Looking for a needle in a haystack: inference about individual fitness components in a heterogeneous population

Detalhes bibliográficos
Autor(a) principal: Cam, Emmanuelle
Data de Publicação: 2012
Outros Autores: Gimenez, Olivier, Alpizar-Jara, Russell, Aubry, Lise M., Authier, Matthieu, Cooch, Evan G., Koons, David N., Link, William A., Monnat, Jean-Yves, Nichols, James D., Rotella, Jay J., Royle, Jeffrey A., Pradel, Roger
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10174/7314
https://doi.org/10.1111/j.1600-0706.2012.20532.x
Resumo: Studies of wild vertebrates have provided evidence of substantial differences in lifetime reproduction among individuals and the sequences of life history ‘states’ during life (breeding, nonbreeding, etc.). Such differences may reflect ‘fixed’ differences in fitness components among individuals determined before, or at the onset of reproductive life. Many retrospective life history studies have translated this idea by assuming a ‘latent’ unobserved heterogeneity resulting in a fixed hierarchy among individuals in fitness components. Alternatively, fixed differences among individuals are not necessarily needed to account for observed levels of individual heterogeneity in life histories. Individuals with identical fitness traits may stochastically experience different outcomes for breeding and survival through life that lead to a diversity of ‘state’ sequences with some individuals living longer and being more productive than others, by chance alone. The question is whether individuals differ in their underlying fitness components in ways that cannot be explained by observable ‘states’ such as age, previous breeding success, etc. Here, we compare statistical models that represent these opposing hypotheses, and mixtures of them, using data from kittiwakes. We constructed models that accounted for observed covariates, individual random effects (unobserved heterogeneity), first-order Markovian transitions between observed states, or combinations of these features. We show that individual sequences of states are better accounted for by models incorporating unobserved heterogeneity than by models including first-order Markov processes alone, or a combination of both. If we had not considered individual heterogeneity, models including Markovian transitions would have been the best performing ones. We also show that inference about age-related changes in fitness components is sensitive to incorporation of underlying individual heterogeneity in models. Our approach provides insight into the sources of individual heterogeneity in life histories, and can be applied to other data sets to examine the ubiquity of our results across the tree of life.
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spelling Looking for a needle in a haystack: inference about individual fitness components in a heterogeneous populationBayesian estimationheterogeneityStudies of wild vertebrates have provided evidence of substantial differences in lifetime reproduction among individuals and the sequences of life history ‘states’ during life (breeding, nonbreeding, etc.). Such differences may reflect ‘fixed’ differences in fitness components among individuals determined before, or at the onset of reproductive life. Many retrospective life history studies have translated this idea by assuming a ‘latent’ unobserved heterogeneity resulting in a fixed hierarchy among individuals in fitness components. Alternatively, fixed differences among individuals are not necessarily needed to account for observed levels of individual heterogeneity in life histories. Individuals with identical fitness traits may stochastically experience different outcomes for breeding and survival through life that lead to a diversity of ‘state’ sequences with some individuals living longer and being more productive than others, by chance alone. The question is whether individuals differ in their underlying fitness components in ways that cannot be explained by observable ‘states’ such as age, previous breeding success, etc. Here, we compare statistical models that represent these opposing hypotheses, and mixtures of them, using data from kittiwakes. We constructed models that accounted for observed covariates, individual random effects (unobserved heterogeneity), first-order Markovian transitions between observed states, or combinations of these features. We show that individual sequences of states are better accounted for by models incorporating unobserved heterogeneity than by models including first-order Markov processes alone, or a combination of both. If we had not considered individual heterogeneity, models including Markovian transitions would have been the best performing ones. We also show that inference about age-related changes in fitness components is sensitive to incorporation of underlying individual heterogeneity in models. Our approach provides insight into the sources of individual heterogeneity in life histories, and can be applied to other data sets to examine the ubiquity of our results across the tree of life.Wiley-Blackwell2013-01-15T16:47:40Z2013-01-152012-09-11T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10174/7314http://hdl.handle.net/10174/7314https://doi.org/10.1111/j.1600-0706.2012.20532.xengCam, E., Gimenez, O., Alpizar-Jara, R., Aubry, L. M., Authier, M., Cooch, E. G., Koons, D. N., Link, W. A., Monnat, J.-Y., Nichols, J. D., Rotella, J. J., Royle, J. A. and Pradel, R. (2012), Looking for a needle in a haystack: inference about individual fitness components in a heterogeneous population. Oikos. doi: 10.1111/j.1600- 0706.2012.20532.x0030-1299; 1600-0706ndndalpizar@uevora.ptndndndndndndndndndnd336Cam, EmmanuelleGimenez, OlivierAlpizar-Jara, RussellAubry, Lise M.Authier, MatthieuCooch, Evan G.Koons, David N.Link, William A.Monnat, Jean-YvesNichols, James D.Rotella, Jay J.Royle, Jeffrey A.Pradel, Rogerinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-01-03T18:47:32Zoai:dspace.uevora.pt:10174/7314Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T01:01:54.214153Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Looking for a needle in a haystack: inference about individual fitness components in a heterogeneous population
title Looking for a needle in a haystack: inference about individual fitness components in a heterogeneous population
spellingShingle Looking for a needle in a haystack: inference about individual fitness components in a heterogeneous population
Cam, Emmanuelle
Bayesian estimation
heterogeneity
title_short Looking for a needle in a haystack: inference about individual fitness components in a heterogeneous population
title_full Looking for a needle in a haystack: inference about individual fitness components in a heterogeneous population
title_fullStr Looking for a needle in a haystack: inference about individual fitness components in a heterogeneous population
title_full_unstemmed Looking for a needle in a haystack: inference about individual fitness components in a heterogeneous population
title_sort Looking for a needle in a haystack: inference about individual fitness components in a heterogeneous population
author Cam, Emmanuelle
author_facet Cam, Emmanuelle
Gimenez, Olivier
Alpizar-Jara, Russell
Aubry, Lise M.
Authier, Matthieu
Cooch, Evan G.
Koons, David N.
Link, William A.
Monnat, Jean-Yves
Nichols, James D.
Rotella, Jay J.
Royle, Jeffrey A.
Pradel, Roger
author_role author
author2 Gimenez, Olivier
Alpizar-Jara, Russell
Aubry, Lise M.
Authier, Matthieu
Cooch, Evan G.
Koons, David N.
Link, William A.
Monnat, Jean-Yves
Nichols, James D.
Rotella, Jay J.
Royle, Jeffrey A.
Pradel, Roger
author2_role author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Cam, Emmanuelle
Gimenez, Olivier
Alpizar-Jara, Russell
Aubry, Lise M.
Authier, Matthieu
Cooch, Evan G.
Koons, David N.
Link, William A.
Monnat, Jean-Yves
Nichols, James D.
Rotella, Jay J.
Royle, Jeffrey A.
Pradel, Roger
dc.subject.por.fl_str_mv Bayesian estimation
heterogeneity
topic Bayesian estimation
heterogeneity
description Studies of wild vertebrates have provided evidence of substantial differences in lifetime reproduction among individuals and the sequences of life history ‘states’ during life (breeding, nonbreeding, etc.). Such differences may reflect ‘fixed’ differences in fitness components among individuals determined before, or at the onset of reproductive life. Many retrospective life history studies have translated this idea by assuming a ‘latent’ unobserved heterogeneity resulting in a fixed hierarchy among individuals in fitness components. Alternatively, fixed differences among individuals are not necessarily needed to account for observed levels of individual heterogeneity in life histories. Individuals with identical fitness traits may stochastically experience different outcomes for breeding and survival through life that lead to a diversity of ‘state’ sequences with some individuals living longer and being more productive than others, by chance alone. The question is whether individuals differ in their underlying fitness components in ways that cannot be explained by observable ‘states’ such as age, previous breeding success, etc. Here, we compare statistical models that represent these opposing hypotheses, and mixtures of them, using data from kittiwakes. We constructed models that accounted for observed covariates, individual random effects (unobserved heterogeneity), first-order Markovian transitions between observed states, or combinations of these features. We show that individual sequences of states are better accounted for by models incorporating unobserved heterogeneity than by models including first-order Markov processes alone, or a combination of both. If we had not considered individual heterogeneity, models including Markovian transitions would have been the best performing ones. We also show that inference about age-related changes in fitness components is sensitive to incorporation of underlying individual heterogeneity in models. Our approach provides insight into the sources of individual heterogeneity in life histories, and can be applied to other data sets to examine the ubiquity of our results across the tree of life.
publishDate 2012
dc.date.none.fl_str_mv 2012-09-11T00:00:00Z
2013-01-15T16:47:40Z
2013-01-15
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10174/7314
http://hdl.handle.net/10174/7314
https://doi.org/10.1111/j.1600-0706.2012.20532.x
url http://hdl.handle.net/10174/7314
https://doi.org/10.1111/j.1600-0706.2012.20532.x
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Cam, E., Gimenez, O., Alpizar-Jara, R., Aubry, L. M., Authier, M., Cooch, E. G., Koons, D. N., Link, W. A., Monnat, J.-Y., Nichols, J. D., Rotella, J. J., Royle, J. A. and Pradel, R. (2012), Looking for a needle in a haystack: inference about individual fitness components in a heterogeneous population. Oikos. doi: 10.1111/j.1600- 0706.2012.20532.x
0030-1299; 1600-0706
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alpizar@uevora.pt
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336
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dc.publisher.none.fl_str_mv Wiley-Blackwell
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