Identification of Chromobacterium violaceum genes with potential biotechnological application in environmental detoxification

Detalhes bibliográficos
Autor(a) principal: Carepo, Marta S.P.
Data de Publicação: 2004
Outros Autores: Azevedo, Juliana Simão Nina de, Porto, Jorge Ivan Rebelo, Bentes-Sousa, Alexandra R., Batista, Jacqueline da Silva, Silva, Artur L.C. da, Schneider, Maria Paula Cruz
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional do INPA
Texto Completo: https://repositorio.inpa.gov.br/handle/1/15015
Resumo: Chromobacterium violaceum is a Gram-negative bacterium found in a wide variety of tropical and subtropical ecosystems. The complete genome sequence of C. violaceum ATCC 12472 is now available, and it has considerable biotechnological potential for various applications, such as environmental detoxification, as well as medical and agricultural use. We examined the biotechnological potential of C. violaceum for environmental detoxification. Three operons, comprising the ars operon, involved in arsenic resistance, the cyn operon, involved in cyanate detoxification, and the hcn operon, encoding a cyanase, responsible for biogenic production of cyanide, as well as an open reading frame, encoding an acid dehalogenase, were analyzed in detail. Probable catalytic mechanisms for the enzymes were determined, based on amino acid sequence comparisons and on published structural information for these types of proteins.
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spelling Carepo, Marta S.P.Azevedo, Juliana Simão Nina dePorto, Jorge Ivan RebeloBentes-Sousa, Alexandra R.Batista, Jacqueline da SilvaSilva, Artur L.C. daSchneider, Maria Paula Cruz2020-05-07T14:00:35Z2020-05-07T14:00:35Z2004https://repositorio.inpa.gov.br/handle/1/15015Chromobacterium violaceum is a Gram-negative bacterium found in a wide variety of tropical and subtropical ecosystems. The complete genome sequence of C. violaceum ATCC 12472 is now available, and it has considerable biotechnological potential for various applications, such as environmental detoxification, as well as medical and agricultural use. We examined the biotechnological potential of C. violaceum for environmental detoxification. Three operons, comprising the ars operon, involved in arsenic resistance, the cyn operon, involved in cyanate detoxification, and the hcn operon, encoding a cyanase, responsible for biogenic production of cyanide, as well as an open reading frame, encoding an acid dehalogenase, were analyzed in detail. Probable catalytic mechanisms for the enzymes were determined, based on amino acid sequence comparisons and on published structural information for these types of proteins.Volume 3, Número 1, Pags. 181-194Attribution-NonCommercial-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessAcid DehalogenaseArsenicBacterial EnzymeCyanate HydrolaseCyanideGoldHaloacidUnclassified Drug2 Haloacid Dehalogenase2 Haloacid DehalogenaseArsenicBacterial ProteinHydrolaseAmino Acid SequenceArs OperonBacterial GeneBiotechnologyCatalysisChromobacteriumChromobacterium ViolaceumConference PaperCyn OperonDegradation KineticsDehalogenationDetoxificationEnvironmental SanitationGene IdentificationHcn OperonNonhumanOpen Reading FrameOperonPollution ControlSequence AnalysisAntibiotic ResistanceBioremediationBiotechnologyGeneticsMetabolismMolecular GeneticsNucleotide SequenceBacteria (microorganisms)ChromobacteriumChromobacterium ViolaceumChromobacterium Violaceum Atcc 12472NegibacteriaArsenicBacterial ProteinsBase SequenceBiodegradation, EnvironmentalBiotechnologyChromobacteriumCyanidesDrug Resistance, BacterialHydrolasesMolecular Sequence DataOpen Reading FramesOperonIdentification of Chromobacterium violaceum genes with potential biotechnological application in environmental detoxificationinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Researchengreponame:Repositório Institucional do INPAinstname:Instituto Nacional de Pesquisas da Amazônia (INPA)instacron:INPAORIGINALartigo-inpa.pdfapplication/pdf527016https://repositorio.inpa.gov.br/bitstream/1/15015/1/artigo-inpa.pdf328474d7cf3bbf8d6732d502be3f29fdMD51CC-LICENSElicense_rdfapplication/octet-stream914https://repositorio.inpa.gov.br/bitstream/1/15015/2/license_rdf4d2950bda3d176f570a9f8b328dfbbefMD521/150152020-07-14 10:30:52.67oai:repositorio:1/15015Repositório de PublicaçõesPUBhttps://repositorio.inpa.gov.br/oai/requestopendoar:2020-07-14T14:30:52Repositório Institucional do INPA - Instituto Nacional de Pesquisas da Amazônia (INPA)false
dc.title.en.fl_str_mv Identification of Chromobacterium violaceum genes with potential biotechnological application in environmental detoxification
title Identification of Chromobacterium violaceum genes with potential biotechnological application in environmental detoxification
spellingShingle Identification of Chromobacterium violaceum genes with potential biotechnological application in environmental detoxification
Carepo, Marta S.P.
Acid Dehalogenase
Arsenic
Bacterial Enzyme
Cyanate Hydrolase
Cyanide
Gold
Haloacid
Unclassified Drug
2 Haloacid Dehalogenase
2 Haloacid Dehalogenase
Arsenic
Bacterial Protein
Hydrolase
Amino Acid Sequence
Ars Operon
Bacterial Gene
Biotechnology
Catalysis
Chromobacterium
Chromobacterium Violaceum
Conference Paper
Cyn Operon
Degradation Kinetics
Dehalogenation
Detoxification
Environmental Sanitation
Gene Identification
Hcn Operon
Nonhuman
Open Reading Frame
Operon
Pollution Control
Sequence Analysis
Antibiotic Resistance
Bioremediation
Biotechnology
Genetics
Metabolism
Molecular Genetics
Nucleotide Sequence
Bacteria (microorganisms)
Chromobacterium
Chromobacterium Violaceum
Chromobacterium Violaceum Atcc 12472
Negibacteria
Arsenic
Bacterial Proteins
Base Sequence
Biodegradation, Environmental
Biotechnology
Chromobacterium
Cyanides
Drug Resistance, Bacterial
Hydrolases
Molecular Sequence Data
Open Reading Frames
Operon
title_short Identification of Chromobacterium violaceum genes with potential biotechnological application in environmental detoxification
title_full Identification of Chromobacterium violaceum genes with potential biotechnological application in environmental detoxification
title_fullStr Identification of Chromobacterium violaceum genes with potential biotechnological application in environmental detoxification
title_full_unstemmed Identification of Chromobacterium violaceum genes with potential biotechnological application in environmental detoxification
title_sort Identification of Chromobacterium violaceum genes with potential biotechnological application in environmental detoxification
author Carepo, Marta S.P.
author_facet Carepo, Marta S.P.
Azevedo, Juliana Simão Nina de
Porto, Jorge Ivan Rebelo
Bentes-Sousa, Alexandra R.
Batista, Jacqueline da Silva
Silva, Artur L.C. da
Schneider, Maria Paula Cruz
author_role author
author2 Azevedo, Juliana Simão Nina de
Porto, Jorge Ivan Rebelo
Bentes-Sousa, Alexandra R.
Batista, Jacqueline da Silva
Silva, Artur L.C. da
Schneider, Maria Paula Cruz
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Carepo, Marta S.P.
Azevedo, Juliana Simão Nina de
Porto, Jorge Ivan Rebelo
Bentes-Sousa, Alexandra R.
Batista, Jacqueline da Silva
Silva, Artur L.C. da
Schneider, Maria Paula Cruz
dc.subject.eng.fl_str_mv Acid Dehalogenase
Arsenic
Bacterial Enzyme
Cyanate Hydrolase
Cyanide
Gold
Haloacid
Unclassified Drug
2 Haloacid Dehalogenase
2 Haloacid Dehalogenase
Arsenic
Bacterial Protein
Hydrolase
Amino Acid Sequence
Ars Operon
Bacterial Gene
Biotechnology
Catalysis
Chromobacterium
Chromobacterium Violaceum
Conference Paper
Cyn Operon
Degradation Kinetics
Dehalogenation
Detoxification
Environmental Sanitation
Gene Identification
Hcn Operon
Nonhuman
Open Reading Frame
Operon
Pollution Control
Sequence Analysis
Antibiotic Resistance
Bioremediation
Biotechnology
Genetics
Metabolism
Molecular Genetics
Nucleotide Sequence
Bacteria (microorganisms)
Chromobacterium
Chromobacterium Violaceum
Chromobacterium Violaceum Atcc 12472
Negibacteria
Arsenic
Bacterial Proteins
Base Sequence
Biodegradation, Environmental
Biotechnology
Chromobacterium
Cyanides
Drug Resistance, Bacterial
Hydrolases
Molecular Sequence Data
Open Reading Frames
Operon
topic Acid Dehalogenase
Arsenic
Bacterial Enzyme
Cyanate Hydrolase
Cyanide
Gold
Haloacid
Unclassified Drug
2 Haloacid Dehalogenase
2 Haloacid Dehalogenase
Arsenic
Bacterial Protein
Hydrolase
Amino Acid Sequence
Ars Operon
Bacterial Gene
Biotechnology
Catalysis
Chromobacterium
Chromobacterium Violaceum
Conference Paper
Cyn Operon
Degradation Kinetics
Dehalogenation
Detoxification
Environmental Sanitation
Gene Identification
Hcn Operon
Nonhuman
Open Reading Frame
Operon
Pollution Control
Sequence Analysis
Antibiotic Resistance
Bioremediation
Biotechnology
Genetics
Metabolism
Molecular Genetics
Nucleotide Sequence
Bacteria (microorganisms)
Chromobacterium
Chromobacterium Violaceum
Chromobacterium Violaceum Atcc 12472
Negibacteria
Arsenic
Bacterial Proteins
Base Sequence
Biodegradation, Environmental
Biotechnology
Chromobacterium
Cyanides
Drug Resistance, Bacterial
Hydrolases
Molecular Sequence Data
Open Reading Frames
Operon
description Chromobacterium violaceum is a Gram-negative bacterium found in a wide variety of tropical and subtropical ecosystems. The complete genome sequence of C. violaceum ATCC 12472 is now available, and it has considerable biotechnological potential for various applications, such as environmental detoxification, as well as medical and agricultural use. We examined the biotechnological potential of C. violaceum for environmental detoxification. Three operons, comprising the ars operon, involved in arsenic resistance, the cyn operon, involved in cyanate detoxification, and the hcn operon, encoding a cyanase, responsible for biogenic production of cyanide, as well as an open reading frame, encoding an acid dehalogenase, were analyzed in detail. Probable catalytic mechanisms for the enzymes were determined, based on amino acid sequence comparisons and on published structural information for these types of proteins.
publishDate 2004
dc.date.issued.fl_str_mv 2004
dc.date.accessioned.fl_str_mv 2020-05-07T14:00:35Z
dc.date.available.fl_str_mv 2020-05-07T14:00:35Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://repositorio.inpa.gov.br/handle/1/15015
url https://repositorio.inpa.gov.br/handle/1/15015
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartof.pt_BR.fl_str_mv Volume 3, Número 1, Pags. 181-194
dc.rights.driver.fl_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Genetics and Molecular Research
publisher.none.fl_str_mv Genetics and Molecular Research
dc.source.none.fl_str_mv reponame:Repositório Institucional do INPA
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reponame_str Repositório Institucional do INPA
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