Application of MALDI-TOF MS for requalification of a Candida clinical isolates culture collection

Detalhes bibliográficos
Autor(a) principal: Lima-Neto, Reginaldo
Data de Publicação: 2014
Outros Autores: Santos, Cledir, Lima, Nelson, Sampaio, Paula, Pais, Célia, Neves, Rejane P.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/1822/31883
Resumo: Microbial culture collections underpin biotechnology applications and are important resources for clinical microbiology by supplying reference strains and/or performing microbial identifications as a service. Proteomic profiles by MALDI-TOF MS have been used for Candida spp. identification in clinical laboratories and demonstrated to be a fast and reliable technique for the routine identification of pathogenic yeasts. The main aim of this study was to apply MALDI-TOF MS combined with classical phenotypic and molecular approaches to identify Candida clinical isolates preserved from 1 up to 52 years in a Brazilian culture collection and assess its value for the identification of yeasts preserved in this type of collections. Forty Candida spp. clinical isolates were identified by morphological and biochemical analyses. Identifications were also performed by the new proteomic approach based on MALDI-TOF MS. Results demonstrated 15% discordance when compared with morphological and biochemical analyses. Discordant isolates were analysed by ITS sequencing, which confirmed the MALDI-TOF MS identifications and these strains were renamed in the culture collection catalogue. In conclusion, proteomic profiles by MALDI-TOF MS represents a rapid and reliable method for identifying clinical Candida species preserved in culture collections and may present clear benefits when compared with the performance of existing daily routine methods applied at health centres and hospitals.
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spelling Application of MALDI-TOF MS for requalification of a Candida clinical isolates culture collectionBRCsCandidaClinical yeastsCulture collectionsMALDI-TOF MSScience & TechnologyMicrobial culture collections underpin biotechnology applications and are important resources for clinical microbiology by supplying reference strains and/or performing microbial identifications as a service. Proteomic profiles by MALDI-TOF MS have been used for Candida spp. identification in clinical laboratories and demonstrated to be a fast and reliable technique for the routine identification of pathogenic yeasts. The main aim of this study was to apply MALDI-TOF MS combined with classical phenotypic and molecular approaches to identify Candida clinical isolates preserved from 1 up to 52 years in a Brazilian culture collection and assess its value for the identification of yeasts preserved in this type of collections. Forty Candida spp. clinical isolates were identified by morphological and biochemical analyses. Identifications were also performed by the new proteomic approach based on MALDI-TOF MS. Results demonstrated 15% discordance when compared with morphological and biochemical analyses. Discordant isolates were analysed by ITS sequencing, which confirmed the MALDI-TOF MS identifications and these strains were renamed in the culture collection catalogue. In conclusion, proteomic profiles by MALDI-TOF MS represents a rapid and reliable method for identifying clinical Candida species preserved in culture collections and may present clear benefits when compared with the performance of existing daily routine methods applied at health centres and hospitals.Research leading to these results received partial funding from the European Community's Seventh Framework Program (FP7, 2007-2013), Research Infrastructures Action, under grant agreement No. FP7-228310 (EMbaRC project). Thanks are also due to Coordenacao de Aperfeicoamento de Pessoal de Nivel Superior (CAPES, Brazil) for funding supportSociedade Brasileira de MicrobiologiaUniversidade do MinhoLima-Neto, ReginaldoSantos, CledirLima, NelsonSampaio, PaulaPais, CéliaNeves, Rejane P.20142014-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/31883eng1517-838210.1590/S1517-8382201400500004425242936info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:51:56Zoai:repositorium.sdum.uminho.pt:1822/31883Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:50:58.183964Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Application of MALDI-TOF MS for requalification of a Candida clinical isolates culture collection
title Application of MALDI-TOF MS for requalification of a Candida clinical isolates culture collection
spellingShingle Application of MALDI-TOF MS for requalification of a Candida clinical isolates culture collection
Lima-Neto, Reginaldo
BRCs
Candida
Clinical yeasts
Culture collections
MALDI-TOF MS
Science & Technology
title_short Application of MALDI-TOF MS for requalification of a Candida clinical isolates culture collection
title_full Application of MALDI-TOF MS for requalification of a Candida clinical isolates culture collection
title_fullStr Application of MALDI-TOF MS for requalification of a Candida clinical isolates culture collection
title_full_unstemmed Application of MALDI-TOF MS for requalification of a Candida clinical isolates culture collection
title_sort Application of MALDI-TOF MS for requalification of a Candida clinical isolates culture collection
author Lima-Neto, Reginaldo
author_facet Lima-Neto, Reginaldo
Santos, Cledir
Lima, Nelson
Sampaio, Paula
Pais, Célia
Neves, Rejane P.
author_role author
author2 Santos, Cledir
Lima, Nelson
Sampaio, Paula
Pais, Célia
Neves, Rejane P.
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Lima-Neto, Reginaldo
Santos, Cledir
Lima, Nelson
Sampaio, Paula
Pais, Célia
Neves, Rejane P.
dc.subject.por.fl_str_mv BRCs
Candida
Clinical yeasts
Culture collections
MALDI-TOF MS
Science & Technology
topic BRCs
Candida
Clinical yeasts
Culture collections
MALDI-TOF MS
Science & Technology
description Microbial culture collections underpin biotechnology applications and are important resources for clinical microbiology by supplying reference strains and/or performing microbial identifications as a service. Proteomic profiles by MALDI-TOF MS have been used for Candida spp. identification in clinical laboratories and demonstrated to be a fast and reliable technique for the routine identification of pathogenic yeasts. The main aim of this study was to apply MALDI-TOF MS combined with classical phenotypic and molecular approaches to identify Candida clinical isolates preserved from 1 up to 52 years in a Brazilian culture collection and assess its value for the identification of yeasts preserved in this type of collections. Forty Candida spp. clinical isolates were identified by morphological and biochemical analyses. Identifications were also performed by the new proteomic approach based on MALDI-TOF MS. Results demonstrated 15% discordance when compared with morphological and biochemical analyses. Discordant isolates were analysed by ITS sequencing, which confirmed the MALDI-TOF MS identifications and these strains were renamed in the culture collection catalogue. In conclusion, proteomic profiles by MALDI-TOF MS represents a rapid and reliable method for identifying clinical Candida species preserved in culture collections and may present clear benefits when compared with the performance of existing daily routine methods applied at health centres and hospitals.
publishDate 2014
dc.date.none.fl_str_mv 2014
2014-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1822/31883
url http://hdl.handle.net/1822/31883
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1517-8382
10.1590/S1517-83822014005000044
25242936
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eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Sociedade Brasileira de Microbiologia
publisher.none.fl_str_mv Sociedade Brasileira de Microbiologia
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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