Development of a novel peptide nucleic acid probe for the detection of Legionella spp. in water samples

Detalhes bibliográficos
Autor(a) principal: Nácher-Vázquez, Montserrat
Data de Publicação: 2022
Outros Autores: Barbosa, Ana, Armelim, Inês, Azevedo, Andreia Sofia, Almeida, Gonçalo Nieto, Pizarro, Cristina, Azevedo, Nuno Filipe, Almeida, Carina, Cerqueira, Laura
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://hdl.handle.net/1822/78872
Resumo: Legionella are opportunistic intracellular pathogens that are found throughout the environment. The Legionella contamination of water systems represents a serious social problem that can lead to severe diseases, which can manifest as both Pontiac fever and Legionnaires’ disease (LD) infections. Fluorescence in situ hybridization using nucleic acid mimic probes (NAM-FISH) is a powerful and versatile technique for bacterial detection. By optimizing a peptide nucleic acid (PNA) sequence based on fluorescently selective binding to specific bacterial rRNA sequences, we established a new PNA-FISH method that has been successfully designed for the specific detection of the genus Legionella. The LEG22 PNA probe has shown great theoretical performance, presenting 99.9% specificity and 96.9% sensitivity. We also demonstrated that the PNA-FISH approach presents a good signal-to-noise ratio when applied in artificially contaminated water samples directly on filtration membranes or after cells elution. For water samples with higher turbidity (from cooling tower water systems), there is still the need for further method optimization in order to detect cellular contents and to overcome interferents’ autofluorescence, which hinders probe signal visualization. Nevertheless, this work shows that the PNA-FISH approach could be a promising alternative for the rapid (3–4 h) and accurate detection of Legionella.
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spelling Development of a novel peptide nucleic acid probe for the detection of Legionella spp. in water samplesfluorescence in situ hybridizationLegionella sp.peptide nucleic acid (PNA)16S rRNA genewaterborne detectionScience & TechnologyLegionella are opportunistic intracellular pathogens that are found throughout the environment. The Legionella contamination of water systems represents a serious social problem that can lead to severe diseases, which can manifest as both Pontiac fever and Legionnaires’ disease (LD) infections. Fluorescence in situ hybridization using nucleic acid mimic probes (NAM-FISH) is a powerful and versatile technique for bacterial detection. By optimizing a peptide nucleic acid (PNA) sequence based on fluorescently selective binding to specific bacterial rRNA sequences, we established a new PNA-FISH method that has been successfully designed for the specific detection of the genus Legionella. The LEG22 PNA probe has shown great theoretical performance, presenting 99.9% specificity and 96.9% sensitivity. We also demonstrated that the PNA-FISH approach presents a good signal-to-noise ratio when applied in artificially contaminated water samples directly on filtration membranes or after cells elution. For water samples with higher turbidity (from cooling tower water systems), there is still the need for further method optimization in order to detect cellular contents and to overcome interferents’ autofluorescence, which hinders probe signal visualization. Nevertheless, this work shows that the PNA-FISH approach could be a promising alternative for the rapid (3–4 h) and accurate detection of Legionella.This work was financially supported by: LA/P/0045/2020 (ALiCE), UIDB/00511/2020 and UIDP/00511/2020 (LEPABE), funded by national funds through the FCT/MCTES (PIDDAC); Projects POCI-01-0145-FEDER-029961, POCI-01-0145-FEDER-031011 and POCI-01-0145-FEDER-030431 funded by FEDER funds through COMPETE2020—Programa Operacional Competitividade e Internacional ização (POCI) and by national funds (PIDDAC) through FCT/MCTES. Montserrat Nácher-Vázquez and Laura Cerqueira were also financed by Project POCI-01-0145-FEDER-029961.info:eu-repo/semantics/publishedVersionMDPIUniversidade do MinhoNácher-Vázquez, MontserratBarbosa, AnaArmelim, InêsAzevedo, Andreia SofiaAlmeida, Gonçalo NietoPizarro, CristinaAzevedo, Nuno FilipeAlmeida, CarinaCerqueira, Laura2022-07-132022-07-13T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://hdl.handle.net/1822/78872engNácher-Vázquez, Montserrat; Barbosa, Ana; Armelim, Inês; Azevedo, Andreia Sofia; Almeida, Gonçalo Nieto; Pizarro, Cristina; Azevedo, Nuno Filipe; Almeida, Carina; Cerqueira, Laura, Development of a novel peptide nucleic acid probe for the detection of Legionella spp. in water samples. Microorganisms, 10(7), 1409, 20222076-260710.3390/microorganisms10071409https://www.mdpi.com/2076-2607/10/7/1409info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:10:52Zoai:repositorium.sdum.uminho.pt:1822/78872Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:02:33.684528Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Development of a novel peptide nucleic acid probe for the detection of Legionella spp. in water samples
title Development of a novel peptide nucleic acid probe for the detection of Legionella spp. in water samples
spellingShingle Development of a novel peptide nucleic acid probe for the detection of Legionella spp. in water samples
Nácher-Vázquez, Montserrat
fluorescence in situ hybridization
Legionella sp.
peptide nucleic acid (PNA)
16S rRNA gene
waterborne detection
Science & Technology
title_short Development of a novel peptide nucleic acid probe for the detection of Legionella spp. in water samples
title_full Development of a novel peptide nucleic acid probe for the detection of Legionella spp. in water samples
title_fullStr Development of a novel peptide nucleic acid probe for the detection of Legionella spp. in water samples
title_full_unstemmed Development of a novel peptide nucleic acid probe for the detection of Legionella spp. in water samples
title_sort Development of a novel peptide nucleic acid probe for the detection of Legionella spp. in water samples
author Nácher-Vázquez, Montserrat
author_facet Nácher-Vázquez, Montserrat
Barbosa, Ana
Armelim, Inês
Azevedo, Andreia Sofia
Almeida, Gonçalo Nieto
Pizarro, Cristina
Azevedo, Nuno Filipe
Almeida, Carina
Cerqueira, Laura
author_role author
author2 Barbosa, Ana
Armelim, Inês
Azevedo, Andreia Sofia
Almeida, Gonçalo Nieto
Pizarro, Cristina
Azevedo, Nuno Filipe
Almeida, Carina
Cerqueira, Laura
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Nácher-Vázquez, Montserrat
Barbosa, Ana
Armelim, Inês
Azevedo, Andreia Sofia
Almeida, Gonçalo Nieto
Pizarro, Cristina
Azevedo, Nuno Filipe
Almeida, Carina
Cerqueira, Laura
dc.subject.por.fl_str_mv fluorescence in situ hybridization
Legionella sp.
peptide nucleic acid (PNA)
16S rRNA gene
waterborne detection
Science & Technology
topic fluorescence in situ hybridization
Legionella sp.
peptide nucleic acid (PNA)
16S rRNA gene
waterborne detection
Science & Technology
description Legionella are opportunistic intracellular pathogens that are found throughout the environment. The Legionella contamination of water systems represents a serious social problem that can lead to severe diseases, which can manifest as both Pontiac fever and Legionnaires’ disease (LD) infections. Fluorescence in situ hybridization using nucleic acid mimic probes (NAM-FISH) is a powerful and versatile technique for bacterial detection. By optimizing a peptide nucleic acid (PNA) sequence based on fluorescently selective binding to specific bacterial rRNA sequences, we established a new PNA-FISH method that has been successfully designed for the specific detection of the genus Legionella. The LEG22 PNA probe has shown great theoretical performance, presenting 99.9% specificity and 96.9% sensitivity. We also demonstrated that the PNA-FISH approach presents a good signal-to-noise ratio when applied in artificially contaminated water samples directly on filtration membranes or after cells elution. For water samples with higher turbidity (from cooling tower water systems), there is still the need for further method optimization in order to detect cellular contents and to overcome interferents’ autofluorescence, which hinders probe signal visualization. Nevertheless, this work shows that the PNA-FISH approach could be a promising alternative for the rapid (3–4 h) and accurate detection of Legionella.
publishDate 2022
dc.date.none.fl_str_mv 2022-07-13
2022-07-13T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://hdl.handle.net/1822/78872
url https://hdl.handle.net/1822/78872
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Nácher-Vázquez, Montserrat; Barbosa, Ana; Armelim, Inês; Azevedo, Andreia Sofia; Almeida, Gonçalo Nieto; Pizarro, Cristina; Azevedo, Nuno Filipe; Almeida, Carina; Cerqueira, Laura, Development of a novel peptide nucleic acid probe for the detection of Legionella spp. in water samples. Microorganisms, 10(7), 1409, 2022
2076-2607
10.3390/microorganisms10071409
https://www.mdpi.com/2076-2607/10/7/1409
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv MDPI
publisher.none.fl_str_mv MDPI
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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