Development of a novel peptide nucleic acid probe for the detection of Legionella spp. in water samples
Autor(a) principal: | |
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Data de Publicação: | 2022 |
Outros Autores: | , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | https://hdl.handle.net/1822/78872 |
Resumo: | Legionella are opportunistic intracellular pathogens that are found throughout the environment. The Legionella contamination of water systems represents a serious social problem that can lead to severe diseases, which can manifest as both Pontiac fever and Legionnaires’ disease (LD) infections. Fluorescence in situ hybridization using nucleic acid mimic probes (NAM-FISH) is a powerful and versatile technique for bacterial detection. By optimizing a peptide nucleic acid (PNA) sequence based on fluorescently selective binding to specific bacterial rRNA sequences, we established a new PNA-FISH method that has been successfully designed for the specific detection of the genus Legionella. The LEG22 PNA probe has shown great theoretical performance, presenting 99.9% specificity and 96.9% sensitivity. We also demonstrated that the PNA-FISH approach presents a good signal-to-noise ratio when applied in artificially contaminated water samples directly on filtration membranes or after cells elution. For water samples with higher turbidity (from cooling tower water systems), there is still the need for further method optimization in order to detect cellular contents and to overcome interferents’ autofluorescence, which hinders probe signal visualization. Nevertheless, this work shows that the PNA-FISH approach could be a promising alternative for the rapid (3–4 h) and accurate detection of Legionella. |
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Development of a novel peptide nucleic acid probe for the detection of Legionella spp. in water samplesfluorescence in situ hybridizationLegionella sp.peptide nucleic acid (PNA)16S rRNA genewaterborne detectionScience & TechnologyLegionella are opportunistic intracellular pathogens that are found throughout the environment. The Legionella contamination of water systems represents a serious social problem that can lead to severe diseases, which can manifest as both Pontiac fever and Legionnaires’ disease (LD) infections. Fluorescence in situ hybridization using nucleic acid mimic probes (NAM-FISH) is a powerful and versatile technique for bacterial detection. By optimizing a peptide nucleic acid (PNA) sequence based on fluorescently selective binding to specific bacterial rRNA sequences, we established a new PNA-FISH method that has been successfully designed for the specific detection of the genus Legionella. The LEG22 PNA probe has shown great theoretical performance, presenting 99.9% specificity and 96.9% sensitivity. We also demonstrated that the PNA-FISH approach presents a good signal-to-noise ratio when applied in artificially contaminated water samples directly on filtration membranes or after cells elution. For water samples with higher turbidity (from cooling tower water systems), there is still the need for further method optimization in order to detect cellular contents and to overcome interferents’ autofluorescence, which hinders probe signal visualization. Nevertheless, this work shows that the PNA-FISH approach could be a promising alternative for the rapid (3–4 h) and accurate detection of Legionella.This work was financially supported by: LA/P/0045/2020 (ALiCE), UIDB/00511/2020 and UIDP/00511/2020 (LEPABE), funded by national funds through the FCT/MCTES (PIDDAC); Projects POCI-01-0145-FEDER-029961, POCI-01-0145-FEDER-031011 and POCI-01-0145-FEDER-030431 funded by FEDER funds through COMPETE2020—Programa Operacional Competitividade e Internacional ização (POCI) and by national funds (PIDDAC) through FCT/MCTES. Montserrat Nácher-Vázquez and Laura Cerqueira were also financed by Project POCI-01-0145-FEDER-029961.info:eu-repo/semantics/publishedVersionMDPIUniversidade do MinhoNácher-Vázquez, MontserratBarbosa, AnaArmelim, InêsAzevedo, Andreia SofiaAlmeida, Gonçalo NietoPizarro, CristinaAzevedo, Nuno FilipeAlmeida, CarinaCerqueira, Laura2022-07-132022-07-13T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://hdl.handle.net/1822/78872engNácher-Vázquez, Montserrat; Barbosa, Ana; Armelim, Inês; Azevedo, Andreia Sofia; Almeida, Gonçalo Nieto; Pizarro, Cristina; Azevedo, Nuno Filipe; Almeida, Carina; Cerqueira, Laura, Development of a novel peptide nucleic acid probe for the detection of Legionella spp. in water samples. Microorganisms, 10(7), 1409, 20222076-260710.3390/microorganisms10071409https://www.mdpi.com/2076-2607/10/7/1409info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:10:52Zoai:repositorium.sdum.uminho.pt:1822/78872Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:02:33.684528Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Development of a novel peptide nucleic acid probe for the detection of Legionella spp. in water samples |
title |
Development of a novel peptide nucleic acid probe for the detection of Legionella spp. in water samples |
spellingShingle |
Development of a novel peptide nucleic acid probe for the detection of Legionella spp. in water samples Nácher-Vázquez, Montserrat fluorescence in situ hybridization Legionella sp. peptide nucleic acid (PNA) 16S rRNA gene waterborne detection Science & Technology |
title_short |
Development of a novel peptide nucleic acid probe for the detection of Legionella spp. in water samples |
title_full |
Development of a novel peptide nucleic acid probe for the detection of Legionella spp. in water samples |
title_fullStr |
Development of a novel peptide nucleic acid probe for the detection of Legionella spp. in water samples |
title_full_unstemmed |
Development of a novel peptide nucleic acid probe for the detection of Legionella spp. in water samples |
title_sort |
Development of a novel peptide nucleic acid probe for the detection of Legionella spp. in water samples |
author |
Nácher-Vázquez, Montserrat |
author_facet |
Nácher-Vázquez, Montserrat Barbosa, Ana Armelim, Inês Azevedo, Andreia Sofia Almeida, Gonçalo Nieto Pizarro, Cristina Azevedo, Nuno Filipe Almeida, Carina Cerqueira, Laura |
author_role |
author |
author2 |
Barbosa, Ana Armelim, Inês Azevedo, Andreia Sofia Almeida, Gonçalo Nieto Pizarro, Cristina Azevedo, Nuno Filipe Almeida, Carina Cerqueira, Laura |
author2_role |
author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade do Minho |
dc.contributor.author.fl_str_mv |
Nácher-Vázquez, Montserrat Barbosa, Ana Armelim, Inês Azevedo, Andreia Sofia Almeida, Gonçalo Nieto Pizarro, Cristina Azevedo, Nuno Filipe Almeida, Carina Cerqueira, Laura |
dc.subject.por.fl_str_mv |
fluorescence in situ hybridization Legionella sp. peptide nucleic acid (PNA) 16S rRNA gene waterborne detection Science & Technology |
topic |
fluorescence in situ hybridization Legionella sp. peptide nucleic acid (PNA) 16S rRNA gene waterborne detection Science & Technology |
description |
Legionella are opportunistic intracellular pathogens that are found throughout the environment. The Legionella contamination of water systems represents a serious social problem that can lead to severe diseases, which can manifest as both Pontiac fever and Legionnaires’ disease (LD) infections. Fluorescence in situ hybridization using nucleic acid mimic probes (NAM-FISH) is a powerful and versatile technique for bacterial detection. By optimizing a peptide nucleic acid (PNA) sequence based on fluorescently selective binding to specific bacterial rRNA sequences, we established a new PNA-FISH method that has been successfully designed for the specific detection of the genus Legionella. The LEG22 PNA probe has shown great theoretical performance, presenting 99.9% specificity and 96.9% sensitivity. We also demonstrated that the PNA-FISH approach presents a good signal-to-noise ratio when applied in artificially contaminated water samples directly on filtration membranes or after cells elution. For water samples with higher turbidity (from cooling tower water systems), there is still the need for further method optimization in order to detect cellular contents and to overcome interferents’ autofluorescence, which hinders probe signal visualization. Nevertheless, this work shows that the PNA-FISH approach could be a promising alternative for the rapid (3–4 h) and accurate detection of Legionella. |
publishDate |
2022 |
dc.date.none.fl_str_mv |
2022-07-13 2022-07-13T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://hdl.handle.net/1822/78872 |
url |
https://hdl.handle.net/1822/78872 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Nácher-Vázquez, Montserrat; Barbosa, Ana; Armelim, Inês; Azevedo, Andreia Sofia; Almeida, Gonçalo Nieto; Pizarro, Cristina; Azevedo, Nuno Filipe; Almeida, Carina; Cerqueira, Laura, Development of a novel peptide nucleic acid probe for the detection of Legionella spp. in water samples. Microorganisms, 10(7), 1409, 2022 2076-2607 10.3390/microorganisms10071409 https://www.mdpi.com/2076-2607/10/7/1409 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
MDPI |
publisher.none.fl_str_mv |
MDPI |
dc.source.none.fl_str_mv |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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RCAAP |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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