Evaluation of polymerase chain reaction in the diagnosis of pulmonary tuberculosis in indigenous and non-indigenous patients
Autor(a) principal: | |
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Data de Publicação: | 2006 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional do INPA |
Texto Completo: | https://repositorio.inpa.gov.br/handle/1/16361 |
Resumo: | Objective: To evaluate the accuracy of bacteriological methods and of polymerase chain reaction (with primers specific for IS6110 of the Mycobacterium tuberculosis complex) in testing sputum samples from indigenous (Amerindian) and non-indigenous patients. Methods: A total of 214 sputum samples (154 from indigenous patients and 60 from nonindigenous patients) were analyzed in order to determine the accuracy of smear microscopy (direct and concentrated versions) for acid-fast bacilli, culture, and polymerase chain reaction. Results: Both microscopy methods presented low sensitivity in comparison with culture and polymerase chain reaction. Specificity ranged from 91% to 100%, the concentrated acid-fast smear technique being the least specific. Nontuberculous mycobacteria were isolated three times more frequently in samples from indigenous patients than in those from non-indigenous patients. False-positive and false-negative polymerase chain reaction results were more common in the indigenous population. Conclusion: Positivity and isolation of nontuberculous mycobacteria in the acid-fast smear in conjunction with polymerase chain reaction positivity raise the following hypotheses: nontuberculous mycobacteria species with DNA regions homologous to, or even still possessing, the M. tuberculosis IS6110 exist in the Amazon; colonization of the oropharynx or of a tuberculous lesion accelerates the growth of the nontuberculous mycobacteria present in the sputum samples, making it impossible to isolate M. tuberculosis; A history of tuberculosis results in positivity for M. tuberculosis DNA. The absence of bacteriological positivity in the presence of polymerase chain reaction positivity raises questions regarding the inherent technical characteristics of the bacteriological methods or regarding patient history of tuberculosis. |
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Santos, Maria Cristina dosOgusku, Maurício MorishiMiranda, José de MoraesSantos, Maria Cristina dosSalem, Júlia Ignez2020-06-03T21:27:35Z2020-06-03T21:27:35Z2006https://repositorio.inpa.gov.br/handle/1/1636110.1590/S1806-37132006000900010Objective: To evaluate the accuracy of bacteriological methods and of polymerase chain reaction (with primers specific for IS6110 of the Mycobacterium tuberculosis complex) in testing sputum samples from indigenous (Amerindian) and non-indigenous patients. Methods: A total of 214 sputum samples (154 from indigenous patients and 60 from nonindigenous patients) were analyzed in order to determine the accuracy of smear microscopy (direct and concentrated versions) for acid-fast bacilli, culture, and polymerase chain reaction. Results: Both microscopy methods presented low sensitivity in comparison with culture and polymerase chain reaction. Specificity ranged from 91% to 100%, the concentrated acid-fast smear technique being the least specific. Nontuberculous mycobacteria were isolated three times more frequently in samples from indigenous patients than in those from non-indigenous patients. False-positive and false-negative polymerase chain reaction results were more common in the indigenous population. Conclusion: Positivity and isolation of nontuberculous mycobacteria in the acid-fast smear in conjunction with polymerase chain reaction positivity raise the following hypotheses: nontuberculous mycobacteria species with DNA regions homologous to, or even still possessing, the M. tuberculosis IS6110 exist in the Amazon; colonization of the oropharynx or of a tuberculous lesion accelerates the growth of the nontuberculous mycobacteria present in the sputum samples, making it impossible to isolate M. tuberculosis; A history of tuberculosis results in positivity for M. tuberculosis DNA. The absence of bacteriological positivity in the presence of polymerase chain reaction positivity raises questions regarding the inherent technical characteristics of the bacteriological methods or regarding patient history of tuberculosis.Volume 32, Número 3, Pags. 234-240Attribution-NonCommercial-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessDna, BacterialAmerican IndianComparative StudyEvaluationGeneticsHumanIsolation And PurificationLung TuberculosisMethodologyMicrobiological ExaminationMicrobiologyMycobacterium TuberculosisPolymerase Chain ReactionReproducibilitySensitivity And SpecificitySputumBacteriological TechniquesDna, BacterialHumansIndians, South AmericanMycobacterium TuberculosisPolymerase Chain ReactionReproducibility Of ResultsSensitivity And SpecificitySputumTuberculosis, PulmonaryEvaluation of polymerase chain reaction in the diagnosis of pulmonary tuberculosis in indigenous and non-indigenous patientsAvaliação da reação em cadeia da polimerase no diagnóstico da tuberculose pulmonar em pacientes indígenas e não indígenasinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleJornal Brasileiro de Pneumologiaengreponame:Repositório Institucional do INPAinstname:Instituto Nacional de Pesquisas da Amazônia (INPA)instacron:INPAORIGINALartigo-inpa.pdfartigo-inpa.pdfapplication/pdf73424https://repositorio.inpa.gov.br/bitstream/1/16361/1/artigo-inpa.pdf63e40354f4ebf5329995a16d7716ab53MD511/163612020-06-03 17:33:51.819oai:repositorio:1/16361Repositório de PublicaçõesPUBhttps://repositorio.inpa.gov.br/oai/requestopendoar:2020-06-03T21:33:51Repositório Institucional do INPA - Instituto Nacional de Pesquisas da Amazônia (INPA)false |
dc.title.en.fl_str_mv |
Evaluation of polymerase chain reaction in the diagnosis of pulmonary tuberculosis in indigenous and non-indigenous patients |
dc.title.alternative.pt_BR.fl_str_mv |
Avaliação da reação em cadeia da polimerase no diagnóstico da tuberculose pulmonar em pacientes indígenas e não indígenas |
title |
Evaluation of polymerase chain reaction in the diagnosis of pulmonary tuberculosis in indigenous and non-indigenous patients |
spellingShingle |
Evaluation of polymerase chain reaction in the diagnosis of pulmonary tuberculosis in indigenous and non-indigenous patients Santos, Maria Cristina dos Dna, Bacterial American Indian Comparative Study Evaluation Genetics Human Isolation And Purification Lung Tuberculosis Methodology Microbiological Examination Microbiology Mycobacterium Tuberculosis Polymerase Chain Reaction Reproducibility Sensitivity And Specificity Sputum Bacteriological Techniques Dna, Bacterial Humans Indians, South American Mycobacterium Tuberculosis Polymerase Chain Reaction Reproducibility Of Results Sensitivity And Specificity Sputum Tuberculosis, Pulmonary |
title_short |
Evaluation of polymerase chain reaction in the diagnosis of pulmonary tuberculosis in indigenous and non-indigenous patients |
title_full |
Evaluation of polymerase chain reaction in the diagnosis of pulmonary tuberculosis in indigenous and non-indigenous patients |
title_fullStr |
Evaluation of polymerase chain reaction in the diagnosis of pulmonary tuberculosis in indigenous and non-indigenous patients |
title_full_unstemmed |
Evaluation of polymerase chain reaction in the diagnosis of pulmonary tuberculosis in indigenous and non-indigenous patients |
title_sort |
Evaluation of polymerase chain reaction in the diagnosis of pulmonary tuberculosis in indigenous and non-indigenous patients |
author |
Santos, Maria Cristina dos |
author_facet |
Santos, Maria Cristina dos Ogusku, Maurício Morishi Miranda, José de Moraes Salem, Júlia Ignez |
author_role |
author |
author2 |
Ogusku, Maurício Morishi Miranda, José de Moraes Salem, Júlia Ignez |
author2_role |
author author author |
dc.contributor.author.fl_str_mv |
Santos, Maria Cristina dos Ogusku, Maurício Morishi Miranda, José de Moraes Santos, Maria Cristina dos Salem, Júlia Ignez |
dc.subject.eng.fl_str_mv |
Dna, Bacterial American Indian Comparative Study Evaluation Genetics Human Isolation And Purification Lung Tuberculosis Methodology Microbiological Examination Microbiology Mycobacterium Tuberculosis Polymerase Chain Reaction Reproducibility Sensitivity And Specificity Sputum Bacteriological Techniques Dna, Bacterial Humans Indians, South American Mycobacterium Tuberculosis Polymerase Chain Reaction Reproducibility Of Results Sensitivity And Specificity Sputum Tuberculosis, Pulmonary |
topic |
Dna, Bacterial American Indian Comparative Study Evaluation Genetics Human Isolation And Purification Lung Tuberculosis Methodology Microbiological Examination Microbiology Mycobacterium Tuberculosis Polymerase Chain Reaction Reproducibility Sensitivity And Specificity Sputum Bacteriological Techniques Dna, Bacterial Humans Indians, South American Mycobacterium Tuberculosis Polymerase Chain Reaction Reproducibility Of Results Sensitivity And Specificity Sputum Tuberculosis, Pulmonary |
description |
Objective: To evaluate the accuracy of bacteriological methods and of polymerase chain reaction (with primers specific for IS6110 of the Mycobacterium tuberculosis complex) in testing sputum samples from indigenous (Amerindian) and non-indigenous patients. Methods: A total of 214 sputum samples (154 from indigenous patients and 60 from nonindigenous patients) were analyzed in order to determine the accuracy of smear microscopy (direct and concentrated versions) for acid-fast bacilli, culture, and polymerase chain reaction. Results: Both microscopy methods presented low sensitivity in comparison with culture and polymerase chain reaction. Specificity ranged from 91% to 100%, the concentrated acid-fast smear technique being the least specific. Nontuberculous mycobacteria were isolated three times more frequently in samples from indigenous patients than in those from non-indigenous patients. False-positive and false-negative polymerase chain reaction results were more common in the indigenous population. Conclusion: Positivity and isolation of nontuberculous mycobacteria in the acid-fast smear in conjunction with polymerase chain reaction positivity raise the following hypotheses: nontuberculous mycobacteria species with DNA regions homologous to, or even still possessing, the M. tuberculosis IS6110 exist in the Amazon; colonization of the oropharynx or of a tuberculous lesion accelerates the growth of the nontuberculous mycobacteria present in the sputum samples, making it impossible to isolate M. tuberculosis; A history of tuberculosis results in positivity for M. tuberculosis DNA. The absence of bacteriological positivity in the presence of polymerase chain reaction positivity raises questions regarding the inherent technical characteristics of the bacteriological methods or regarding patient history of tuberculosis. |
publishDate |
2006 |
dc.date.issued.fl_str_mv |
2006 |
dc.date.accessioned.fl_str_mv |
2020-06-03T21:27:35Z |
dc.date.available.fl_str_mv |
2020-06-03T21:27:35Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://repositorio.inpa.gov.br/handle/1/16361 |
dc.identifier.doi.none.fl_str_mv |
10.1590/S1806-37132006000900010 |
url |
https://repositorio.inpa.gov.br/handle/1/16361 |
identifier_str_mv |
10.1590/S1806-37132006000900010 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.ispartof.pt_BR.fl_str_mv |
Volume 32, Número 3, Pags. 234-240 |
dc.rights.driver.fl_str_mv |
Attribution-NonCommercial-NoDerivs 3.0 Brazil http://creativecommons.org/licenses/by-nc-nd/3.0/br/ info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
Attribution-NonCommercial-NoDerivs 3.0 Brazil http://creativecommons.org/licenses/by-nc-nd/3.0/br/ |
eu_rights_str_mv |
openAccess |
dc.publisher.none.fl_str_mv |
Jornal Brasileiro de Pneumologia |
publisher.none.fl_str_mv |
Jornal Brasileiro de Pneumologia |
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reponame:Repositório Institucional do INPA instname:Instituto Nacional de Pesquisas da Amazônia (INPA) instacron:INPA |
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INPA |
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Repositório Institucional do INPA |
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