Bacterial communities of the marine sponges Hymeniacidon heliophila and Polymastia janeirensis and their environment in Rio de Janeiro, Brazil
Autor(a) principal: | |
---|---|
Data de Publicação: | 2008 |
Outros Autores: | , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional do INMETRO |
Texto Completo: | http://hdl.handle.net/10926/1682 |
Resumo: | In this study we performed a survey of the bacterial communities associated with the Western Atlantic demosponges Hymeniacidon heliophila and Polymastia janeirensis, based on 16S rRNA sequencing and transmission electron microscopy (TEM). We compared diversity and composition of the sponge-associated bacteria to those of environmental bacteria, represented by free-living bacterioplankton and by bacteria attached to organic particulate matter in superWcial sediments. Partial bacterial 16S rRNA sequences from seawater, sediment, and sponges were retrieved by PCR, cloning, and sequencing. Sequences were subjected to rarefaction analyses, phylogenetic tree construction, and LIBSHUFF quantitative statistics to verify coverage and similarity between libraries. Community structure of the free-living bacterioplankton was phylogenetically different from that of the sponge-associated bacterial assemblages. On the other hand, some sediment-attached bacteria were also found in the sponge bacterial community, indicating that sponges may incorporate bacteria together with sediment particles. Rare and few prokaryotic morphotypes were found in TEM analyses of sponge mesohyl matrix of both species. Molecular data indicate that bacterial richness and diversity decreases from bacterioplankton, to particulate organic sediment, and to H. heliophila and P. janeirensis. Sponges from Rio de Janeiro harbor a pool of novel and exclusive sponge-associated bacterial taxa. Sponge-associated bacterial communities are composed of both taxons shared by many sponge groups and by species-speciWc bacteria. |
id |
INMT_690809686d813c6267019ecb6b97b03a |
---|---|
oai_identifier_str |
oai:xrepo01s.inmetro.gov.br:10926/1682 |
network_acronym_str |
INMT |
network_name_str |
Repositório Institucional do INMETRO |
repository_id_str |
|
spelling |
info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleBacterial communities of the marine sponges Hymeniacidon heliophila and Polymastia janeirensis and their environment in Rio de Janeiro, Brazil20082012-06-20T13:23:34Z2012-06-20T13:23:34ZIn this study we performed a survey of the bacterial communities associated with the Western Atlantic demosponges Hymeniacidon heliophila and Polymastia janeirensis, based on 16S rRNA sequencing and transmission electron microscopy (TEM). We compared diversity and composition of the sponge-associated bacteria to those of environmental bacteria, represented by free-living bacterioplankton and by bacteria attached to organic particulate matter in superWcial sediments. Partial bacterial 16S rRNA sequences from seawater, sediment, and sponges were retrieved by PCR, cloning, and sequencing. Sequences were subjected to rarefaction analyses, phylogenetic tree construction, and LIBSHUFF quantitative statistics to verify coverage and similarity between libraries. Community structure of the free-living bacterioplankton was phylogenetically different from that of the sponge-associated bacterial assemblages. On the other hand, some sediment-attached bacteria were also found in the sponge bacterial community, indicating that sponges may incorporate bacteria together with sediment particles. Rare and few prokaryotic morphotypes were found in TEM analyses of sponge mesohyl matrix of both species. Molecular data indicate that bacterial richness and diversity decreases from bacterioplankton, to particulate organic sediment, and to H. heliophila and P. janeirensis. Sponges from Rio de Janeiro harbor a pool of novel and exclusive sponge-associated bacterial taxa. Sponge-associated bacterial communities are composed of both taxons shared by many sponge groups and by species-speciWc bacteria.12 p. : il.Submitted by Lívia Oliveira (livia.oliveira2@hotmail.com) on 2012-06-05T14:34:03Z No. of bitstreams: 1 Alexander Cardoso.Marine Biol.2008 - F I .pdf: 706799 bytes, checksum: 8b44a83992e86a03fa5878dde43252a2 (MD5)Approved for entry into archive by Regina Mello(mrmello@inmetro.gov.br) on 2012-06-20T13:16:23Z (GMT) No. of bitstreams: 1 Alexander Cardoso.Marine Biol.2008 - F I .pdf: 706799 bytes, checksum: 8b44a83992e86a03fa5878dde43252a2 (MD5)Made available in DSpace on 2012-06-20T13:23:34Z (GMT). No. of bitstreams: 1 Alexander Cardoso.Marine Biol.2008 - F I .pdf: 706799 bytes, checksum: 8b44a83992e86a03fa5878dde43252a2 (MD5) Previous issue date: 2008enghttp://hdl.handle.net/10926/1682DMD_hdl_10926/1682TURQUE, Aline S. et al. Bacterial communities of the marine sponges Hymeniacidon heliophila and Polymastia janeirensis and their environment in Rio de Janeiro, Brazil. Marine Biology, v. 155, p. 135–146, 2008.Turque, Aline da SilvaCardoso, Alexander MachadoSilveira, Cynthia Barbosa daVieira, Ricardo PilzFreitas, Flávia Alvim Dutra deAlbano, Rodolpho MattosGonzalez, Alessandra Silva MorillaParanhos, Rodolfo Pinheiro da RochaMuricy, Guilherme Ramos da SilvaMartins, Orlando Bonifácioinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional do INMETROinstname:Instituto Nacional de Metrologia, Qualidade e Tecnologia (INMETRO)instacron:INMETROTurque_2008.pdfhttp://xrepo01s.inmetro.gov.br/bitstream/10926/1682/1/Turque_2008.pdfapplication/pdf706799http://xrepo01s.inmetro.gov.br/bitstream/10926/1682/1/Turque_2008.pdf8b44a83992e86a03fa5878dde43252a2MD510926_1682_1Turque_2008.pdf.txthttp://xrepo01s.inmetro.gov.br/bitstream/10926/1682/6/Turque_2008.pdf.txttext/plain53032http://xrepo01s.inmetro.gov.br/bitstream/10926/1682/6/Turque_2008.pdf.txtb940f3f3cc76623044b17f49f8020ef2MD510926_1682_62024-06-10T15:24:51Zoai:xrepo01s.inmetro.gov.br:10926/1682Repositório de Publicaçõeshttp://repositorios.inmetro.gov.br/oai/requestopendoar:2012-10-26T17:03:15Repositório Institucional do INMETRO - Instituto Nacional de Metrologia, Qualidade e Tecnologia (INMETRO)false |
dc.title.none.fl_str_mv |
Bacterial communities of the marine sponges Hymeniacidon heliophila and Polymastia janeirensis and their environment in Rio de Janeiro, Brazil |
title |
Bacterial communities of the marine sponges Hymeniacidon heliophila and Polymastia janeirensis and their environment in Rio de Janeiro, Brazil |
spellingShingle |
Bacterial communities of the marine sponges Hymeniacidon heliophila and Polymastia janeirensis and their environment in Rio de Janeiro, Brazil Turque, Aline da Silva |
title_short |
Bacterial communities of the marine sponges Hymeniacidon heliophila and Polymastia janeirensis and their environment in Rio de Janeiro, Brazil |
title_full |
Bacterial communities of the marine sponges Hymeniacidon heliophila and Polymastia janeirensis and their environment in Rio de Janeiro, Brazil |
title_fullStr |
Bacterial communities of the marine sponges Hymeniacidon heliophila and Polymastia janeirensis and their environment in Rio de Janeiro, Brazil |
title_full_unstemmed |
Bacterial communities of the marine sponges Hymeniacidon heliophila and Polymastia janeirensis and their environment in Rio de Janeiro, Brazil |
title_sort |
Bacterial communities of the marine sponges Hymeniacidon heliophila and Polymastia janeirensis and their environment in Rio de Janeiro, Brazil |
author |
Turque, Aline da Silva |
author_facet |
Turque, Aline da Silva Cardoso, Alexander Machado Silveira, Cynthia Barbosa da Vieira, Ricardo Pilz Freitas, Flávia Alvim Dutra de Albano, Rodolpho Mattos Gonzalez, Alessandra Silva Morilla Paranhos, Rodolfo Pinheiro da Rocha Muricy, Guilherme Ramos da Silva Martins, Orlando Bonifácio |
author_role |
author |
author2 |
Cardoso, Alexander Machado Silveira, Cynthia Barbosa da Vieira, Ricardo Pilz Freitas, Flávia Alvim Dutra de Albano, Rodolpho Mattos Gonzalez, Alessandra Silva Morilla Paranhos, Rodolfo Pinheiro da Rocha Muricy, Guilherme Ramos da Silva Martins, Orlando Bonifácio |
author2_role |
author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Turque, Aline da Silva Cardoso, Alexander Machado Silveira, Cynthia Barbosa da Vieira, Ricardo Pilz Freitas, Flávia Alvim Dutra de Albano, Rodolpho Mattos Gonzalez, Alessandra Silva Morilla Paranhos, Rodolfo Pinheiro da Rocha Muricy, Guilherme Ramos da Silva Martins, Orlando Bonifácio |
description |
In this study we performed a survey of the bacterial communities associated with the Western Atlantic demosponges Hymeniacidon heliophila and Polymastia janeirensis, based on 16S rRNA sequencing and transmission electron microscopy (TEM). We compared diversity and composition of the sponge-associated bacteria to those of environmental bacteria, represented by free-living bacterioplankton and by bacteria attached to organic particulate matter in superWcial sediments. Partial bacterial 16S rRNA sequences from seawater, sediment, and sponges were retrieved by PCR, cloning, and sequencing. Sequences were subjected to rarefaction analyses, phylogenetic tree construction, and LIBSHUFF quantitative statistics to verify coverage and similarity between libraries. Community structure of the free-living bacterioplankton was phylogenetically different from that of the sponge-associated bacterial assemblages. On the other hand, some sediment-attached bacteria were also found in the sponge bacterial community, indicating that sponges may incorporate bacteria together with sediment particles. Rare and few prokaryotic morphotypes were found in TEM analyses of sponge mesohyl matrix of both species. Molecular data indicate that bacterial richness and diversity decreases from bacterioplankton, to particulate organic sediment, and to H. heliophila and P. janeirensis. Sponges from Rio de Janeiro harbor a pool of novel and exclusive sponge-associated bacterial taxa. Sponge-associated bacterial communities are composed of both taxons shared by many sponge groups and by species-speciWc bacteria. |
publishDate |
2008 |
dc.date.issued.fl_str_mv |
2008 |
dc.date.available.fl_str_mv |
2012-06-20T13:23:34Z |
dc.date.accessioned.fl_str_mv |
2012-06-20T13:23:34Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10926/1682 DMD_hdl_10926/1682 |
dc.identifier.citation.fl_str_mv |
TURQUE, Aline S. et al. Bacterial communities of the marine sponges Hymeniacidon heliophila and Polymastia janeirensis and their environment in Rio de Janeiro, Brazil. Marine Biology, v. 155, p. 135–146, 2008. |
url |
http://hdl.handle.net/10926/1682 |
identifier_str_mv |
DMD_hdl_10926/1682 TURQUE, Aline S. et al. Bacterial communities of the marine sponges Hymeniacidon heliophila and Polymastia janeirensis and their environment in Rio de Janeiro, Brazil. Marine Biology, v. 155, p. 135–146, 2008. |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.bitstream.fl_str_mv |
application/pdf text/plain |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional do INMETRO instname:Instituto Nacional de Metrologia, Qualidade e Tecnologia (INMETRO) instacron:INMETRO |
instname_str |
Instituto Nacional de Metrologia, Qualidade e Tecnologia (INMETRO) |
instacron_str |
INMETRO |
institution |
INMETRO |
reponame_str |
Repositório Institucional do INMETRO |
collection |
Repositório Institucional do INMETRO |
repository.name.fl_str_mv |
Repositório Institucional do INMETRO - Instituto Nacional de Metrologia, Qualidade e Tecnologia (INMETRO) |
repository.mail.fl_str_mv |
|
_version_ |
1801499966072422400 |