Microsatellite data suggest significant population structure and differentiation within the malaria vector Anopheles darlingi in Central and South America

Detalhes bibliográficos
Autor(a) principal: Mirabello, Lisa
Data de Publicação: 2008
Outros Autores: Vineis, Joseph H., Yanoviak, Stephen P., Scarpassa, Vera Margarete, Pôvoa, Marinete Marins, Padilla, Norma R., Acheé, Nicole L., Conn, Jan E.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional do INPA
Texto Completo: https://repositorio.inpa.gov.br/handle/1/16332
Resumo: Background. Anopheles darlingi is the most important malaria vector in the Neotropics. An understanding of A. darlingi's population structure and contemporary gene flow patterns is necessary if vector populations are to be successfully controlled. We assessed population genetic structure and levels of differentiation based on 1,376 samples from 31 localities throughout the Peruvian and Brazilian Amazon and Central America using 5-8 microsatellite loci. Results. We found high levels of polymorphism for all of the Amazonian populations (mean RS = 7.62, mean HO = 0.742), and low levels for the Belize and Guatemalan populations (mean RS = 4.3, mean HO = 0.457). The Bayesian clustering analysis revealed five population clusters: northeastern Amazonian Brazil, southeastern and central Amazonian Brazil, western and central Amazonian Brazil, Peruvian Amazon, and the Central American populations. Within Central America there was low non-significant differentiation, except for between the populations separated by the Maya Mountains. Within Amazonia there was a moderate level of significant differentiation attributed to isolation by distance. Within Peru there was no significant population structure and low differentiation, and some evidence of a population expansion. The pairwise estimates of genetic differentiation between Central America and Amazonian populations were all very high and highly significant (FST = 0.1859 - 0.3901, P < 0.05). Both the DA and FST distance-based trees illustrated the main division to be between Central America and Amazonia. Conclusion. We detected a large amount of population structure in Amazonia, with three population clusters within Brazil and one including the Peru populations. The considerable differences in Ne among the populations may have contributed to the observed genetic differentiation. All of the data suggest that the primary division within A. darlingi corresponds to two white gene genotypes between Amazonia (genotype 1) and Central America, parts of Colombia and Venezuela (genotype 2), and are in agreement with previously published mitochondrial COI gene sequences interpreted as incipient species. Overall, it appears that two main factors have contributed to the genetic differentiation between the population clusters: physical distance between the populations and the differences in effective population sizes among the subpopulations. © 2008 Mirabello et al; licensee BioMed Central Ltd.
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spelling Mirabello, LisaVineis, Joseph H.Yanoviak, Stephen P.Scarpassa, Vera MargaretePôvoa, Marinete MarinsPadilla, Norma R.Acheé, Nicole L.Conn, Jan E.2020-06-03T20:53:08Z2020-06-03T20:53:08Z2008https://repositorio.inpa.gov.br/handle/1/1633210.1186/1472-6785-8-3Background. Anopheles darlingi is the most important malaria vector in the Neotropics. An understanding of A. darlingi's population structure and contemporary gene flow patterns is necessary if vector populations are to be successfully controlled. We assessed population genetic structure and levels of differentiation based on 1,376 samples from 31 localities throughout the Peruvian and Brazilian Amazon and Central America using 5-8 microsatellite loci. Results. We found high levels of polymorphism for all of the Amazonian populations (mean RS = 7.62, mean HO = 0.742), and low levels for the Belize and Guatemalan populations (mean RS = 4.3, mean HO = 0.457). The Bayesian clustering analysis revealed five population clusters: northeastern Amazonian Brazil, southeastern and central Amazonian Brazil, western and central Amazonian Brazil, Peruvian Amazon, and the Central American populations. Within Central America there was low non-significant differentiation, except for between the populations separated by the Maya Mountains. Within Amazonia there was a moderate level of significant differentiation attributed to isolation by distance. Within Peru there was no significant population structure and low differentiation, and some evidence of a population expansion. The pairwise estimates of genetic differentiation between Central America and Amazonian populations were all very high and highly significant (FST = 0.1859 - 0.3901, P < 0.05). Both the DA and FST distance-based trees illustrated the main division to be between Central America and Amazonia. Conclusion. We detected a large amount of population structure in Amazonia, with three population clusters within Brazil and one including the Peru populations. The considerable differences in Ne among the populations may have contributed to the observed genetic differentiation. All of the data suggest that the primary division within A. darlingi corresponds to two white gene genotypes between Amazonia (genotype 1) and Central America, parts of Colombia and Venezuela (genotype 2), and are in agreement with previously published mitochondrial COI gene sequences interpreted as incipient species. Overall, it appears that two main factors have contributed to the genetic differentiation between the population clusters: physical distance between the populations and the differences in effective population sizes among the subpopulations. © 2008 Mirabello et al; licensee BioMed Central Ltd.Volume 8Attribution-NonCommercial-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessAnopheles DarlingiMicrosatellite DnaAnimalsAnophelesBayes TheoremCentral AmericaClassificationDisease CarrierDisease TransmissionGenetic VariabilityGeneticsGenotypeMalariaPopulation DensitySouth AmericaAnimalAnophelesBayes TheoremCentral AmericaGenotypeInsect VectorsMalariaMicrosatellite RepeatsPopulation DensitySouth AmericaVariation (genetics)Microsatellite data suggest significant population structure and differentiation within the malaria vector Anopheles darlingi in Central and South Americainfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleBMC Ecologyengreponame:Repositório Institucional do INPAinstname:Instituto Nacional de Pesquisas da Amazônia (INPA)instacron:INPAORIGINALartigo-inpa.pdfartigo-inpa.pdfapplication/pdf2464397https://repositorio.inpa.gov.br/bitstream/1/16332/1/artigo-inpa.pdfbe223b3f91e0befa2f36685aac6977c1MD511/163322020-06-03 17:04:41.875oai:repositorio:1/16332Repositório de PublicaçõesPUBhttps://repositorio.inpa.gov.br/oai/requestopendoar:2020-06-03T21:04:41Repositório Institucional do INPA - Instituto Nacional de Pesquisas da Amazônia (INPA)false
dc.title.en.fl_str_mv Microsatellite data suggest significant population structure and differentiation within the malaria vector Anopheles darlingi in Central and South America
title Microsatellite data suggest significant population structure and differentiation within the malaria vector Anopheles darlingi in Central and South America
spellingShingle Microsatellite data suggest significant population structure and differentiation within the malaria vector Anopheles darlingi in Central and South America
Mirabello, Lisa
Anopheles Darlingi
Microsatellite Dna
Animals
Anopheles
Bayes Theorem
Central America
Classification
Disease Carrier
Disease Transmission
Genetic Variability
Genetics
Genotype
Malaria
Population Density
South America
Animal
Anopheles
Bayes Theorem
Central America
Genotype
Insect Vectors
Malaria
Microsatellite Repeats
Population Density
South America
Variation (genetics)
title_short Microsatellite data suggest significant population structure and differentiation within the malaria vector Anopheles darlingi in Central and South America
title_full Microsatellite data suggest significant population structure and differentiation within the malaria vector Anopheles darlingi in Central and South America
title_fullStr Microsatellite data suggest significant population structure and differentiation within the malaria vector Anopheles darlingi in Central and South America
title_full_unstemmed Microsatellite data suggest significant population structure and differentiation within the malaria vector Anopheles darlingi in Central and South America
title_sort Microsatellite data suggest significant population structure and differentiation within the malaria vector Anopheles darlingi in Central and South America
author Mirabello, Lisa
author_facet Mirabello, Lisa
Vineis, Joseph H.
Yanoviak, Stephen P.
Scarpassa, Vera Margarete
Pôvoa, Marinete Marins
Padilla, Norma R.
Acheé, Nicole L.
Conn, Jan E.
author_role author
author2 Vineis, Joseph H.
Yanoviak, Stephen P.
Scarpassa, Vera Margarete
Pôvoa, Marinete Marins
Padilla, Norma R.
Acheé, Nicole L.
Conn, Jan E.
author2_role author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Mirabello, Lisa
Vineis, Joseph H.
Yanoviak, Stephen P.
Scarpassa, Vera Margarete
Pôvoa, Marinete Marins
Padilla, Norma R.
Acheé, Nicole L.
Conn, Jan E.
dc.subject.eng.fl_str_mv Anopheles Darlingi
Microsatellite Dna
Animals
Anopheles
Bayes Theorem
Central America
Classification
Disease Carrier
Disease Transmission
Genetic Variability
Genetics
Genotype
Malaria
Population Density
South America
Animal
Anopheles
Bayes Theorem
Central America
Genotype
Insect Vectors
Malaria
Microsatellite Repeats
Population Density
South America
Variation (genetics)
topic Anopheles Darlingi
Microsatellite Dna
Animals
Anopheles
Bayes Theorem
Central America
Classification
Disease Carrier
Disease Transmission
Genetic Variability
Genetics
Genotype
Malaria
Population Density
South America
Animal
Anopheles
Bayes Theorem
Central America
Genotype
Insect Vectors
Malaria
Microsatellite Repeats
Population Density
South America
Variation (genetics)
description Background. Anopheles darlingi is the most important malaria vector in the Neotropics. An understanding of A. darlingi's population structure and contemporary gene flow patterns is necessary if vector populations are to be successfully controlled. We assessed population genetic structure and levels of differentiation based on 1,376 samples from 31 localities throughout the Peruvian and Brazilian Amazon and Central America using 5-8 microsatellite loci. Results. We found high levels of polymorphism for all of the Amazonian populations (mean RS = 7.62, mean HO = 0.742), and low levels for the Belize and Guatemalan populations (mean RS = 4.3, mean HO = 0.457). The Bayesian clustering analysis revealed five population clusters: northeastern Amazonian Brazil, southeastern and central Amazonian Brazil, western and central Amazonian Brazil, Peruvian Amazon, and the Central American populations. Within Central America there was low non-significant differentiation, except for between the populations separated by the Maya Mountains. Within Amazonia there was a moderate level of significant differentiation attributed to isolation by distance. Within Peru there was no significant population structure and low differentiation, and some evidence of a population expansion. The pairwise estimates of genetic differentiation between Central America and Amazonian populations were all very high and highly significant (FST = 0.1859 - 0.3901, P < 0.05). Both the DA and FST distance-based trees illustrated the main division to be between Central America and Amazonia. Conclusion. We detected a large amount of population structure in Amazonia, with three population clusters within Brazil and one including the Peru populations. The considerable differences in Ne among the populations may have contributed to the observed genetic differentiation. All of the data suggest that the primary division within A. darlingi corresponds to two white gene genotypes between Amazonia (genotype 1) and Central America, parts of Colombia and Venezuela (genotype 2), and are in agreement with previously published mitochondrial COI gene sequences interpreted as incipient species. Overall, it appears that two main factors have contributed to the genetic differentiation between the population clusters: physical distance between the populations and the differences in effective population sizes among the subpopulations. © 2008 Mirabello et al; licensee BioMed Central Ltd.
publishDate 2008
dc.date.issued.fl_str_mv 2008
dc.date.accessioned.fl_str_mv 2020-06-03T20:53:08Z
dc.date.available.fl_str_mv 2020-06-03T20:53:08Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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status_str publishedVersion
dc.identifier.uri.fl_str_mv https://repositorio.inpa.gov.br/handle/1/16332
dc.identifier.doi.none.fl_str_mv 10.1186/1472-6785-8-3
url https://repositorio.inpa.gov.br/handle/1/16332
identifier_str_mv 10.1186/1472-6785-8-3
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartof.pt_BR.fl_str_mv Volume 8
dc.rights.driver.fl_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv BMC Ecology
publisher.none.fl_str_mv BMC Ecology
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