Electrophoresis and spectrometric analyses of adaptation-related proteins in thermally stressed Chromobacterium violaceum

Detalhes bibliográficos
Autor(a) principal: Cordeiro, Isabelle Bezerra
Data de Publicação: 2013
Outros Autores: Castro, Diogo Pereira de, Nogueira, P. P O, Angelo, P., Nogueira, Paulo Afonso, Gonçalves, José Francisco Carvalho de, Pereira, A. M.R.F., Garcia, Jerusa Simone, Souza, Gustavo H.M.F., Arruda, Marco Aurélio Zezzi, Eberlin, M. N., Astolfi-Filho, Spártaco A.T., Andrade, E. V. de, López-Lozano, Jorge Luis
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional do INPA
Texto Completo: https://repositorio.inpa.gov.br/handle/1/14992
Resumo: Chromobacterium violaceum is a Gram-negative proteobacteria found in water and soil; it is widely distributed in tropical and subtropical regions, such as the Amazon rainforest. We examined protein expression changes that occur in C. violaceum at different growth temperatures using electrophoresis and mass spectrometry. The total number of spots detected was 1985; the number ranged from 99 to 380 in each assay. The proteins that were identified spectrometrically were categorized as chaperones, proteins expressed exclusively under heat stress, enzymes involved in the respiratory and fermentation cycles, ribosomal proteins, and proteins related to transport and secretion. Controlling inverted repeat of chaperone expression and inverted repeat DNA binding sequences, as well as regions recognized by sigma factor 32, elements involved in the genetic regulation of the bacterial stress response, were identified in the promoter regions of several of the genes coding proteins, involved in the C. violaceum stress response. We found that 30°C is the optimal growth temperature for C. violaceum, whereas 25, 35, and 40°C are stressful temperatures that trigger the expression of chaperones, superoxide dismutase, a probable small heat shock protein, a probable phasing, ferrichrome-iron receptor protein, elongation factor P, and an ornithine carbamoyltransferase catabolite. This information improves our comprehension of the mechanisms involved in stress adaptation by C. violaceum. © FUNPEC-RP.
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spelling Cordeiro, Isabelle BezerraCastro, Diogo Pereira deNogueira, P. P OAngelo, P.Nogueira, Paulo AfonsoGonçalves, José Francisco Carvalho dePereira, A. M.R.F.Garcia, Jerusa SimoneSouza, Gustavo H.M.F.Arruda, Marco Aurélio ZezziEberlin, M. N.Astolfi-Filho, Spártaco A.T.Andrade, E. V. deLópez-Lozano, Jorge Luis2020-05-07T14:00:23Z2020-05-07T14:00:23Z2013https://repositorio.inpa.gov.br/handle/1/1499210.4238/2013.October.29.1Chromobacterium violaceum is a Gram-negative proteobacteria found in water and soil; it is widely distributed in tropical and subtropical regions, such as the Amazon rainforest. We examined protein expression changes that occur in C. violaceum at different growth temperatures using electrophoresis and mass spectrometry. The total number of spots detected was 1985; the number ranged from 99 to 380 in each assay. The proteins that were identified spectrometrically were categorized as chaperones, proteins expressed exclusively under heat stress, enzymes involved in the respiratory and fermentation cycles, ribosomal proteins, and proteins related to transport and secretion. Controlling inverted repeat of chaperone expression and inverted repeat DNA binding sequences, as well as regions recognized by sigma factor 32, elements involved in the genetic regulation of the bacterial stress response, were identified in the promoter regions of several of the genes coding proteins, involved in the C. violaceum stress response. We found that 30°C is the optimal growth temperature for C. violaceum, whereas 25, 35, and 40°C are stressful temperatures that trigger the expression of chaperones, superoxide dismutase, a probable small heat shock protein, a probable phasing, ferrichrome-iron receptor protein, elongation factor P, and an ornithine carbamoyltransferase catabolite. This information improves our comprehension of the mechanisms involved in stress adaptation by C. violaceum. © FUNPEC-RP.Volume 12, Número 4, Pags. 5057-5071Attribution-NonCommercial-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessBacterial ProteinCarrier ProteinChaperoneElongation FactorElongation Factor PMembrane ProteinRibosome ProteinSigma FactorSigma Factor 32Small Heat Shock ProteinSuperoxide DismutaseUnclassified DrugBacterial ProteinChaperoneBacterial GrowthChromobacterium ViolaceumElectrophoresisHeat AcclimatizationHeat-shock ResponseHeat StressInverted RepeatMass SpectrometryNonhumanPromoter RegionProtein ExpressionProteomicsAdaptationCell RespirationChromobacteriumFermentationGene Expression RegulationGeneticsGrowth, Development And AgingMetabolismOpen Reading FrameStress, PhysiologicalProceduresProteomicsTemperatureBacteria (microorganisms)Chromobacterium ViolaceumNegibacteriaProteobacteriaAdaptation, BiologicalBacterial ProteinsCell RespirationChromobacteriumFermentationGene Expression Regulation, BacterialMolecular ChaperonesOpen Reading FramesPromoter Regions, GeneticProteomicsStress, PhysiologicalTemperatureElectrophoresis and spectrometric analyses of adaptation-related proteins in thermally stressed Chromobacterium violaceuminfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Researchengreponame:Repositório Institucional do INPAinstname:Instituto Nacional de Pesquisas da Amazônia (INPA)instacron:INPAORIGINALartigo-inpa.pdfapplication/pdf594520https://repositorio.inpa.gov.br/bitstream/1/14992/1/artigo-inpa.pdf730fba79236a5f2f8e48afd1a355737fMD51CC-LICENSElicense_rdfapplication/octet-stream914https://repositorio.inpa.gov.br/bitstream/1/14992/2/license_rdf4d2950bda3d176f570a9f8b328dfbbefMD521/149922020-07-14 10:30:36.944oai:repositorio:1/14992Repositório de PublicaçõesPUBhttps://repositorio.inpa.gov.br/oai/requestopendoar:2020-07-14T14:30:36Repositório Institucional do INPA - Instituto Nacional de Pesquisas da Amazônia (INPA)false
dc.title.en.fl_str_mv Electrophoresis and spectrometric analyses of adaptation-related proteins in thermally stressed Chromobacterium violaceum
title Electrophoresis and spectrometric analyses of adaptation-related proteins in thermally stressed Chromobacterium violaceum
spellingShingle Electrophoresis and spectrometric analyses of adaptation-related proteins in thermally stressed Chromobacterium violaceum
Cordeiro, Isabelle Bezerra
Bacterial Protein
Carrier Protein
Chaperone
Elongation Factor
Elongation Factor P
Membrane Protein
Ribosome Protein
Sigma Factor
Sigma Factor 32
Small Heat Shock Protein
Superoxide Dismutase
Unclassified Drug
Bacterial Protein
Chaperone
Bacterial Growth
Chromobacterium Violaceum
Electrophoresis
Heat Acclimatization
Heat-shock Response
Heat Stress
Inverted Repeat
Mass Spectrometry
Nonhuman
Promoter Region
Protein Expression
Proteomics
Adaptation
Cell Respiration
Chromobacterium
Fermentation
Gene Expression Regulation
Genetics
Growth, Development And Aging
Metabolism
Open Reading Frame
Stress, Physiological
Procedures
Proteomics
Temperature
Bacteria (microorganisms)
Chromobacterium Violaceum
Negibacteria
Proteobacteria
Adaptation, Biological
Bacterial Proteins
Cell Respiration
Chromobacterium
Fermentation
Gene Expression Regulation, Bacterial
Molecular Chaperones
Open Reading Frames
Promoter Regions, Genetic
Proteomics
Stress, Physiological
Temperature
title_short Electrophoresis and spectrometric analyses of adaptation-related proteins in thermally stressed Chromobacterium violaceum
title_full Electrophoresis and spectrometric analyses of adaptation-related proteins in thermally stressed Chromobacterium violaceum
title_fullStr Electrophoresis and spectrometric analyses of adaptation-related proteins in thermally stressed Chromobacterium violaceum
title_full_unstemmed Electrophoresis and spectrometric analyses of adaptation-related proteins in thermally stressed Chromobacterium violaceum
title_sort Electrophoresis and spectrometric analyses of adaptation-related proteins in thermally stressed Chromobacterium violaceum
author Cordeiro, Isabelle Bezerra
author_facet Cordeiro, Isabelle Bezerra
Castro, Diogo Pereira de
Nogueira, P. P O
Angelo, P.
Nogueira, Paulo Afonso
Gonçalves, José Francisco Carvalho de
Pereira, A. M.R.F.
Garcia, Jerusa Simone
Souza, Gustavo H.M.F.
Arruda, Marco Aurélio Zezzi
Eberlin, M. N.
Astolfi-Filho, Spártaco A.T.
Andrade, E. V. de
López-Lozano, Jorge Luis
author_role author
author2 Castro, Diogo Pereira de
Nogueira, P. P O
Angelo, P.
Nogueira, Paulo Afonso
Gonçalves, José Francisco Carvalho de
Pereira, A. M.R.F.
Garcia, Jerusa Simone
Souza, Gustavo H.M.F.
Arruda, Marco Aurélio Zezzi
Eberlin, M. N.
Astolfi-Filho, Spártaco A.T.
Andrade, E. V. de
López-Lozano, Jorge Luis
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Cordeiro, Isabelle Bezerra
Castro, Diogo Pereira de
Nogueira, P. P O
Angelo, P.
Nogueira, Paulo Afonso
Gonçalves, José Francisco Carvalho de
Pereira, A. M.R.F.
Garcia, Jerusa Simone
Souza, Gustavo H.M.F.
Arruda, Marco Aurélio Zezzi
Eberlin, M. N.
Astolfi-Filho, Spártaco A.T.
Andrade, E. V. de
López-Lozano, Jorge Luis
dc.subject.eng.fl_str_mv Bacterial Protein
Carrier Protein
Chaperone
Elongation Factor
Elongation Factor P
Membrane Protein
Ribosome Protein
Sigma Factor
Sigma Factor 32
Small Heat Shock Protein
Superoxide Dismutase
Unclassified Drug
Bacterial Protein
Chaperone
Bacterial Growth
Chromobacterium Violaceum
Electrophoresis
Heat Acclimatization
Heat-shock Response
Heat Stress
Inverted Repeat
Mass Spectrometry
Nonhuman
Promoter Region
Protein Expression
Proteomics
Adaptation
Cell Respiration
Chromobacterium
Fermentation
Gene Expression Regulation
Genetics
Growth, Development And Aging
Metabolism
Open Reading Frame
Stress, Physiological
Procedures
Proteomics
Temperature
Bacteria (microorganisms)
Chromobacterium Violaceum
Negibacteria
Proteobacteria
Adaptation, Biological
Bacterial Proteins
Cell Respiration
Chromobacterium
Fermentation
Gene Expression Regulation, Bacterial
Molecular Chaperones
Open Reading Frames
Promoter Regions, Genetic
Proteomics
Stress, Physiological
Temperature
topic Bacterial Protein
Carrier Protein
Chaperone
Elongation Factor
Elongation Factor P
Membrane Protein
Ribosome Protein
Sigma Factor
Sigma Factor 32
Small Heat Shock Protein
Superoxide Dismutase
Unclassified Drug
Bacterial Protein
Chaperone
Bacterial Growth
Chromobacterium Violaceum
Electrophoresis
Heat Acclimatization
Heat-shock Response
Heat Stress
Inverted Repeat
Mass Spectrometry
Nonhuman
Promoter Region
Protein Expression
Proteomics
Adaptation
Cell Respiration
Chromobacterium
Fermentation
Gene Expression Regulation
Genetics
Growth, Development And Aging
Metabolism
Open Reading Frame
Stress, Physiological
Procedures
Proteomics
Temperature
Bacteria (microorganisms)
Chromobacterium Violaceum
Negibacteria
Proteobacteria
Adaptation, Biological
Bacterial Proteins
Cell Respiration
Chromobacterium
Fermentation
Gene Expression Regulation, Bacterial
Molecular Chaperones
Open Reading Frames
Promoter Regions, Genetic
Proteomics
Stress, Physiological
Temperature
description Chromobacterium violaceum is a Gram-negative proteobacteria found in water and soil; it is widely distributed in tropical and subtropical regions, such as the Amazon rainforest. We examined protein expression changes that occur in C. violaceum at different growth temperatures using electrophoresis and mass spectrometry. The total number of spots detected was 1985; the number ranged from 99 to 380 in each assay. The proteins that were identified spectrometrically were categorized as chaperones, proteins expressed exclusively under heat stress, enzymes involved in the respiratory and fermentation cycles, ribosomal proteins, and proteins related to transport and secretion. Controlling inverted repeat of chaperone expression and inverted repeat DNA binding sequences, as well as regions recognized by sigma factor 32, elements involved in the genetic regulation of the bacterial stress response, were identified in the promoter regions of several of the genes coding proteins, involved in the C. violaceum stress response. We found that 30°C is the optimal growth temperature for C. violaceum, whereas 25, 35, and 40°C are stressful temperatures that trigger the expression of chaperones, superoxide dismutase, a probable small heat shock protein, a probable phasing, ferrichrome-iron receptor protein, elongation factor P, and an ornithine carbamoyltransferase catabolite. This information improves our comprehension of the mechanisms involved in stress adaptation by C. violaceum. © FUNPEC-RP.
publishDate 2013
dc.date.issued.fl_str_mv 2013
dc.date.accessioned.fl_str_mv 2020-05-07T14:00:23Z
dc.date.available.fl_str_mv 2020-05-07T14:00:23Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://repositorio.inpa.gov.br/handle/1/14992
dc.identifier.doi.none.fl_str_mv 10.4238/2013.October.29.1
url https://repositorio.inpa.gov.br/handle/1/14992
identifier_str_mv 10.4238/2013.October.29.1
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartof.pt_BR.fl_str_mv Volume 12, Número 4, Pags. 5057-5071
dc.rights.driver.fl_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Genetics and Molecular Research
publisher.none.fl_str_mv Genetics and Molecular Research
dc.source.none.fl_str_mv reponame:Repositório Institucional do INPA
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