites/mL (43 asymptomatic, 10 mild infections), 17 had load > 102 and ≤ 103 (one mild, 13 moderate and three severe), and three had load > 103 parasites/mL (three severe); G2 with 22 samples (5’and 3’ SAG2 allele I + SAG3 allele III), all parasite load levels ≤ 102 parasites/mL (18 asymptomatic and four mild); G3 with five samples (5’ and 3’ SAG2 allele I + SAG3 allele II), parasite load ≤ 102 parasites/mL (three asymptomatic and two mild); G4 with one sample (5’ and 3’ SAG2 allele II + SAG3 allele II + GRA6 allele I), a parasite load < 102 parasites/mL in an asymptomatic infant. After DNA sequencing, restriction sites confirmed SAG2, SAG3 and GRA6 alleles in 98.7%, 100% and 100% of the cases, respectively, while single nucleotide polymorphisms confirmed 90% of 5’-SAG2 allele I; 98.7% of 3’-SAG2 allele I; 98% of SAG-3 allele III, but only 40% of GRA6 allele III results. For the moment, partial non-archetypal genotypes of parasites did not show any relationship with either parasite load in amniotic fluid samples or clinical outcome of infants at the age of 12 months.
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spelling Toxoplasma gondii SAG2, SAG3 and GRA6 alleles and single nucleotide polymorphism in congenital infections with known parasite load and clinical outcomeToxoplasmosisCongenital toxoplasmosisGenotypingSingle nucleotide polymorphismParasite loadParasite burdenAmniotic fluid DNA samples were genotyped by multilocus-nested-PCR-RFLP, but only three of 11 markers amplified 113 of 122 (92.6%) samples, resulting in 12 untyped and 101 partial non-archetypal genotypes. The 101 typed samples were subdivided into four groups: G1 with 73 samples (5’and 3’ SAG2 allele I + SAG3 allele III + GRA6 allele III), 53 had parasite load ≤ 102 parasites/mL (43 asymptomatic, 10 mild infections), 17 had load > 102 and ≤ 103 (one mild, 13 moderate and three severe), and three had load > 103 parasites/mL (three severe); G2 with 22 samples (5’and 3’ SAG2 allele I + SAG3 allele III), all parasite load levels ≤ 102 parasites/mL (18 asymptomatic and four mild); G3 with five samples (5’ and 3’ SAG2 allele I + SAG3 allele II), parasite load ≤ 102 parasites/mL (three asymptomatic and two mild); G4 with one sample (5’ and 3’ SAG2 allele II + SAG3 allele II + GRA6 allele I), a parasite load < 102 parasites/mL in an asymptomatic infant. After DNA sequencing, restriction sites confirmed SAG2, SAG3 and GRA6 alleles in 98.7%, 100% and 100% of the cases, respectively, while single nucleotide polymorphisms confirmed 90% of 5’-SAG2 allele I; 98.7% of 3’-SAG2 allele I; 98% of SAG-3 allele III, but only 40% of GRA6 allele III results. For the moment, partial non-archetypal genotypes of parasites did not show any relationship with either parasite load in amniotic fluid samples or clinical outcome of infants at the age of 12 months.Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo2023-02-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://www.revistas.usp.br/rimtsp/article/view/20752410.1590/S1678-9946202365008 Revista do Instituto de Medicina Tropical de São Paulo; Vol. 65 (2023); e08Revista do Instituto de Medicina Tropical de São Paulo; v. 65 (2023); e08Revista do Instituto de Medicina Tropical de São Paulo; Vol. 65 (2023); e081678-99460036-4665reponame:Revista do Instituto de Medicina Tropical de São Pauloinstname:Instituto de Medicina Tropical (IMT)instacron:IMTenghttps://www.revistas.usp.br/rimtsp/article/view/207524/190881Copyright (c) 2023 Lília Spaleta Targa, Emilly Henrique dos Santos, Lidia Yamamoto, Gabriel Acca Barreira, Karen Alessandra Rodrigues, Mussya Cisotto Rocha, Kelly Aparecida Kanunfre, Thelma Suely Okayhttps://creativecommons.org/licenses/by-nc/4.0info:eu-repo/semantics/openAccessTarga, Lília Spaleta Santos, Emilly Henrique dos Yamamoto, Lidia Barreira, Gabriel Acca Rodrigues, Karen Alessandra Rocha, Mussya Cisotto Kanunfre, Kelly Aparecida Okay, Thelma Suely 2023-12-22T12:47:00Zoai:revistas.usp.br:article/207524Revistahttp://www.revistas.usp.br/rimtsp/indexPUBhttps://www.revistas.usp.br/rimtsp/oai||revimtsp@usp.br1678-99460036-4665opendoar:2023-12-22T12:47Revista do Instituto de Medicina Tropical de São Paulo - Instituto de Medicina Tropical (IMT)false
dc.title.none.fl_str_mv Toxoplasma gondii SAG2, SAG3 and GRA6 alleles and single nucleotide polymorphism in congenital infections with known parasite load and clinical outcome
title Toxoplasma gondii SAG2, SAG3 and GRA6 alleles and single nucleotide polymorphism in congenital infections with known parasite load and clinical outcome
spellingShingle Toxoplasma gondii SAG2, SAG3 and GRA6 alleles and single nucleotide polymorphism in congenital infections with known parasite load and clinical outcome
Targa, Lília Spaleta
Toxoplasmosis
Congenital toxoplasmosis
Genotyping
Single nucleotide polymorphism
Parasite load
Parasite burden
title_short Toxoplasma gondii SAG2, SAG3 and GRA6 alleles and single nucleotide polymorphism in congenital infections with known parasite load and clinical outcome
title_full Toxoplasma gondii SAG2, SAG3 and GRA6 alleles and single nucleotide polymorphism in congenital infections with known parasite load and clinical outcome
title_fullStr Toxoplasma gondii SAG2, SAG3 and GRA6 alleles and single nucleotide polymorphism in congenital infections with known parasite load and clinical outcome
title_full_unstemmed Toxoplasma gondii SAG2, SAG3 and GRA6 alleles and single nucleotide polymorphism in congenital infections with known parasite load and clinical outcome
title_sort Toxoplasma gondii SAG2, SAG3 and GRA6 alleles and single nucleotide polymorphism in congenital infections with known parasite load and clinical outcome
author Targa, Lília Spaleta
author_facet Targa, Lília Spaleta
Santos, Emilly Henrique dos
Yamamoto, Lidia
Barreira, Gabriel Acca
Rodrigues, Karen Alessandra
Rocha, Mussya Cisotto
Kanunfre, Kelly Aparecida
Okay, Thelma Suely
author_role author
author2 Santos, Emilly Henrique dos
Yamamoto, Lidia
Barreira, Gabriel Acca
Rodrigues, Karen Alessandra
Rocha, Mussya Cisotto
Kanunfre, Kelly Aparecida
Okay, Thelma Suely
author2_role author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Targa, Lília Spaleta
Santos, Emilly Henrique dos
Yamamoto, Lidia
Barreira, Gabriel Acca
Rodrigues, Karen Alessandra
Rocha, Mussya Cisotto
Kanunfre, Kelly Aparecida
Okay, Thelma Suely
dc.subject.por.fl_str_mv Toxoplasmosis
Congenital toxoplasmosis
Genotyping
Single nucleotide polymorphism
Parasite load
Parasite burden
topic Toxoplasmosis
Congenital toxoplasmosis
Genotyping
Single nucleotide polymorphism
Parasite load
Parasite burden
description Amniotic fluid DNA samples were genotyped by multilocus-nested-PCR-RFLP, but only three of 11 markers amplified 113 of 122 (92.6%) samples, resulting in 12 untyped and 101 partial non-archetypal genotypes. The 101 typed samples were subdivided into four groups: G1 with 73 samples (5’and 3’ SAG2 allele I + SAG3 allele III + GRA6 allele III), 53 had parasite load ≤ 102 parasites/mL (43 asymptomatic, 10 mild infections), 17 had load > 102 and ≤ 103 (one mild, 13 moderate and three severe), and three had load > 103 parasites/mL (three severe); G2 with 22 samples (5’and 3’ SAG2 allele I + SAG3 allele III), all parasite load levels ≤ 102 parasites/mL (18 asymptomatic and four mild); G3 with five samples (5’ and 3’ SAG2 allele I + SAG3 allele II), parasite load ≤ 102 parasites/mL (three asymptomatic and two mild); G4 with one sample (5’ and 3’ SAG2 allele II + SAG3 allele II + GRA6 allele I), a parasite load < 102 parasites/mL in an asymptomatic infant. After DNA sequencing, restriction sites confirmed SAG2, SAG3 and GRA6 alleles in 98.7%, 100% and 100% of the cases, respectively, while single nucleotide polymorphisms confirmed 90% of 5’-SAG2 allele I; 98.7% of 3’-SAG2 allele I; 98% of SAG-3 allele III, but only 40% of GRA6 allele III results. For the moment, partial non-archetypal genotypes of parasites did not show any relationship with either parasite load in amniotic fluid samples or clinical outcome of infants at the age of 12 months.
publishDate 2023
dc.date.none.fl_str_mv 2023-02-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://www.revistas.usp.br/rimtsp/article/view/207524
10.1590/S1678-9946202365008
url https://www.revistas.usp.br/rimtsp/article/view/207524
identifier_str_mv 10.1590/S1678-9946202365008
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://www.revistas.usp.br/rimtsp/article/view/207524/190881
dc.rights.driver.fl_str_mv https://creativecommons.org/licenses/by-nc/4.0
info:eu-repo/semantics/openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc/4.0
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo
publisher.none.fl_str_mv Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo
dc.source.none.fl_str_mv Revista do Instituto de Medicina Tropical de São Paulo; Vol. 65 (2023); e08
Revista do Instituto de Medicina Tropical de São Paulo; v. 65 (2023); e08
Revista do Instituto de Medicina Tropical de São Paulo; Vol. 65 (2023); e08
1678-9946
0036-4665
reponame:Revista do Instituto de Medicina Tropical de São Paulo
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instacron:IMT
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reponame_str Revista do Instituto de Medicina Tropical de São Paulo
collection Revista do Instituto de Medicina Tropical de São Paulo
repository.name.fl_str_mv Revista do Instituto de Medicina Tropical de São Paulo - Instituto de Medicina Tropical (IMT)
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