Chromosomal distribution of microsatellite repeats in Amazon cichlids genome (Pisces, Cichlidae)

Detalhes bibliográficos
Autor(a) principal: Schneider, Carlos Henrique
Data de Publicação: 2015
Outros Autores: Gross, Maria Claudia, Terêncio, Maria Leandra, Tavares, Édika Sabrina Girão Mitozo de, Martins, Cesar Henrique Rossinoli, Feldberg, Eliana
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional do INPA
Texto Completo: https://repositorio.inpa.gov.br/handle/1/15939
Resumo: Fish of the family Cichlidae are recognized as an excellent model for evolutionary studies because of their morphological and behavioral adaptations to a wide diversity of explored ecological niches. In addition, the family has a dynamic genome with variable structure, composition and karyotype organization. Microsatellites represent the most dynamic genomic component and a better understanding of their organization may help clarify the role of repetitive DNA elements in the mechanisms of chromosomal evolution. Thus, in this study, microsatellite sequences were mapped in the chromosomes of Cichla monoculus Agassiz, 1831, Pterophyllum scalare Schultze, 1823, and Symphysodon discus Heckel, 1840. Four microsatellites demonstrated positive results in the genome of C. monoculus and S. discus, and five demonstrated positive results in the genome of P. scalare. In most cases, the microsatellite was dispersed in the chromosome with conspicuous markings in the centromeric or telomeric regions, which suggests that sequences contribute to chromosome structure and may have played a role in the evolution of this fish family. The comparative genome mapping data presented here provide novel information on the structure and organization of the repetitive DNA region of the cichlid genome and contribute to a better understanding of this fish family's genome. © Carlos Henrique Schneider et al.
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spelling Schneider, Carlos HenriqueGross, Maria ClaudiaTerêncio, Maria LeandraTavares, Édika Sabrina Girão Mitozo deMartins, Cesar Henrique RossinoliFeldberg, Eliana2020-05-20T19:08:47Z2020-05-20T19:08:47Z2015https://repositorio.inpa.gov.br/handle/1/1593910.3897/CompCytogen.v9i4.5582Fish of the family Cichlidae are recognized as an excellent model for evolutionary studies because of their morphological and behavioral adaptations to a wide diversity of explored ecological niches. In addition, the family has a dynamic genome with variable structure, composition and karyotype organization. Microsatellites represent the most dynamic genomic component and a better understanding of their organization may help clarify the role of repetitive DNA elements in the mechanisms of chromosomal evolution. Thus, in this study, microsatellite sequences were mapped in the chromosomes of Cichla monoculus Agassiz, 1831, Pterophyllum scalare Schultze, 1823, and Symphysodon discus Heckel, 1840. Four microsatellites demonstrated positive results in the genome of C. monoculus and S. discus, and five demonstrated positive results in the genome of P. scalare. In most cases, the microsatellite was dispersed in the chromosome with conspicuous markings in the centromeric or telomeric regions, which suggests that sequences contribute to chromosome structure and may have played a role in the evolution of this fish family. The comparative genome mapping data presented here provide novel information on the structure and organization of the repetitive DNA region of the cichlid genome and contribute to a better understanding of this fish family's genome. © Carlos Henrique Schneider et al.Volume 9, Número 4, Pags. 595-605Attribution-NonCommercial-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessChromosomal distribution of microsatellite repeats in Amazon cichlids genome (Pisces, Cichlidae)info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleComparative Cytogeneticsengreponame:Repositório Institucional do INPAinstname:Instituto Nacional de Pesquisas da Amazônia (INPA)instacron:INPAORIGINALartigo-inpa.pdfartigo-inpa.pdfapplication/pdf844051https://repositorio.inpa.gov.br/bitstream/1/15939/1/artigo-inpa.pdf84eb22209c94a9e5be3fea2398a1cda9MD511/159392020-05-20 15:42:58.325oai:repositorio:1/15939Repositório de PublicaçõesPUBhttps://repositorio.inpa.gov.br/oai/requestopendoar:2020-05-20T19:42:58Repositório Institucional do INPA - Instituto Nacional de Pesquisas da Amazônia (INPA)false
dc.title.en.fl_str_mv Chromosomal distribution of microsatellite repeats in Amazon cichlids genome (Pisces, Cichlidae)
title Chromosomal distribution of microsatellite repeats in Amazon cichlids genome (Pisces, Cichlidae)
spellingShingle Chromosomal distribution of microsatellite repeats in Amazon cichlids genome (Pisces, Cichlidae)
Schneider, Carlos Henrique
title_short Chromosomal distribution of microsatellite repeats in Amazon cichlids genome (Pisces, Cichlidae)
title_full Chromosomal distribution of microsatellite repeats in Amazon cichlids genome (Pisces, Cichlidae)
title_fullStr Chromosomal distribution of microsatellite repeats in Amazon cichlids genome (Pisces, Cichlidae)
title_full_unstemmed Chromosomal distribution of microsatellite repeats in Amazon cichlids genome (Pisces, Cichlidae)
title_sort Chromosomal distribution of microsatellite repeats in Amazon cichlids genome (Pisces, Cichlidae)
author Schneider, Carlos Henrique
author_facet Schneider, Carlos Henrique
Gross, Maria Claudia
Terêncio, Maria Leandra
Tavares, Édika Sabrina Girão Mitozo de
Martins, Cesar Henrique Rossinoli
Feldberg, Eliana
author_role author
author2 Gross, Maria Claudia
Terêncio, Maria Leandra
Tavares, Édika Sabrina Girão Mitozo de
Martins, Cesar Henrique Rossinoli
Feldberg, Eliana
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Schneider, Carlos Henrique
Gross, Maria Claudia
Terêncio, Maria Leandra
Tavares, Édika Sabrina Girão Mitozo de
Martins, Cesar Henrique Rossinoli
Feldberg, Eliana
description Fish of the family Cichlidae are recognized as an excellent model for evolutionary studies because of their morphological and behavioral adaptations to a wide diversity of explored ecological niches. In addition, the family has a dynamic genome with variable structure, composition and karyotype organization. Microsatellites represent the most dynamic genomic component and a better understanding of their organization may help clarify the role of repetitive DNA elements in the mechanisms of chromosomal evolution. Thus, in this study, microsatellite sequences were mapped in the chromosomes of Cichla monoculus Agassiz, 1831, Pterophyllum scalare Schultze, 1823, and Symphysodon discus Heckel, 1840. Four microsatellites demonstrated positive results in the genome of C. monoculus and S. discus, and five demonstrated positive results in the genome of P. scalare. In most cases, the microsatellite was dispersed in the chromosome with conspicuous markings in the centromeric or telomeric regions, which suggests that sequences contribute to chromosome structure and may have played a role in the evolution of this fish family. The comparative genome mapping data presented here provide novel information on the structure and organization of the repetitive DNA region of the cichlid genome and contribute to a better understanding of this fish family's genome. © Carlos Henrique Schneider et al.
publishDate 2015
dc.date.issued.fl_str_mv 2015
dc.date.accessioned.fl_str_mv 2020-05-20T19:08:47Z
dc.date.available.fl_str_mv 2020-05-20T19:08:47Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://repositorio.inpa.gov.br/handle/1/15939
dc.identifier.doi.none.fl_str_mv 10.3897/CompCytogen.v9i4.5582
url https://repositorio.inpa.gov.br/handle/1/15939
identifier_str_mv 10.3897/CompCytogen.v9i4.5582
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartof.pt_BR.fl_str_mv Volume 9, Número 4, Pags. 595-605
dc.rights.driver.fl_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Comparative Cytogenetics
publisher.none.fl_str_mv Comparative Cytogenetics
dc.source.none.fl_str_mv reponame:Repositório Institucional do INPA
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instacron:INPA
instname_str Instituto Nacional de Pesquisas da Amazônia (INPA)
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reponame_str Repositório Institucional do INPA
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bitstream.url.fl_str_mv https://repositorio.inpa.gov.br/bitstream/1/15939/1/artigo-inpa.pdf
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repository.name.fl_str_mv Repositório Institucional do INPA - Instituto Nacional de Pesquisas da Amazônia (INPA)
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