Evaluation of polymerase chain reaction in the diagnosis of pulmonary tuberculosis in indigenous and non-indigenous patients

Detalhes bibliográficos
Autor(a) principal: Santos, Maria Cristina dos
Data de Publicação: 2006
Outros Autores: Ogusku, Maurício Morishi, Miranda, José de Moraes, Salem, Júlia Ignez
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional do INPA
Texto Completo: https://repositorio.inpa.gov.br/handle/1/16361
Resumo: Objective: To evaluate the accuracy of bacteriological methods and of polymerase chain reaction (with primers specific for IS6110 of the Mycobacterium tuberculosis complex) in testing sputum samples from indigenous (Amerindian) and non-indigenous patients. Methods: A total of 214 sputum samples (154 from indigenous patients and 60 from nonindigenous patients) were analyzed in order to determine the accuracy of smear microscopy (direct and concentrated versions) for acid-fast bacilli, culture, and polymerase chain reaction. Results: Both microscopy methods presented low sensitivity in comparison with culture and polymerase chain reaction. Specificity ranged from 91% to 100%, the concentrated acid-fast smear technique being the least specific. Nontuberculous mycobacteria were isolated three times more frequently in samples from indigenous patients than in those from non-indigenous patients. False-positive and false-negative polymerase chain reaction results were more common in the indigenous population. Conclusion: Positivity and isolation of nontuberculous mycobacteria in the acid-fast smear in conjunction with polymerase chain reaction positivity raise the following hypotheses: nontuberculous mycobacteria species with DNA regions homologous to, or even still possessing, the M. tuberculosis IS6110 exist in the Amazon; colonization of the oropharynx or of a tuberculous lesion accelerates the growth of the nontuberculous mycobacteria present in the sputum samples, making it impossible to isolate M. tuberculosis; A history of tuberculosis results in positivity for M. tuberculosis DNA. The absence of bacteriological positivity in the presence of polymerase chain reaction positivity raises questions regarding the inherent technical characteristics of the bacteriological methods or regarding patient history of tuberculosis.
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spelling Santos, Maria Cristina dosOgusku, Maurício MorishiMiranda, José de MoraesSantos, Maria Cristina dosSalem, Júlia Ignez2020-06-03T21:27:35Z2020-06-03T21:27:35Z2006https://repositorio.inpa.gov.br/handle/1/1636110.1590/S1806-37132006000900010Objective: To evaluate the accuracy of bacteriological methods and of polymerase chain reaction (with primers specific for IS6110 of the Mycobacterium tuberculosis complex) in testing sputum samples from indigenous (Amerindian) and non-indigenous patients. Methods: A total of 214 sputum samples (154 from indigenous patients and 60 from nonindigenous patients) were analyzed in order to determine the accuracy of smear microscopy (direct and concentrated versions) for acid-fast bacilli, culture, and polymerase chain reaction. Results: Both microscopy methods presented low sensitivity in comparison with culture and polymerase chain reaction. Specificity ranged from 91% to 100%, the concentrated acid-fast smear technique being the least specific. Nontuberculous mycobacteria were isolated three times more frequently in samples from indigenous patients than in those from non-indigenous patients. False-positive and false-negative polymerase chain reaction results were more common in the indigenous population. Conclusion: Positivity and isolation of nontuberculous mycobacteria in the acid-fast smear in conjunction with polymerase chain reaction positivity raise the following hypotheses: nontuberculous mycobacteria species with DNA regions homologous to, or even still possessing, the M. tuberculosis IS6110 exist in the Amazon; colonization of the oropharynx or of a tuberculous lesion accelerates the growth of the nontuberculous mycobacteria present in the sputum samples, making it impossible to isolate M. tuberculosis; A history of tuberculosis results in positivity for M. tuberculosis DNA. The absence of bacteriological positivity in the presence of polymerase chain reaction positivity raises questions regarding the inherent technical characteristics of the bacteriological methods or regarding patient history of tuberculosis.Volume 32, Número 3, Pags. 234-240Attribution-NonCommercial-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessDna, BacterialAmerican IndianComparative StudyEvaluationGeneticsHumanIsolation And PurificationLung TuberculosisMethodologyMicrobiological ExaminationMicrobiologyMycobacterium TuberculosisPolymerase Chain ReactionReproducibilitySensitivity And SpecificitySputumBacteriological TechniquesDna, BacterialHumansIndians, South AmericanMycobacterium TuberculosisPolymerase Chain ReactionReproducibility Of ResultsSensitivity And SpecificitySputumTuberculosis, PulmonaryEvaluation of polymerase chain reaction in the diagnosis of pulmonary tuberculosis in indigenous and non-indigenous patientsAvaliação da reação em cadeia da polimerase no diagnóstico da tuberculose pulmonar em pacientes indígenas e não indígenasinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleJornal Brasileiro de Pneumologiaengreponame:Repositório Institucional do INPAinstname:Instituto Nacional de Pesquisas da Amazônia (INPA)instacron:INPAORIGINALartigo-inpa.pdfartigo-inpa.pdfapplication/pdf73424https://repositorio.inpa.gov.br/bitstream/1/16361/1/artigo-inpa.pdf63e40354f4ebf5329995a16d7716ab53MD511/163612020-06-03 17:33:51.819oai:repositorio:1/16361Repositório de PublicaçõesPUBhttps://repositorio.inpa.gov.br/oai/requestopendoar:2020-06-03T21:33:51Repositório Institucional do INPA - Instituto Nacional de Pesquisas da Amazônia (INPA)false
dc.title.en.fl_str_mv Evaluation of polymerase chain reaction in the diagnosis of pulmonary tuberculosis in indigenous and non-indigenous patients
dc.title.alternative.pt_BR.fl_str_mv Avaliação da reação em cadeia da polimerase no diagnóstico da tuberculose pulmonar em pacientes indígenas e não indígenas
title Evaluation of polymerase chain reaction in the diagnosis of pulmonary tuberculosis in indigenous and non-indigenous patients
spellingShingle Evaluation of polymerase chain reaction in the diagnosis of pulmonary tuberculosis in indigenous and non-indigenous patients
Santos, Maria Cristina dos
Dna, Bacterial
American Indian
Comparative Study
Evaluation
Genetics
Human
Isolation And Purification
Lung Tuberculosis
Methodology
Microbiological Examination
Microbiology
Mycobacterium Tuberculosis
Polymerase Chain Reaction
Reproducibility
Sensitivity And Specificity
Sputum
Bacteriological Techniques
Dna, Bacterial
Humans
Indians, South American
Mycobacterium Tuberculosis
Polymerase Chain Reaction
Reproducibility Of Results
Sensitivity And Specificity
Sputum
Tuberculosis, Pulmonary
title_short Evaluation of polymerase chain reaction in the diagnosis of pulmonary tuberculosis in indigenous and non-indigenous patients
title_full Evaluation of polymerase chain reaction in the diagnosis of pulmonary tuberculosis in indigenous and non-indigenous patients
title_fullStr Evaluation of polymerase chain reaction in the diagnosis of pulmonary tuberculosis in indigenous and non-indigenous patients
title_full_unstemmed Evaluation of polymerase chain reaction in the diagnosis of pulmonary tuberculosis in indigenous and non-indigenous patients
title_sort Evaluation of polymerase chain reaction in the diagnosis of pulmonary tuberculosis in indigenous and non-indigenous patients
author Santos, Maria Cristina dos
author_facet Santos, Maria Cristina dos
Ogusku, Maurício Morishi
Miranda, José de Moraes
Salem, Júlia Ignez
author_role author
author2 Ogusku, Maurício Morishi
Miranda, José de Moraes
Salem, Júlia Ignez
author2_role author
author
author
dc.contributor.author.fl_str_mv Santos, Maria Cristina dos
Ogusku, Maurício Morishi
Miranda, José de Moraes
Santos, Maria Cristina dos
Salem, Júlia Ignez
dc.subject.eng.fl_str_mv Dna, Bacterial
American Indian
Comparative Study
Evaluation
Genetics
Human
Isolation And Purification
Lung Tuberculosis
Methodology
Microbiological Examination
Microbiology
Mycobacterium Tuberculosis
Polymerase Chain Reaction
Reproducibility
Sensitivity And Specificity
Sputum
Bacteriological Techniques
Dna, Bacterial
Humans
Indians, South American
Mycobacterium Tuberculosis
Polymerase Chain Reaction
Reproducibility Of Results
Sensitivity And Specificity
Sputum
Tuberculosis, Pulmonary
topic Dna, Bacterial
American Indian
Comparative Study
Evaluation
Genetics
Human
Isolation And Purification
Lung Tuberculosis
Methodology
Microbiological Examination
Microbiology
Mycobacterium Tuberculosis
Polymerase Chain Reaction
Reproducibility
Sensitivity And Specificity
Sputum
Bacteriological Techniques
Dna, Bacterial
Humans
Indians, South American
Mycobacterium Tuberculosis
Polymerase Chain Reaction
Reproducibility Of Results
Sensitivity And Specificity
Sputum
Tuberculosis, Pulmonary
description Objective: To evaluate the accuracy of bacteriological methods and of polymerase chain reaction (with primers specific for IS6110 of the Mycobacterium tuberculosis complex) in testing sputum samples from indigenous (Amerindian) and non-indigenous patients. Methods: A total of 214 sputum samples (154 from indigenous patients and 60 from nonindigenous patients) were analyzed in order to determine the accuracy of smear microscopy (direct and concentrated versions) for acid-fast bacilli, culture, and polymerase chain reaction. Results: Both microscopy methods presented low sensitivity in comparison with culture and polymerase chain reaction. Specificity ranged from 91% to 100%, the concentrated acid-fast smear technique being the least specific. Nontuberculous mycobacteria were isolated three times more frequently in samples from indigenous patients than in those from non-indigenous patients. False-positive and false-negative polymerase chain reaction results were more common in the indigenous population. Conclusion: Positivity and isolation of nontuberculous mycobacteria in the acid-fast smear in conjunction with polymerase chain reaction positivity raise the following hypotheses: nontuberculous mycobacteria species with DNA regions homologous to, or even still possessing, the M. tuberculosis IS6110 exist in the Amazon; colonization of the oropharynx or of a tuberculous lesion accelerates the growth of the nontuberculous mycobacteria present in the sputum samples, making it impossible to isolate M. tuberculosis; A history of tuberculosis results in positivity for M. tuberculosis DNA. The absence of bacteriological positivity in the presence of polymerase chain reaction positivity raises questions regarding the inherent technical characteristics of the bacteriological methods or regarding patient history of tuberculosis.
publishDate 2006
dc.date.issued.fl_str_mv 2006
dc.date.accessioned.fl_str_mv 2020-06-03T21:27:35Z
dc.date.available.fl_str_mv 2020-06-03T21:27:35Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://repositorio.inpa.gov.br/handle/1/16361
dc.identifier.doi.none.fl_str_mv 10.1590/S1806-37132006000900010
url https://repositorio.inpa.gov.br/handle/1/16361
identifier_str_mv 10.1590/S1806-37132006000900010
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartof.pt_BR.fl_str_mv Volume 32, Número 3, Pags. 234-240
dc.rights.driver.fl_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Jornal Brasileiro de Pneumologia
publisher.none.fl_str_mv Jornal Brasileiro de Pneumologia
dc.source.none.fl_str_mv reponame:Repositório Institucional do INPA
instname:Instituto Nacional de Pesquisas da Amazônia (INPA)
instacron:INPA
instname_str Instituto Nacional de Pesquisas da Amazônia (INPA)
instacron_str INPA
institution INPA
reponame_str Repositório Institucional do INPA
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