Colistin-resistant Escherichia coli belonging to different sequence types: genetic characterization of isolates responsible for colonization, community- and healthcareacquired infections

Detalhes bibliográficos
Autor(a) principal: Paiva, Yrving
Data de Publicação: 2021
Outros Autores: Nagano, Debora Satie, Cotia, Andre Luis Franco, Guimarães , Thais, Martins, Roberta Cristina Ruedas, Perdigão Neto, Lauro Vieira, Côrtes, Marina Farrel, Marchi , Ana Paula, Corscadden, Louise, Machado, Anna Silva, Paula, Alexandre Inácio de, Franco , Lucas Augusto Moyses, Neves, Patricia Regina, Levin , Anna Sara, Costa , Silvia Figueiredo
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Revista do Instituto de Medicina Tropical de São Paulo
Texto Completo: https://www.revistas.usp.br/rimtsp/article/view/186262
Resumo: The plasmid-mediated colistin-resistance gene named mcr-1 has been recently described in different countries and it became a public health challenge. Of note, few studies have addressed the spread of Escherichia coli harboring the mcr-1 gene in both, community and hospital settings. A total of seven colistin-resistant E. coli carrying mcr-1, collected from 2016 to 2018, from community (n=4), healthcare-acquired infections (n=2) and colonization (n=1) were identified in three high complexity hospitals in Sao Paulo, Brazil. These colistin-resistant isolates were screened for mcr genes by PCR and all strains were submitted to Whole Genome Sequencing and the conjugation experiment. The seven strains belonged to seven distinct sequence types (ST744, ST131, ST69, ST48, ST354, ST57, ST10), and they differ regarding the resistance profiles. Transference of mcr-1 by conjugation to E. coli strain C600 was possible in five of the seven isolates. The mcr-1 gene was found in plasmid types IncX4 or IncI2. Three of the isolates have ESBL-encoding genes (blaCTX-M-2, n=2; blaCTX-M-8, n=1). We hereby report genetically distinct E. coli isolates, belonging to seven STs, harboring the mcr-1 gene, associated to community and healthcare-acquired infections, and colonization in patients from three hospitals in Sao Paulo. These findings point out for the potential spread of plasmid-mediated colistin-resistance mechanism in E. coli strains in Brazil.
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spelling Colistin-resistant Escherichia coli belonging to different sequence types: genetic characterization of isolates responsible for colonization, community- and healthcareacquired infectionsE. coliColistin-resistancemcr-1Community and healthcare-acquired infectionsThe plasmid-mediated colistin-resistance gene named mcr-1 has been recently described in different countries and it became a public health challenge. Of note, few studies have addressed the spread of Escherichia coli harboring the mcr-1 gene in both, community and hospital settings. A total of seven colistin-resistant E. coli carrying mcr-1, collected from 2016 to 2018, from community (n=4), healthcare-acquired infections (n=2) and colonization (n=1) were identified in three high complexity hospitals in Sao Paulo, Brazil. These colistin-resistant isolates were screened for mcr genes by PCR and all strains were submitted to Whole Genome Sequencing and the conjugation experiment. The seven strains belonged to seven distinct sequence types (ST744, ST131, ST69, ST48, ST354, ST57, ST10), and they differ regarding the resistance profiles. Transference of mcr-1 by conjugation to E. coli strain C600 was possible in five of the seven isolates. The mcr-1 gene was found in plasmid types IncX4 or IncI2. Three of the isolates have ESBL-encoding genes (blaCTX-M-2, n=2; blaCTX-M-8, n=1). We hereby report genetically distinct E. coli isolates, belonging to seven STs, harboring the mcr-1 gene, associated to community and healthcare-acquired infections, and colonization in patients from three hospitals in Sao Paulo. These findings point out for the potential spread of plasmid-mediated colistin-resistance mechanism in E. coli strains in Brazil.Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo2021-04-23info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://www.revistas.usp.br/rimtsp/article/view/186262Revista do Instituto de Medicina Tropical de São Paulo; Vol. 63 (2021); e38Revista do Instituto de Medicina Tropical de São Paulo; Vol. 63 (2021); e38Revista do Instituto de Medicina Tropical de São Paulo; v. 63 (2021); e381678-99460036-4665reponame:Revista do Instituto de Medicina Tropical de São Pauloinstname:Instituto de Medicina Tropical (IMT)instacron:IMTenghttps://www.revistas.usp.br/rimtsp/article/view/186262/171964Copyright (c) 2021 Yrving Paiva, Debora Satie Nagano, Andre Luis Franco Cotia, Thais Guimarães , Roberta Cristina Ruedas Martins, Lauro Vieira Perdigão Neto, Marina Farrel Côrtes, Ana Paula Marchi , Louise Corscadden, Anna Silva Machado, Alexandre Inácio de Paula, Lucas Augusto Moyses Franco , Patricia Regina Neves, Anna Sara Levin , Silvia Figueiredo Costa https://creativecommons.org/licenses/by-nc/4.0info:eu-repo/semantics/openAccessPaiva, Yrving Nagano, Debora Satie Cotia, Andre Luis Franco Guimarães , ThaisMartins, Roberta Cristina Ruedas Perdigão Neto, Lauro Vieira Côrtes, Marina Farrel Marchi , Ana Paula Corscadden, Louise Machado, Anna Silva Paula, Alexandre Inácio de Franco , Lucas Augusto MoysesNeves, Patricia Regina Levin , Anna Sara Costa , Silvia Figueiredo 2022-05-16T13:44:35Zoai:revistas.usp.br:article/186262Revistahttp://www.revistas.usp.br/rimtsp/indexPUBhttps://www.revistas.usp.br/rimtsp/oai||revimtsp@usp.br1678-99460036-4665opendoar:2022-12-13T16:52:58.047281Revista do Instituto de Medicina Tropical de São Paulo - Instituto de Medicina Tropical (IMT)true
dc.title.none.fl_str_mv Colistin-resistant Escherichia coli belonging to different sequence types: genetic characterization of isolates responsible for colonization, community- and healthcareacquired infections
title Colistin-resistant Escherichia coli belonging to different sequence types: genetic characterization of isolates responsible for colonization, community- and healthcareacquired infections
spellingShingle Colistin-resistant Escherichia coli belonging to different sequence types: genetic characterization of isolates responsible for colonization, community- and healthcareacquired infections
Paiva, Yrving
E. coli
Colistin-resistance
mcr-1
Community and healthcare-acquired infections
title_short Colistin-resistant Escherichia coli belonging to different sequence types: genetic characterization of isolates responsible for colonization, community- and healthcareacquired infections
title_full Colistin-resistant Escherichia coli belonging to different sequence types: genetic characterization of isolates responsible for colonization, community- and healthcareacquired infections
title_fullStr Colistin-resistant Escherichia coli belonging to different sequence types: genetic characterization of isolates responsible for colonization, community- and healthcareacquired infections
title_full_unstemmed Colistin-resistant Escherichia coli belonging to different sequence types: genetic characterization of isolates responsible for colonization, community- and healthcareacquired infections
title_sort Colistin-resistant Escherichia coli belonging to different sequence types: genetic characterization of isolates responsible for colonization, community- and healthcareacquired infections
author Paiva, Yrving
author_facet Paiva, Yrving
Nagano, Debora Satie
Cotia, Andre Luis Franco
Guimarães , Thais
Martins, Roberta Cristina Ruedas
Perdigão Neto, Lauro Vieira
Côrtes, Marina Farrel
Marchi , Ana Paula
Corscadden, Louise
Machado, Anna Silva
Paula, Alexandre Inácio de
Franco , Lucas Augusto Moyses
Neves, Patricia Regina
Levin , Anna Sara
Costa , Silvia Figueiredo
author_role author
author2 Nagano, Debora Satie
Cotia, Andre Luis Franco
Guimarães , Thais
Martins, Roberta Cristina Ruedas
Perdigão Neto, Lauro Vieira
Côrtes, Marina Farrel
Marchi , Ana Paula
Corscadden, Louise
Machado, Anna Silva
Paula, Alexandre Inácio de
Franco , Lucas Augusto Moyses
Neves, Patricia Regina
Levin , Anna Sara
Costa , Silvia Figueiredo
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Paiva, Yrving
Nagano, Debora Satie
Cotia, Andre Luis Franco
Guimarães , Thais
Martins, Roberta Cristina Ruedas
Perdigão Neto, Lauro Vieira
Côrtes, Marina Farrel
Marchi , Ana Paula
Corscadden, Louise
Machado, Anna Silva
Paula, Alexandre Inácio de
Franco , Lucas Augusto Moyses
Neves, Patricia Regina
Levin , Anna Sara
Costa , Silvia Figueiredo
dc.subject.por.fl_str_mv E. coli
Colistin-resistance
mcr-1
Community and healthcare-acquired infections
topic E. coli
Colistin-resistance
mcr-1
Community and healthcare-acquired infections
description The plasmid-mediated colistin-resistance gene named mcr-1 has been recently described in different countries and it became a public health challenge. Of note, few studies have addressed the spread of Escherichia coli harboring the mcr-1 gene in both, community and hospital settings. A total of seven colistin-resistant E. coli carrying mcr-1, collected from 2016 to 2018, from community (n=4), healthcare-acquired infections (n=2) and colonization (n=1) were identified in three high complexity hospitals in Sao Paulo, Brazil. These colistin-resistant isolates were screened for mcr genes by PCR and all strains were submitted to Whole Genome Sequencing and the conjugation experiment. The seven strains belonged to seven distinct sequence types (ST744, ST131, ST69, ST48, ST354, ST57, ST10), and they differ regarding the resistance profiles. Transference of mcr-1 by conjugation to E. coli strain C600 was possible in five of the seven isolates. The mcr-1 gene was found in plasmid types IncX4 or IncI2. Three of the isolates have ESBL-encoding genes (blaCTX-M-2, n=2; blaCTX-M-8, n=1). We hereby report genetically distinct E. coli isolates, belonging to seven STs, harboring the mcr-1 gene, associated to community and healthcare-acquired infections, and colonization in patients from three hospitals in Sao Paulo. These findings point out for the potential spread of plasmid-mediated colistin-resistance mechanism in E. coli strains in Brazil.
publishDate 2021
dc.date.none.fl_str_mv 2021-04-23
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://www.revistas.usp.br/rimtsp/article/view/186262
url https://www.revistas.usp.br/rimtsp/article/view/186262
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://www.revistas.usp.br/rimtsp/article/view/186262/171964
dc.rights.driver.fl_str_mv https://creativecommons.org/licenses/by-nc/4.0
info:eu-repo/semantics/openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc/4.0
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo
publisher.none.fl_str_mv Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo
dc.source.none.fl_str_mv Revista do Instituto de Medicina Tropical de São Paulo; Vol. 63 (2021); e38
Revista do Instituto de Medicina Tropical de São Paulo; Vol. 63 (2021); e38
Revista do Instituto de Medicina Tropical de São Paulo; v. 63 (2021); e38
1678-9946
0036-4665
reponame:Revista do Instituto de Medicina Tropical de São Paulo
instname:Instituto de Medicina Tropical (IMT)
instacron:IMT
instname_str Instituto de Medicina Tropical (IMT)
instacron_str IMT
institution IMT
reponame_str Revista do Instituto de Medicina Tropical de São Paulo
collection Revista do Instituto de Medicina Tropical de São Paulo
repository.name.fl_str_mv Revista do Instituto de Medicina Tropical de São Paulo - Instituto de Medicina Tropical (IMT)
repository.mail.fl_str_mv ||revimtsp@usp.br
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