Transferrin polymorphism in Central Amazon populations of pescada,Plagioscion squamosissimus
Autor(a) principal: | |
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Data de Publicação: | 2002 |
Outros Autores: | , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional do INPA |
Texto Completo: | https://repositorio.inpa.gov.br/handle/1/16410 |
Resumo: | Blood plasma of 253 specimens from eight population samples of the sciaenid fish, pescada (Plagioscion squamosissimus), caught from four sites in the Central Amazon, was tested for molecular variants of transferrin. Starch gel electrophoresis was used to distinguish six species of transferrin molecules; 12 of the 21 theoretically possible genotypes were found. There were highly significant departures from genetic equilibrium in seven of the eight population samples (chi-square (χ2) test for Hardy-Weinberg expectations) due to an excess of homozygotes and a corresponding deficiency of heterozygotes. A dendrogram based on UPGMA cluster analysis of genetic distances at the transferrin gene locus, estimated among the population samples and statistical analyses of the distribution of Tf allele frequencies, indicated three genetically discreet sub-populations of P. squamosissimus. The three sub-populations, "Careiro/Iranduba", "Coari" and "Tefe", were found to have high frequencies of alleles Tf2, Tf4 and Tf3, respectively. This genetic instability may be attributed to genetically discreet "allopatric stocklets", which diverged during past isolation. |
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Teixeira, Aylton SaturninoJamieson, AlanRaposo, José Carlos Paula2020-06-04T15:17:42Z2020-06-04T15:17:42Z2002https://repositorio.inpa.gov.br/handle/1/16410Blood plasma of 253 specimens from eight population samples of the sciaenid fish, pescada (Plagioscion squamosissimus), caught from four sites in the Central Amazon, was tested for molecular variants of transferrin. Starch gel electrophoresis was used to distinguish six species of transferrin molecules; 12 of the 21 theoretically possible genotypes were found. There were highly significant departures from genetic equilibrium in seven of the eight population samples (chi-square (χ2) test for Hardy-Weinberg expectations) due to an excess of homozygotes and a corresponding deficiency of heterozygotes. A dendrogram based on UPGMA cluster analysis of genetic distances at the transferrin gene locus, estimated among the population samples and statistical analyses of the distribution of Tf allele frequencies, indicated three genetically discreet sub-populations of P. squamosissimus. The three sub-populations, "Careiro/Iranduba", "Coari" and "Tefe", were found to have high frequencies of alleles Tf2, Tf4 and Tf3, respectively. This genetic instability may be attributed to genetically discreet "allopatric stocklets", which diverged during past isolation.Volume 1, Número 3, Pags. 216-226Attribution-NonCommercial-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessTransferrinTransferrinAnimals ExperimentChi Square TestCluster AnalysisContingency TableControlled StudyDemographyGel ElectrophoresisGene FrequencyGene IsolationGene LocusGenetic AnalysisGenetic DistanceGenetic MarkerPolymorphism, GeneticGenetic StabilityGenetic VariabilityGenotypeHeterozygosityHistogramHomozygoteNonhumanPhylogenetic TreePlagioscion SquamosissimusPopulation DifferentiationPopulation StructureStatistical AnalysisTeleostTransferrin Blood LevelAlleleAnimalsBrasilEcosystemFishGene FrequencyGeneticsAnimalsiaPlagioscionPlagioscion SquamosissimumPlagioscion SquamosissimusTeleosteiAllelesAnimalBrasilEcosystemElectrophoresis, Starch GelFishesGene FrequencyGenotypePolymorphism, GeneticTransferrinVariation (genetics)Transferrin polymorphism in Central Amazon populations of pescada,Plagioscion squamosissimusinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Researchengreponame:Repositório Institucional do INPAinstname:Instituto Nacional de Pesquisas da Amazônia (INPA)instacron:INPAORIGINALartigo-inpa.pdfartigo-inpa.pdfapplication/pdf747817https://repositorio.inpa.gov.br/bitstream/1/16410/1/artigo-inpa.pdf647aa0ec4164e55a676ff2426a9a5efbMD511/164102020-06-04 11:33:44.583oai:repositorio:1/16410Repositório de PublicaçõesPUBhttps://repositorio.inpa.gov.br/oai/requestopendoar:2020-06-04T15:33:44Repositório Institucional do INPA - Instituto Nacional de Pesquisas da Amazônia (INPA)false |
dc.title.en.fl_str_mv |
Transferrin polymorphism in Central Amazon populations of pescada,Plagioscion squamosissimus |
title |
Transferrin polymorphism in Central Amazon populations of pescada,Plagioscion squamosissimus |
spellingShingle |
Transferrin polymorphism in Central Amazon populations of pescada,Plagioscion squamosissimus Teixeira, Aylton Saturnino Transferrin Transferrin Animals Experiment Chi Square Test Cluster Analysis Contingency Table Controlled Study Demography Gel Electrophoresis Gene Frequency Gene Isolation Gene Locus Genetic Analysis Genetic Distance Genetic Marker Polymorphism, Genetic Genetic Stability Genetic Variability Genotype Heterozygosity Histogram Homozygote Nonhuman Phylogenetic Tree Plagioscion Squamosissimus Population Differentiation Population Structure Statistical Analysis Teleost Transferrin Blood Level Allele Animals Brasil Ecosystem Fish Gene Frequency Genetics Animalsia Plagioscion Plagioscion Squamosissimum Plagioscion Squamosissimus Teleostei Alleles Animal Brasil Ecosystem Electrophoresis, Starch Gel Fishes Gene Frequency Genotype Polymorphism, Genetic Transferrin Variation (genetics) |
title_short |
Transferrin polymorphism in Central Amazon populations of pescada,Plagioscion squamosissimus |
title_full |
Transferrin polymorphism in Central Amazon populations of pescada,Plagioscion squamosissimus |
title_fullStr |
Transferrin polymorphism in Central Amazon populations of pescada,Plagioscion squamosissimus |
title_full_unstemmed |
Transferrin polymorphism in Central Amazon populations of pescada,Plagioscion squamosissimus |
title_sort |
Transferrin polymorphism in Central Amazon populations of pescada,Plagioscion squamosissimus |
author |
Teixeira, Aylton Saturnino |
author_facet |
Teixeira, Aylton Saturnino Jamieson, Alan Raposo, José Carlos Paula |
author_role |
author |
author2 |
Jamieson, Alan Raposo, José Carlos Paula |
author2_role |
author author |
dc.contributor.author.fl_str_mv |
Teixeira, Aylton Saturnino Jamieson, Alan Raposo, José Carlos Paula |
dc.subject.eng.fl_str_mv |
Transferrin Transferrin Animals Experiment Chi Square Test Cluster Analysis Contingency Table Controlled Study Demography Gel Electrophoresis Gene Frequency Gene Isolation Gene Locus Genetic Analysis Genetic Distance Genetic Marker Polymorphism, Genetic Genetic Stability Genetic Variability Genotype Heterozygosity Histogram Homozygote Nonhuman Phylogenetic Tree Plagioscion Squamosissimus Population Differentiation Population Structure Statistical Analysis Teleost Transferrin Blood Level Allele Animals Brasil Ecosystem Fish Gene Frequency Genetics Animalsia Plagioscion Plagioscion Squamosissimum Plagioscion Squamosissimus Teleostei Alleles Animal Brasil Ecosystem Electrophoresis, Starch Gel Fishes Gene Frequency Genotype Polymorphism, Genetic Transferrin Variation (genetics) |
topic |
Transferrin Transferrin Animals Experiment Chi Square Test Cluster Analysis Contingency Table Controlled Study Demography Gel Electrophoresis Gene Frequency Gene Isolation Gene Locus Genetic Analysis Genetic Distance Genetic Marker Polymorphism, Genetic Genetic Stability Genetic Variability Genotype Heterozygosity Histogram Homozygote Nonhuman Phylogenetic Tree Plagioscion Squamosissimus Population Differentiation Population Structure Statistical Analysis Teleost Transferrin Blood Level Allele Animals Brasil Ecosystem Fish Gene Frequency Genetics Animalsia Plagioscion Plagioscion Squamosissimum Plagioscion Squamosissimus Teleostei Alleles Animal Brasil Ecosystem Electrophoresis, Starch Gel Fishes Gene Frequency Genotype Polymorphism, Genetic Transferrin Variation (genetics) |
description |
Blood plasma of 253 specimens from eight population samples of the sciaenid fish, pescada (Plagioscion squamosissimus), caught from four sites in the Central Amazon, was tested for molecular variants of transferrin. Starch gel electrophoresis was used to distinguish six species of transferrin molecules; 12 of the 21 theoretically possible genotypes were found. There were highly significant departures from genetic equilibrium in seven of the eight population samples (chi-square (χ2) test for Hardy-Weinberg expectations) due to an excess of homozygotes and a corresponding deficiency of heterozygotes. A dendrogram based on UPGMA cluster analysis of genetic distances at the transferrin gene locus, estimated among the population samples and statistical analyses of the distribution of Tf allele frequencies, indicated three genetically discreet sub-populations of P. squamosissimus. The three sub-populations, "Careiro/Iranduba", "Coari" and "Tefe", were found to have high frequencies of alleles Tf2, Tf4 and Tf3, respectively. This genetic instability may be attributed to genetically discreet "allopatric stocklets", which diverged during past isolation. |
publishDate |
2002 |
dc.date.issued.fl_str_mv |
2002 |
dc.date.accessioned.fl_str_mv |
2020-06-04T15:17:42Z |
dc.date.available.fl_str_mv |
2020-06-04T15:17:42Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://repositorio.inpa.gov.br/handle/1/16410 |
url |
https://repositorio.inpa.gov.br/handle/1/16410 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.ispartof.pt_BR.fl_str_mv |
Volume 1, Número 3, Pags. 216-226 |
dc.rights.driver.fl_str_mv |
Attribution-NonCommercial-NoDerivs 3.0 Brazil http://creativecommons.org/licenses/by-nc-nd/3.0/br/ info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
Attribution-NonCommercial-NoDerivs 3.0 Brazil http://creativecommons.org/licenses/by-nc-nd/3.0/br/ |
eu_rights_str_mv |
openAccess |
dc.publisher.none.fl_str_mv |
Genetics and Molecular Research |
publisher.none.fl_str_mv |
Genetics and Molecular Research |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional do INPA instname:Instituto Nacional de Pesquisas da Amazônia (INPA) instacron:INPA |
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Instituto Nacional de Pesquisas da Amazônia (INPA) |
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INPA |
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INPA |
reponame_str |
Repositório Institucional do INPA |
collection |
Repositório Institucional do INPA |
bitstream.url.fl_str_mv |
https://repositorio.inpa.gov.br/bitstream/1/16410/1/artigo-inpa.pdf |
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647aa0ec4164e55a676ff2426a9a5efb |
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Repositório Institucional do INPA - Instituto Nacional de Pesquisas da Amazônia (INPA) |
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