An integrative omics approach to unravel toxicity mechanisms of environmental chemicals: effects of a formulated herbicide

Detalhes bibliográficos
Autor(a) principal: Simões, Tiago
Data de Publicação: 2018
Outros Autores: Novais, Sara C, Luz, Tiago Natal da, Devreese, Bart, de Boer, Tjalf, Roelofs, Dick, Sousa, José P., van Straalen, Nico M, Lemos, Marco F. L.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10316/108044
https://doi.org/10.1038/s41598-018-29662-6
Resumo: The use of integrative molecular approaches can aid in a comprehensive understanding of the effects of toxicants at different levels of biological organization, also supporting risk assessment. The present study aims to unravel the toxicity mechanisms of a widely used herbicide to the arthropod Folsomia candida exposed in a natural soil, by linking effects on reproduction, proteomics and genome-wide gene expression. The EC50 effects on reproduction over 4 weeks was 4.63 mg glyphosate/kg of soil. The formulation included a polyethoxylated tallowamine as an adjuvant, which at 50% effect on reproduction had an estimated concentration of 0.87-1.49 mg/kg of soil. No effects were observed on survival and reproduction when using the isolated active substance, pointing the toxicity of the formulated product to the co-formulant instead of the active ingredient, glyphosate. RNA sequencing and shotgun proteomics were applied to assess differential transcript and protein expressions between exposed and control organisms in time, respectively. Specific functional categories at protein and transcriptome levels were concordant with each other, despite overall limited correlations between datasets. The exposure to this formulation affected normal cellular respiration and lipid metabolism, inducing oxidative stress and leading to impairment in biological life cycle mechanisms such as molting and reproduction.
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spelling An integrative omics approach to unravel toxicity mechanisms of environmental chemicals: effects of a formulated herbicideAnimalsArthropodsEnvironmental PollutantsGene Expression RegulationGene OntologyGene Regulatory NetworksGenomicsHerbicidesRNA, MessengerReproductionSurvival AnalysisTranscriptomeToxicity TestsThe use of integrative molecular approaches can aid in a comprehensive understanding of the effects of toxicants at different levels of biological organization, also supporting risk assessment. The present study aims to unravel the toxicity mechanisms of a widely used herbicide to the arthropod Folsomia candida exposed in a natural soil, by linking effects on reproduction, proteomics and genome-wide gene expression. The EC50 effects on reproduction over 4 weeks was 4.63 mg glyphosate/kg of soil. The formulation included a polyethoxylated tallowamine as an adjuvant, which at 50% effect on reproduction had an estimated concentration of 0.87-1.49 mg/kg of soil. No effects were observed on survival and reproduction when using the isolated active substance, pointing the toxicity of the formulated product to the co-formulant instead of the active ingredient, glyphosate. RNA sequencing and shotgun proteomics were applied to assess differential transcript and protein expressions between exposed and control organisms in time, respectively. Specific functional categories at protein and transcriptome levels were concordant with each other, despite overall limited correlations between datasets. The exposure to this formulation affected normal cellular respiration and lipid metabolism, inducing oxidative stress and leading to impairment in biological life cycle mechanisms such as molting and reproduction.Springer Nature2018-07-27info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10316/108044http://hdl.handle.net/10316/108044https://doi.org/10.1038/s41598-018-29662-6eng2045-2322Simões, TiagoNovais, Sara CLuz, Tiago Natal daDevreese, Bartde Boer, TjalfRoelofs, DickSousa, José P.van Straalen, Nico MLemos, Marco F. L.info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-08-07T14:15:50Zoai:estudogeral.uc.pt:10316/108044Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T21:24:18.972Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv An integrative omics approach to unravel toxicity mechanisms of environmental chemicals: effects of a formulated herbicide
title An integrative omics approach to unravel toxicity mechanisms of environmental chemicals: effects of a formulated herbicide
spellingShingle An integrative omics approach to unravel toxicity mechanisms of environmental chemicals: effects of a formulated herbicide
Simões, Tiago
Animals
Arthropods
Environmental Pollutants
Gene Expression Regulation
Gene Ontology
Gene Regulatory Networks
Genomics
Herbicides
RNA, Messenger
Reproduction
Survival Analysis
Transcriptome
Toxicity Tests
title_short An integrative omics approach to unravel toxicity mechanisms of environmental chemicals: effects of a formulated herbicide
title_full An integrative omics approach to unravel toxicity mechanisms of environmental chemicals: effects of a formulated herbicide
title_fullStr An integrative omics approach to unravel toxicity mechanisms of environmental chemicals: effects of a formulated herbicide
title_full_unstemmed An integrative omics approach to unravel toxicity mechanisms of environmental chemicals: effects of a formulated herbicide
title_sort An integrative omics approach to unravel toxicity mechanisms of environmental chemicals: effects of a formulated herbicide
author Simões, Tiago
author_facet Simões, Tiago
Novais, Sara C
Luz, Tiago Natal da
Devreese, Bart
de Boer, Tjalf
Roelofs, Dick
Sousa, José P.
van Straalen, Nico M
Lemos, Marco F. L.
author_role author
author2 Novais, Sara C
Luz, Tiago Natal da
Devreese, Bart
de Boer, Tjalf
Roelofs, Dick
Sousa, José P.
van Straalen, Nico M
Lemos, Marco F. L.
author2_role author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Simões, Tiago
Novais, Sara C
Luz, Tiago Natal da
Devreese, Bart
de Boer, Tjalf
Roelofs, Dick
Sousa, José P.
van Straalen, Nico M
Lemos, Marco F. L.
dc.subject.por.fl_str_mv Animals
Arthropods
Environmental Pollutants
Gene Expression Regulation
Gene Ontology
Gene Regulatory Networks
Genomics
Herbicides
RNA, Messenger
Reproduction
Survival Analysis
Transcriptome
Toxicity Tests
topic Animals
Arthropods
Environmental Pollutants
Gene Expression Regulation
Gene Ontology
Gene Regulatory Networks
Genomics
Herbicides
RNA, Messenger
Reproduction
Survival Analysis
Transcriptome
Toxicity Tests
description The use of integrative molecular approaches can aid in a comprehensive understanding of the effects of toxicants at different levels of biological organization, also supporting risk assessment. The present study aims to unravel the toxicity mechanisms of a widely used herbicide to the arthropod Folsomia candida exposed in a natural soil, by linking effects on reproduction, proteomics and genome-wide gene expression. The EC50 effects on reproduction over 4 weeks was 4.63 mg glyphosate/kg of soil. The formulation included a polyethoxylated tallowamine as an adjuvant, which at 50% effect on reproduction had an estimated concentration of 0.87-1.49 mg/kg of soil. No effects were observed on survival and reproduction when using the isolated active substance, pointing the toxicity of the formulated product to the co-formulant instead of the active ingredient, glyphosate. RNA sequencing and shotgun proteomics were applied to assess differential transcript and protein expressions between exposed and control organisms in time, respectively. Specific functional categories at protein and transcriptome levels were concordant with each other, despite overall limited correlations between datasets. The exposure to this formulation affected normal cellular respiration and lipid metabolism, inducing oxidative stress and leading to impairment in biological life cycle mechanisms such as molting and reproduction.
publishDate 2018
dc.date.none.fl_str_mv 2018-07-27
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10316/108044
http://hdl.handle.net/10316/108044
https://doi.org/10.1038/s41598-018-29662-6
url http://hdl.handle.net/10316/108044
https://doi.org/10.1038/s41598-018-29662-6
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 2045-2322
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dc.publisher.none.fl_str_mv Springer Nature
publisher.none.fl_str_mv Springer Nature
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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