Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows

Detalhes bibliográficos
Autor(a) principal: Pereira, Telma
Data de Publicação: 2013
Outros Autores: Lemos, Luis, Cardoso, Sandra, Silva, Dina, Rodrigues, Ana, Santana, Isabel, de Mendonca, Alexandre, Guerreiro, Manuela, Madeira, Sara C.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.1/11608
Resumo: Background: Predicting progression from a stage of Mild Cognitive Impairment to dementia is a major pursuit in current research. It is broadly accepted that cognition declines with a continuum between MCI and dementia. As such, cohorts of MCI patients are usually heterogeneous, containing patients at different stages of the neurodegenerative process. This hampers the prognostic task. Nevertheless, when learning prognostic models, most studies use the entire cohort of MCI patients regardless of their disease stages. In this paper, we propose a Time Windows approach to predict conversion to dementia, learning with patients stratified using time windows, thus fine-tuning the prognosis regarding the time to conversion. Methods: In the proposed Time Windows approach, we grouped patients based on the clinical information of whether they converted (converter MCI) or remained MCI (stable MCI) within a specific time window. We tested time windows of 2, 3, 4 and 5 years. We developed a prognostic model for each time window using clinical and neuropsychological data and compared this approach with the commonly used in the literature, where all patients are used to learn the models, named as First Last approach. This enables to move from the traditional question "Will a MCI patient convert to dementia somewhere in the future" to the question "Will a MCI patient convert to dementia in a specific time window". Results: The proposed Time Windows approach outperformed the First Last approach. The results showed that we can predict conversion to dementia as early as 5 years before the event with an AUC of 0.88 in the cross-validation set and 0.76 in an independent validation set. Conclusions: Prognostic models using time windows have higher performance when predicting progression from MCI to dementia, when compared to the prognostic approach commonly used in the literature. Furthermore, the proposed Time Windows approach is more relevant from a clinical point of view, predicting conversion within a temporal interval rather than sometime in the future and allowing clinicians to timely adjust treatments and clinical appointments.
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spelling Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windowsAlzheimers DiseaseConversionDiagnosisRecommendationsClassificationCriteriaTestsRatesMciBackground: Predicting progression from a stage of Mild Cognitive Impairment to dementia is a major pursuit in current research. It is broadly accepted that cognition declines with a continuum between MCI and dementia. As such, cohorts of MCI patients are usually heterogeneous, containing patients at different stages of the neurodegenerative process. This hampers the prognostic task. Nevertheless, when learning prognostic models, most studies use the entire cohort of MCI patients regardless of their disease stages. In this paper, we propose a Time Windows approach to predict conversion to dementia, learning with patients stratified using time windows, thus fine-tuning the prognosis regarding the time to conversion. Methods: In the proposed Time Windows approach, we grouped patients based on the clinical information of whether they converted (converter MCI) or remained MCI (stable MCI) within a specific time window. We tested time windows of 2, 3, 4 and 5 years. We developed a prognostic model for each time window using clinical and neuropsychological data and compared this approach with the commonly used in the literature, where all patients are used to learn the models, named as First Last approach. This enables to move from the traditional question "Will a MCI patient convert to dementia somewhere in the future" to the question "Will a MCI patient convert to dementia in a specific time window". Results: The proposed Time Windows approach outperformed the First Last approach. The results showed that we can predict conversion to dementia as early as 5 years before the event with an AUC of 0.88 in the cross-validation set and 0.76 in an independent validation set. Conclusions: Prognostic models using time windows have higher performance when predicting progression from MCI to dementia, when compared to the prognostic approach commonly used in the literature. Furthermore, the proposed Time Windows approach is more relevant from a clinical point of view, predicting conversion within a temporal interval rather than sometime in the future and allowing clinicians to timely adjust treatments and clinical appointments.FCT under the Neuroclinomics2 project [PTDC/EEI-SII/1937/2014, SFRH/BD/95846/2013]; INESC-ID plurianual [UID/CEC/50021/2013]; LASIGE Research Unit [UID/CEC/00408/2013]Biomed Central LtdSapientiaPereira, TelmaLemos, LuisCardoso, SandraSilva, DinaRodrigues, AnaSantana, Isabelde Mendonca, AlexandreGuerreiro, ManuelaMadeira, Sara C.2018-12-07T14:53:38Z2013-032013-03-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.1/11608eng1472-694710.1186/s12911-017-0497-2info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-24T10:23:27Zoai:sapientia.ualg.pt:10400.1/11608Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:03:05.577617Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows
title Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows
spellingShingle Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows
Pereira, Telma
Alzheimers Disease
Conversion
Diagnosis
Recommendations
Classification
Criteria
Tests
Rates
Mci
title_short Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows
title_full Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows
title_fullStr Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows
title_full_unstemmed Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows
title_sort Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows
author Pereira, Telma
author_facet Pereira, Telma
Lemos, Luis
Cardoso, Sandra
Silva, Dina
Rodrigues, Ana
Santana, Isabel
de Mendonca, Alexandre
Guerreiro, Manuela
Madeira, Sara C.
author_role author
author2 Lemos, Luis
Cardoso, Sandra
Silva, Dina
Rodrigues, Ana
Santana, Isabel
de Mendonca, Alexandre
Guerreiro, Manuela
Madeira, Sara C.
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Sapientia
dc.contributor.author.fl_str_mv Pereira, Telma
Lemos, Luis
Cardoso, Sandra
Silva, Dina
Rodrigues, Ana
Santana, Isabel
de Mendonca, Alexandre
Guerreiro, Manuela
Madeira, Sara C.
dc.subject.por.fl_str_mv Alzheimers Disease
Conversion
Diagnosis
Recommendations
Classification
Criteria
Tests
Rates
Mci
topic Alzheimers Disease
Conversion
Diagnosis
Recommendations
Classification
Criteria
Tests
Rates
Mci
description Background: Predicting progression from a stage of Mild Cognitive Impairment to dementia is a major pursuit in current research. It is broadly accepted that cognition declines with a continuum between MCI and dementia. As such, cohorts of MCI patients are usually heterogeneous, containing patients at different stages of the neurodegenerative process. This hampers the prognostic task. Nevertheless, when learning prognostic models, most studies use the entire cohort of MCI patients regardless of their disease stages. In this paper, we propose a Time Windows approach to predict conversion to dementia, learning with patients stratified using time windows, thus fine-tuning the prognosis regarding the time to conversion. Methods: In the proposed Time Windows approach, we grouped patients based on the clinical information of whether they converted (converter MCI) or remained MCI (stable MCI) within a specific time window. We tested time windows of 2, 3, 4 and 5 years. We developed a prognostic model for each time window using clinical and neuropsychological data and compared this approach with the commonly used in the literature, where all patients are used to learn the models, named as First Last approach. This enables to move from the traditional question "Will a MCI patient convert to dementia somewhere in the future" to the question "Will a MCI patient convert to dementia in a specific time window". Results: The proposed Time Windows approach outperformed the First Last approach. The results showed that we can predict conversion to dementia as early as 5 years before the event with an AUC of 0.88 in the cross-validation set and 0.76 in an independent validation set. Conclusions: Prognostic models using time windows have higher performance when predicting progression from MCI to dementia, when compared to the prognostic approach commonly used in the literature. Furthermore, the proposed Time Windows approach is more relevant from a clinical point of view, predicting conversion within a temporal interval rather than sometime in the future and allowing clinicians to timely adjust treatments and clinical appointments.
publishDate 2013
dc.date.none.fl_str_mv 2013-03
2013-03-01T00:00:00Z
2018-12-07T14:53:38Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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url http://hdl.handle.net/10400.1/11608
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1472-6947
10.1186/s12911-017-0497-2
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dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Biomed Central Ltd
publisher.none.fl_str_mv Biomed Central Ltd
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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