Population genetic structure of the major malaria vector Anopheles darlingi (Diptera: Culicidae) from the Brazilian Amazon, using microsatellite markers

Detalhes bibliográficos
Autor(a) principal: Scarpassa, Vera Margarete
Data de Publicação: 2007
Outros Autores: Conn, Jan E.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional do INPA
Texto Completo: https://repositorio.inpa.gov.br/handle/1/14524
Resumo: The population genetic structure of Anopheles darlingi, the major human malaria vector in the Neotropics, was examined using seven microsatellite loci from nine localities in central and western Amazonian Brazil. High levels of genetic variability were detected (5-25 alleles per locus; HE = 0.519-0.949). There was deviation from Hardy-Weinberg Equilibrium for 59.79% of the tests due to heterozygote deficits, while the analysis of linkage disequilibrium was significant for only two of 189 (1.05%) tests, most likely caused by null alleles. Genetic differentiation (FST = 0.001-0.095; Nm = 4.7-363.8) indicates that gene flow is extensive among locations ≤ 152 km apart (with two exceptions) and reduced, but not absent, at a larger geographic scale. Genetic and geographic distances were significantly correlated (R2 = 0.893, P < 0.0002), supporting the isolation by distance (IBD) model. The overall estimate of Ne was 202.4 individuals under the linkage disequilibrium model, and ∞ under the heterozygote excess model. Analysis of molecular variance showed that nearly all variation (∼ 94%) was within sample locations. The UPGMA phenogram clustered the samples geographically, with one branch including 5/6 of the state of Amazonas localities and the other branch the Acre, Rondônia, and remaining Amazonas localities. Taken together, these data suggest little genetic structure for An. darlingi from central and western Amazonian Brazil. These findings also imply that the IBD model explains nearly all of the differentiation detected. In practical terms, populations of An. darlingi at distances ≤ 152 km should respond similarly to vector control measures, because of high gene flow.
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spelling Scarpassa, Vera MargareteConn, Jan E.2020-04-24T16:49:26Z2020-04-24T16:49:26Z2007https://repositorio.inpa.gov.br/handle/1/1452410.1590/S0074-02762007005000045The population genetic structure of Anopheles darlingi, the major human malaria vector in the Neotropics, was examined using seven microsatellite loci from nine localities in central and western Amazonian Brazil. High levels of genetic variability were detected (5-25 alleles per locus; HE = 0.519-0.949). There was deviation from Hardy-Weinberg Equilibrium for 59.79% of the tests due to heterozygote deficits, while the analysis of linkage disequilibrium was significant for only two of 189 (1.05%) tests, most likely caused by null alleles. Genetic differentiation (FST = 0.001-0.095; Nm = 4.7-363.8) indicates that gene flow is extensive among locations ≤ 152 km apart (with two exceptions) and reduced, but not absent, at a larger geographic scale. Genetic and geographic distances were significantly correlated (R2 = 0.893, P < 0.0002), supporting the isolation by distance (IBD) model. The overall estimate of Ne was 202.4 individuals under the linkage disequilibrium model, and ∞ under the heterozygote excess model. Analysis of molecular variance showed that nearly all variation (∼ 94%) was within sample locations. The UPGMA phenogram clustered the samples geographically, with one branch including 5/6 of the state of Amazonas localities and the other branch the Acre, Rondônia, and remaining Amazonas localities. Taken together, these data suggest little genetic structure for An. darlingi from central and western Amazonian Brazil. These findings also imply that the IBD model explains nearly all of the differentiation detected. In practical terms, populations of An. darlingi at distances ≤ 152 km should respond similarly to vector control measures, because of high gene flow.Volume 102, Número 3, Pags. 319-327Attribution-NonCommercial-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessDnaMicrosatellite DnaAnimalsAnophelesBrasilClassificationDisease CarrierDisease TransmissionGenetic MarkerGenetic VariabilityGeneticsHumanMalariaGenetics, PopulationAnimalAnophelesBrasilDnaGenetic MarkersGenetics, PopulationHumansInsect VectorsMalariaMicrosatellite RepeatsVariation (genetics)Anopheles DarlingiCulicidaeDipteraPopulation genetic structure of the major malaria vector Anopheles darlingi (Diptera: Culicidae) from the Brazilian Amazon, using microsatellite markersinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleMemórias do Instituto Oswaldo Cruzengreponame:Repositório Institucional do INPAinstname:Instituto Nacional de Pesquisas da Amazônia (INPA)instacron:INPAORIGINALartigo-inpa.pdfapplication/pdf162232https://repositorio.inpa.gov.br/bitstream/1/14524/1/artigo-inpa.pdf1c46cc382692666e216488baa58fc5f8MD51CC-LICENSElicense_rdfapplication/octet-stream914https://repositorio.inpa.gov.br/bitstream/1/14524/2/license_rdf4d2950bda3d176f570a9f8b328dfbbefMD521/145242020-07-14 09:05:25.684oai:repositorio:1/14524Repositório de PublicaçõesPUBhttps://repositorio.inpa.gov.br/oai/requestopendoar:2020-07-14T13:05:25Repositório Institucional do INPA - Instituto Nacional de Pesquisas da Amazônia (INPA)false
dc.title.en.fl_str_mv Population genetic structure of the major malaria vector Anopheles darlingi (Diptera: Culicidae) from the Brazilian Amazon, using microsatellite markers
title Population genetic structure of the major malaria vector Anopheles darlingi (Diptera: Culicidae) from the Brazilian Amazon, using microsatellite markers
spellingShingle Population genetic structure of the major malaria vector Anopheles darlingi (Diptera: Culicidae) from the Brazilian Amazon, using microsatellite markers
Scarpassa, Vera Margarete
Dna
Microsatellite Dna
Animals
Anopheles
Brasil
Classification
Disease Carrier
Disease Transmission
Genetic Marker
Genetic Variability
Genetics
Human
Malaria
Genetics, Population
Animal
Anopheles
Brasil
Dna
Genetic Markers
Genetics, Population
Humans
Insect Vectors
Malaria
Microsatellite Repeats
Variation (genetics)
Anopheles Darlingi
Culicidae
Diptera
title_short Population genetic structure of the major malaria vector Anopheles darlingi (Diptera: Culicidae) from the Brazilian Amazon, using microsatellite markers
title_full Population genetic structure of the major malaria vector Anopheles darlingi (Diptera: Culicidae) from the Brazilian Amazon, using microsatellite markers
title_fullStr Population genetic structure of the major malaria vector Anopheles darlingi (Diptera: Culicidae) from the Brazilian Amazon, using microsatellite markers
title_full_unstemmed Population genetic structure of the major malaria vector Anopheles darlingi (Diptera: Culicidae) from the Brazilian Amazon, using microsatellite markers
title_sort Population genetic structure of the major malaria vector Anopheles darlingi (Diptera: Culicidae) from the Brazilian Amazon, using microsatellite markers
author Scarpassa, Vera Margarete
author_facet Scarpassa, Vera Margarete
Conn, Jan E.
author_role author
author2 Conn, Jan E.
author2_role author
dc.contributor.author.fl_str_mv Scarpassa, Vera Margarete
Conn, Jan E.
dc.subject.eng.fl_str_mv Dna
Microsatellite Dna
Animals
Anopheles
Brasil
Classification
Disease Carrier
Disease Transmission
Genetic Marker
Genetic Variability
Genetics
Human
Malaria
Genetics, Population
Animal
Anopheles
Brasil
Dna
Genetic Markers
Genetics, Population
Humans
Insect Vectors
Malaria
Microsatellite Repeats
Variation (genetics)
Anopheles Darlingi
Culicidae
Diptera
topic Dna
Microsatellite Dna
Animals
Anopheles
Brasil
Classification
Disease Carrier
Disease Transmission
Genetic Marker
Genetic Variability
Genetics
Human
Malaria
Genetics, Population
Animal
Anopheles
Brasil
Dna
Genetic Markers
Genetics, Population
Humans
Insect Vectors
Malaria
Microsatellite Repeats
Variation (genetics)
Anopheles Darlingi
Culicidae
Diptera
description The population genetic structure of Anopheles darlingi, the major human malaria vector in the Neotropics, was examined using seven microsatellite loci from nine localities in central and western Amazonian Brazil. High levels of genetic variability were detected (5-25 alleles per locus; HE = 0.519-0.949). There was deviation from Hardy-Weinberg Equilibrium for 59.79% of the tests due to heterozygote deficits, while the analysis of linkage disequilibrium was significant for only two of 189 (1.05%) tests, most likely caused by null alleles. Genetic differentiation (FST = 0.001-0.095; Nm = 4.7-363.8) indicates that gene flow is extensive among locations ≤ 152 km apart (with two exceptions) and reduced, but not absent, at a larger geographic scale. Genetic and geographic distances were significantly correlated (R2 = 0.893, P < 0.0002), supporting the isolation by distance (IBD) model. The overall estimate of Ne was 202.4 individuals under the linkage disequilibrium model, and ∞ under the heterozygote excess model. Analysis of molecular variance showed that nearly all variation (∼ 94%) was within sample locations. The UPGMA phenogram clustered the samples geographically, with one branch including 5/6 of the state of Amazonas localities and the other branch the Acre, Rondônia, and remaining Amazonas localities. Taken together, these data suggest little genetic structure for An. darlingi from central and western Amazonian Brazil. These findings also imply that the IBD model explains nearly all of the differentiation detected. In practical terms, populations of An. darlingi at distances ≤ 152 km should respond similarly to vector control measures, because of high gene flow.
publishDate 2007
dc.date.issued.fl_str_mv 2007
dc.date.accessioned.fl_str_mv 2020-04-24T16:49:26Z
dc.date.available.fl_str_mv 2020-04-24T16:49:26Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://repositorio.inpa.gov.br/handle/1/14524
dc.identifier.doi.none.fl_str_mv 10.1590/S0074-02762007005000045
url https://repositorio.inpa.gov.br/handle/1/14524
identifier_str_mv 10.1590/S0074-02762007005000045
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartof.pt_BR.fl_str_mv Volume 102, Número 3, Pags. 319-327
dc.rights.driver.fl_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Memórias do Instituto Oswaldo Cruz
publisher.none.fl_str_mv Memórias do Instituto Oswaldo Cruz
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