Novel strategy to detect and locate periodontal pathogens: The PNA-FISH technique

Detalhes bibliográficos
Autor(a) principal: Mendes, Luzia
Data de Publicação: 2016
Outros Autores: Rocha, Rui, Azevedo, Andreia S., Ferreira, Catarina, Henriques, Mariana, Pinto, Miguel Gonçalves, Azevedo, Nuno Filipe
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/1822/44858
Resumo: Purpose: We aim to develop peptic nucleic acid (PNA) probes for the identification and localization of Aggregatibacter actinomycetemcomintans and Porphyromonas gingivalis in sub-gingival plaque and gingival biopsies by Fluorescence in situ Hybridization (FISH). Methods A PNA probe was designed for each microorganism. The PNA-FISH method was optimized to allow simultaneous hybridization of both microorganisms with their probe (PNA-FISH multiplex). After being tested on representative strains of P. gingivalis and A. actinomycetemcomitans, the PNA-FISH method was then adapted to detect microorganisms in the subgingival plaque and gingival samples, collected from patients with severe periodontitis. Results The best hybridization conditions were found to be 59 °C for 150 min for both probes (PgPNA1007 and AaPNA235). The in silico sensitivity and specificity was both 100% for PgPNA1007 probe and 100% and 99.9% for AaPNA235 probe, respectively. Results on clinical samples showed that the PNA-FISH method was able to detect and discriminate target bacteria in the mixed microbial population of the subgingival plaque and within periodontal tissues. Conclusion This investigation presents a new highly accurate method for P. gingivalis and A. actinomycetemcomitans detection and co-location in clinical samples, in just few hours. With this technique we were able to observe spatial distribution of these species within polymicrobial communities in the periodontal pockets and, for the first time with the FISH method, in the organized gingival tissue.
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spelling Novel strategy to detect and locate periodontal pathogens: The PNA-FISH techniquePNA-FISHTissue invasionAggregatibacter actinomycetemcomitansPorphyromonas gingivalisPeriodontal diseaseScience & TechnologyPurpose: We aim to develop peptic nucleic acid (PNA) probes for the identification and localization of Aggregatibacter actinomycetemcomintans and Porphyromonas gingivalis in sub-gingival plaque and gingival biopsies by Fluorescence in situ Hybridization (FISH). Methods A PNA probe was designed for each microorganism. The PNA-FISH method was optimized to allow simultaneous hybridization of both microorganisms with their probe (PNA-FISH multiplex). After being tested on representative strains of P. gingivalis and A. actinomycetemcomitans, the PNA-FISH method was then adapted to detect microorganisms in the subgingival plaque and gingival samples, collected from patients with severe periodontitis. Results The best hybridization conditions were found to be 59 °C for 150 min for both probes (PgPNA1007 and AaPNA235). The in silico sensitivity and specificity was both 100% for PgPNA1007 probe and 100% and 99.9% for AaPNA235 probe, respectively. Results on clinical samples showed that the PNA-FISH method was able to detect and discriminate target bacteria in the mixed microbial population of the subgingival plaque and within periodontal tissues. Conclusion This investigation presents a new highly accurate method for P. gingivalis and A. actinomycetemcomitans detection and co-location in clinical samples, in just few hours. With this technique we were able to observe spatial distribution of these species within polymicrobial communities in the periodontal pockets and, for the first time with the FISH method, in the organized gingival tissue.The authors report no conflicts of interest. This work was financially supported by: Project POCI-01-0145-FEDER-006939 Laboratory for Process Engineering, Environment, Biotechnology and Energy—LEPABE funded by FEDER funds through COMPETE2020—Programa Operacional Competitividade e Internacionalização (POCI)—and by national funds through FCT—Fundação para a Ciência e a Tecnologia; PIC/IC/82815/2007, SFRH/BDE/51910/2012, SFRH/BD/82663/2011].ElsevierUniversidade do MinhoMendes, LuziaRocha, RuiAzevedo, Andreia S.Ferreira, CatarinaHenriques, MarianaPinto, Miguel GonçalvesAzevedo, Nuno Filipe2016-112016-11-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/44858engMendes, Luzia; Rocha, R.; Azevedo, Andreia S.; Ferreira, Catarina; Henriques, Mariana; Pinto, Miguel Gonçalves; Azevedo, Nuno Filipe, Novel strategy to detect and locate periodontal pathogens: The PNA-FISH technique. Microbiological Research, 192, 185-191, 20160944-501310.1016/j.micres.2016.07.00227664736https://www.journals.elsevier.com/microbiological-researchinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:52:51Zoai:repositorium.sdum.uminho.pt:1822/44858Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:52:05.017260Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Novel strategy to detect and locate periodontal pathogens: The PNA-FISH technique
title Novel strategy to detect and locate periodontal pathogens: The PNA-FISH technique
spellingShingle Novel strategy to detect and locate periodontal pathogens: The PNA-FISH technique
Mendes, Luzia
PNA-FISH
Tissue invasion
Aggregatibacter actinomycetemcomitans
Porphyromonas gingivalis
Periodontal disease
Science & Technology
title_short Novel strategy to detect and locate periodontal pathogens: The PNA-FISH technique
title_full Novel strategy to detect and locate periodontal pathogens: The PNA-FISH technique
title_fullStr Novel strategy to detect and locate periodontal pathogens: The PNA-FISH technique
title_full_unstemmed Novel strategy to detect and locate periodontal pathogens: The PNA-FISH technique
title_sort Novel strategy to detect and locate periodontal pathogens: The PNA-FISH technique
author Mendes, Luzia
author_facet Mendes, Luzia
Rocha, Rui
Azevedo, Andreia S.
Ferreira, Catarina
Henriques, Mariana
Pinto, Miguel Gonçalves
Azevedo, Nuno Filipe
author_role author
author2 Rocha, Rui
Azevedo, Andreia S.
Ferreira, Catarina
Henriques, Mariana
Pinto, Miguel Gonçalves
Azevedo, Nuno Filipe
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Mendes, Luzia
Rocha, Rui
Azevedo, Andreia S.
Ferreira, Catarina
Henriques, Mariana
Pinto, Miguel Gonçalves
Azevedo, Nuno Filipe
dc.subject.por.fl_str_mv PNA-FISH
Tissue invasion
Aggregatibacter actinomycetemcomitans
Porphyromonas gingivalis
Periodontal disease
Science & Technology
topic PNA-FISH
Tissue invasion
Aggregatibacter actinomycetemcomitans
Porphyromonas gingivalis
Periodontal disease
Science & Technology
description Purpose: We aim to develop peptic nucleic acid (PNA) probes for the identification and localization of Aggregatibacter actinomycetemcomintans and Porphyromonas gingivalis in sub-gingival plaque and gingival biopsies by Fluorescence in situ Hybridization (FISH). Methods A PNA probe was designed for each microorganism. The PNA-FISH method was optimized to allow simultaneous hybridization of both microorganisms with their probe (PNA-FISH multiplex). After being tested on representative strains of P. gingivalis and A. actinomycetemcomitans, the PNA-FISH method was then adapted to detect microorganisms in the subgingival plaque and gingival samples, collected from patients with severe periodontitis. Results The best hybridization conditions were found to be 59 °C for 150 min for both probes (PgPNA1007 and AaPNA235). The in silico sensitivity and specificity was both 100% for PgPNA1007 probe and 100% and 99.9% for AaPNA235 probe, respectively. Results on clinical samples showed that the PNA-FISH method was able to detect and discriminate target bacteria in the mixed microbial population of the subgingival plaque and within periodontal tissues. Conclusion This investigation presents a new highly accurate method for P. gingivalis and A. actinomycetemcomitans detection and co-location in clinical samples, in just few hours. With this technique we were able to observe spatial distribution of these species within polymicrobial communities in the periodontal pockets and, for the first time with the FISH method, in the organized gingival tissue.
publishDate 2016
dc.date.none.fl_str_mv 2016-11
2016-11-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1822/44858
url http://hdl.handle.net/1822/44858
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Mendes, Luzia; Rocha, R.; Azevedo, Andreia S.; Ferreira, Catarina; Henriques, Mariana; Pinto, Miguel Gonçalves; Azevedo, Nuno Filipe, Novel strategy to detect and locate periodontal pathogens: The PNA-FISH technique. Microbiological Research, 192, 185-191, 2016
0944-5013
10.1016/j.micres.2016.07.002
27664736
https://www.journals.elsevier.com/microbiological-research
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Elsevier
publisher.none.fl_str_mv Elsevier
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