Automatic crackle detection algorithm based on fractal dimension

Detalhes bibliográficos
Autor(a) principal: Pinho, Cátia
Data de Publicação: 2015
Outros Autores: Oliveira, Ana, Jácome, Cristina, Rodrigues, João, Marques, Alda
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10773/22430
Resumo: Crackles are adventitious respiratory sounds that provide valuable information on different respiratory conditions. Crackles automatic detection in a respiratory sound file is challenging, and thus different signal processing methodologies have been proposed. However, limited testing of such methodologies, namely in respiratory sound files collected in clinical settings, has been conducted. This study aimed to develop an algorithm for automatic crackle detection and characterisation and to evaluate its performance and accuracy against a multi-annotator gold standard. The algorithm is based on three main procedures: i) extraction of a window of interest of a potential crackle (based on fractal dimension and box filtering techniques); ii) verification of the validity of the potential crackle considering computerised respiratory sound analysis established criteria; and iii) characterisation and extraction of crackle parameters. Twenty four 10-second files, acquired in clinical settings, were selected from 10 patients with pneumonia and cystic fibrosis. The algorithm performance was assessed by comparing its results with gold standard annotations (obtained by the agreement among three experts). A set of 7 parameters was optimised. High levels of sensitivity (SE=89%), positive predictive value (PPV=95%) and overall performance (F index=92%) were achieved. This promising result highlights the potential of the algorithm for automatic crackle's detection/characterisation in respiratory sounds acquired in clinical settings.
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spelling Automatic crackle detection algorithm based on fractal dimensionAdventitious respiratory soundsCracklesAutomatic detection/classification algorithmsFractal dimensionBox filteringCrackles are adventitious respiratory sounds that provide valuable information on different respiratory conditions. Crackles automatic detection in a respiratory sound file is challenging, and thus different signal processing methodologies have been proposed. However, limited testing of such methodologies, namely in respiratory sound files collected in clinical settings, has been conducted. This study aimed to develop an algorithm for automatic crackle detection and characterisation and to evaluate its performance and accuracy against a multi-annotator gold standard. The algorithm is based on three main procedures: i) extraction of a window of interest of a potential crackle (based on fractal dimension and box filtering techniques); ii) verification of the validity of the potential crackle considering computerised respiratory sound analysis established criteria; and iii) characterisation and extraction of crackle parameters. Twenty four 10-second files, acquired in clinical settings, were selected from 10 patients with pneumonia and cystic fibrosis. The algorithm performance was assessed by comparing its results with gold standard annotations (obtained by the agreement among three experts). A set of 7 parameters was optimised. High levels of sensitivity (SE=89%), positive predictive value (PPV=95%) and overall performance (F index=92%) were achieved. This promising result highlights the potential of the algorithm for automatic crackle's detection/characterisation in respiratory sounds acquired in clinical settings.Elsevier2018-02-28T15:47:31Z2015-01-01T00:00:00Z2015info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10773/22430eng1877-050910.1016/j.procs.2015.08.592Pinho, CátiaOliveira, AnaJácome, CristinaRodrigues, JoãoMarques, Aldainfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-02-22T11:43:55Zoai:ria.ua.pt:10773/22430Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T02:56:33.117307Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Automatic crackle detection algorithm based on fractal dimension
title Automatic crackle detection algorithm based on fractal dimension
spellingShingle Automatic crackle detection algorithm based on fractal dimension
Pinho, Cátia
Adventitious respiratory sounds
Crackles
Automatic detection/classification algorithms
Fractal dimension
Box filtering
title_short Automatic crackle detection algorithm based on fractal dimension
title_full Automatic crackle detection algorithm based on fractal dimension
title_fullStr Automatic crackle detection algorithm based on fractal dimension
title_full_unstemmed Automatic crackle detection algorithm based on fractal dimension
title_sort Automatic crackle detection algorithm based on fractal dimension
author Pinho, Cátia
author_facet Pinho, Cátia
Oliveira, Ana
Jácome, Cristina
Rodrigues, João
Marques, Alda
author_role author
author2 Oliveira, Ana
Jácome, Cristina
Rodrigues, João
Marques, Alda
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Pinho, Cátia
Oliveira, Ana
Jácome, Cristina
Rodrigues, João
Marques, Alda
dc.subject.por.fl_str_mv Adventitious respiratory sounds
Crackles
Automatic detection/classification algorithms
Fractal dimension
Box filtering
topic Adventitious respiratory sounds
Crackles
Automatic detection/classification algorithms
Fractal dimension
Box filtering
description Crackles are adventitious respiratory sounds that provide valuable information on different respiratory conditions. Crackles automatic detection in a respiratory sound file is challenging, and thus different signal processing methodologies have been proposed. However, limited testing of such methodologies, namely in respiratory sound files collected in clinical settings, has been conducted. This study aimed to develop an algorithm for automatic crackle detection and characterisation and to evaluate its performance and accuracy against a multi-annotator gold standard. The algorithm is based on three main procedures: i) extraction of a window of interest of a potential crackle (based on fractal dimension and box filtering techniques); ii) verification of the validity of the potential crackle considering computerised respiratory sound analysis established criteria; and iii) characterisation and extraction of crackle parameters. Twenty four 10-second files, acquired in clinical settings, were selected from 10 patients with pneumonia and cystic fibrosis. The algorithm performance was assessed by comparing its results with gold standard annotations (obtained by the agreement among three experts). A set of 7 parameters was optimised. High levels of sensitivity (SE=89%), positive predictive value (PPV=95%) and overall performance (F index=92%) were achieved. This promising result highlights the potential of the algorithm for automatic crackle's detection/characterisation in respiratory sounds acquired in clinical settings.
publishDate 2015
dc.date.none.fl_str_mv 2015-01-01T00:00:00Z
2015
2018-02-28T15:47:31Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10773/22430
url http://hdl.handle.net/10773/22430
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1877-0509
10.1016/j.procs.2015.08.592
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Elsevier
publisher.none.fl_str_mv Elsevier
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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