Colistin-resistant Escherichia coli belonging to different sequence types: genetic characterization of isolates responsible for colonization, community- and healthcareacquired infections
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Revista do Instituto de Medicina Tropical de São Paulo |
Texto Completo: | https://www.revistas.usp.br/rimtsp/article/view/186262 |
Resumo: | The plasmid-mediated colistin-resistance gene named mcr-1 has been recently described in different countries and it became a public health challenge. Of note, few studies have addressed the spread of Escherichia coli harboring the mcr-1 gene in both, community and hospital settings. A total of seven colistin-resistant E. coli carrying mcr-1, collected from 2016 to 2018, from community (n=4), healthcare-acquired infections (n=2) and colonization (n=1) were identified in three high complexity hospitals in Sao Paulo, Brazil. These colistin-resistant isolates were screened for mcr genes by PCR and all strains were submitted to Whole Genome Sequencing and the conjugation experiment. The seven strains belonged to seven distinct sequence types (ST744, ST131, ST69, ST48, ST354, ST57, ST10), and they differ regarding the resistance profiles. Transference of mcr-1 by conjugation to E. coli strain C600 was possible in five of the seven isolates. The mcr-1 gene was found in plasmid types IncX4 or IncI2. Three of the isolates have ESBL-encoding genes (blaCTX-M-2, n=2; blaCTX-M-8, n=1). We hereby report genetically distinct E. coli isolates, belonging to seven STs, harboring the mcr-1 gene, associated to community and healthcare-acquired infections, and colonization in patients from three hospitals in Sao Paulo. These findings point out for the potential spread of plasmid-mediated colistin-resistance mechanism in E. coli strains in Brazil. |
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Colistin-resistant Escherichia coli belonging to different sequence types: genetic characterization of isolates responsible for colonization, community- and healthcareacquired infectionsE. coliColistin-resistancemcr-1Community and healthcare-acquired infectionsThe plasmid-mediated colistin-resistance gene named mcr-1 has been recently described in different countries and it became a public health challenge. Of note, few studies have addressed the spread of Escherichia coli harboring the mcr-1 gene in both, community and hospital settings. A total of seven colistin-resistant E. coli carrying mcr-1, collected from 2016 to 2018, from community (n=4), healthcare-acquired infections (n=2) and colonization (n=1) were identified in three high complexity hospitals in Sao Paulo, Brazil. These colistin-resistant isolates were screened for mcr genes by PCR and all strains were submitted to Whole Genome Sequencing and the conjugation experiment. The seven strains belonged to seven distinct sequence types (ST744, ST131, ST69, ST48, ST354, ST57, ST10), and they differ regarding the resistance profiles. Transference of mcr-1 by conjugation to E. coli strain C600 was possible in five of the seven isolates. The mcr-1 gene was found in plasmid types IncX4 or IncI2. Three of the isolates have ESBL-encoding genes (blaCTX-M-2, n=2; blaCTX-M-8, n=1). We hereby report genetically distinct E. coli isolates, belonging to seven STs, harboring the mcr-1 gene, associated to community and healthcare-acquired infections, and colonization in patients from three hospitals in Sao Paulo. These findings point out for the potential spread of plasmid-mediated colistin-resistance mechanism in E. coli strains in Brazil.Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo2021-04-23info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://www.revistas.usp.br/rimtsp/article/view/186262Revista do Instituto de Medicina Tropical de São Paulo; Vol. 63 (2021); e38Revista do Instituto de Medicina Tropical de São Paulo; Vol. 63 (2021); e38Revista do Instituto de Medicina Tropical de São Paulo; v. 63 (2021); e381678-99460036-4665reponame:Revista do Instituto de Medicina Tropical de São Pauloinstname:Instituto de Medicina Tropical (IMT)instacron:IMTenghttps://www.revistas.usp.br/rimtsp/article/view/186262/171964Copyright (c) 2021 Yrving Paiva, Debora Satie Nagano, Andre Luis Franco Cotia, Thais Guimarães , Roberta Cristina Ruedas Martins, Lauro Vieira Perdigão Neto, Marina Farrel Côrtes, Ana Paula Marchi , Louise Corscadden, Anna Silva Machado, Alexandre Inácio de Paula, Lucas Augusto Moyses Franco , Patricia Regina Neves, Anna Sara Levin , Silvia Figueiredo Costa https://creativecommons.org/licenses/by-nc/4.0info:eu-repo/semantics/openAccessPaiva, Yrving Nagano, Debora Satie Cotia, Andre Luis Franco Guimarães , ThaisMartins, Roberta Cristina Ruedas Perdigão Neto, Lauro Vieira Côrtes, Marina Farrel Marchi , Ana Paula Corscadden, Louise Machado, Anna Silva Paula, Alexandre Inácio de Franco , Lucas Augusto MoysesNeves, Patricia Regina Levin , Anna Sara Costa , Silvia Figueiredo 2022-05-16T13:44:35Zoai:revistas.usp.br:article/186262Revistahttp://www.revistas.usp.br/rimtsp/indexPUBhttps://www.revistas.usp.br/rimtsp/oai||revimtsp@usp.br1678-99460036-4665opendoar:2022-12-13T16:52:58.047281Revista do Instituto de Medicina Tropical de São Paulo - Instituto de Medicina Tropical (IMT)true |
dc.title.none.fl_str_mv |
Colistin-resistant Escherichia coli belonging to different sequence types: genetic characterization of isolates responsible for colonization, community- and healthcareacquired infections |
title |
Colistin-resistant Escherichia coli belonging to different sequence types: genetic characterization of isolates responsible for colonization, community- and healthcareacquired infections |
spellingShingle |
Colistin-resistant Escherichia coli belonging to different sequence types: genetic characterization of isolates responsible for colonization, community- and healthcareacquired infections Paiva, Yrving E. coli Colistin-resistance mcr-1 Community and healthcare-acquired infections |
title_short |
Colistin-resistant Escherichia coli belonging to different sequence types: genetic characterization of isolates responsible for colonization, community- and healthcareacquired infections |
title_full |
Colistin-resistant Escherichia coli belonging to different sequence types: genetic characterization of isolates responsible for colonization, community- and healthcareacquired infections |
title_fullStr |
Colistin-resistant Escherichia coli belonging to different sequence types: genetic characterization of isolates responsible for colonization, community- and healthcareacquired infections |
title_full_unstemmed |
Colistin-resistant Escherichia coli belonging to different sequence types: genetic characterization of isolates responsible for colonization, community- and healthcareacquired infections |
title_sort |
Colistin-resistant Escherichia coli belonging to different sequence types: genetic characterization of isolates responsible for colonization, community- and healthcareacquired infections |
author |
Paiva, Yrving |
author_facet |
Paiva, Yrving Nagano, Debora Satie Cotia, Andre Luis Franco Guimarães , Thais Martins, Roberta Cristina Ruedas Perdigão Neto, Lauro Vieira Côrtes, Marina Farrel Marchi , Ana Paula Corscadden, Louise Machado, Anna Silva Paula, Alexandre Inácio de Franco , Lucas Augusto Moyses Neves, Patricia Regina Levin , Anna Sara Costa , Silvia Figueiredo |
author_role |
author |
author2 |
Nagano, Debora Satie Cotia, Andre Luis Franco Guimarães , Thais Martins, Roberta Cristina Ruedas Perdigão Neto, Lauro Vieira Côrtes, Marina Farrel Marchi , Ana Paula Corscadden, Louise Machado, Anna Silva Paula, Alexandre Inácio de Franco , Lucas Augusto Moyses Neves, Patricia Regina Levin , Anna Sara Costa , Silvia Figueiredo |
author2_role |
author author author author author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Paiva, Yrving Nagano, Debora Satie Cotia, Andre Luis Franco Guimarães , Thais Martins, Roberta Cristina Ruedas Perdigão Neto, Lauro Vieira Côrtes, Marina Farrel Marchi , Ana Paula Corscadden, Louise Machado, Anna Silva Paula, Alexandre Inácio de Franco , Lucas Augusto Moyses Neves, Patricia Regina Levin , Anna Sara Costa , Silvia Figueiredo |
dc.subject.por.fl_str_mv |
E. coli Colistin-resistance mcr-1 Community and healthcare-acquired infections |
topic |
E. coli Colistin-resistance mcr-1 Community and healthcare-acquired infections |
description |
The plasmid-mediated colistin-resistance gene named mcr-1 has been recently described in different countries and it became a public health challenge. Of note, few studies have addressed the spread of Escherichia coli harboring the mcr-1 gene in both, community and hospital settings. A total of seven colistin-resistant E. coli carrying mcr-1, collected from 2016 to 2018, from community (n=4), healthcare-acquired infections (n=2) and colonization (n=1) were identified in three high complexity hospitals in Sao Paulo, Brazil. These colistin-resistant isolates were screened for mcr genes by PCR and all strains were submitted to Whole Genome Sequencing and the conjugation experiment. The seven strains belonged to seven distinct sequence types (ST744, ST131, ST69, ST48, ST354, ST57, ST10), and they differ regarding the resistance profiles. Transference of mcr-1 by conjugation to E. coli strain C600 was possible in five of the seven isolates. The mcr-1 gene was found in plasmid types IncX4 or IncI2. Three of the isolates have ESBL-encoding genes (blaCTX-M-2, n=2; blaCTX-M-8, n=1). We hereby report genetically distinct E. coli isolates, belonging to seven STs, harboring the mcr-1 gene, associated to community and healthcare-acquired infections, and colonization in patients from three hospitals in Sao Paulo. These findings point out for the potential spread of plasmid-mediated colistin-resistance mechanism in E. coli strains in Brazil. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-04-23 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://www.revistas.usp.br/rimtsp/article/view/186262 |
url |
https://www.revistas.usp.br/rimtsp/article/view/186262 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
https://www.revistas.usp.br/rimtsp/article/view/186262/171964 |
dc.rights.driver.fl_str_mv |
https://creativecommons.org/licenses/by-nc/4.0 info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
https://creativecommons.org/licenses/by-nc/4.0 |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo |
publisher.none.fl_str_mv |
Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo |
dc.source.none.fl_str_mv |
Revista do Instituto de Medicina Tropical de São Paulo; Vol. 63 (2021); e38 Revista do Instituto de Medicina Tropical de São Paulo; Vol. 63 (2021); e38 Revista do Instituto de Medicina Tropical de São Paulo; v. 63 (2021); e38 1678-9946 0036-4665 reponame:Revista do Instituto de Medicina Tropical de São Paulo instname:Instituto de Medicina Tropical (IMT) instacron:IMT |
instname_str |
Instituto de Medicina Tropical (IMT) |
instacron_str |
IMT |
institution |
IMT |
reponame_str |
Revista do Instituto de Medicina Tropical de São Paulo |
collection |
Revista do Instituto de Medicina Tropical de São Paulo |
repository.name.fl_str_mv |
Revista do Instituto de Medicina Tropical de São Paulo - Instituto de Medicina Tropical (IMT) |
repository.mail.fl_str_mv |
||revimtsp@usp.br |
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1798951653182799872 |