Novel strategy to detect and locate periodontal pathogens: The PNA-FISH technique
Autor(a) principal: | |
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Data de Publicação: | 2016 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/1822/44858 |
Resumo: | Purpose: We aim to develop peptic nucleic acid (PNA) probes for the identification and localization of Aggregatibacter actinomycetemcomintans and Porphyromonas gingivalis in sub-gingival plaque and gingival biopsies by Fluorescence in situ Hybridization (FISH). Methods A PNA probe was designed for each microorganism. The PNA-FISH method was optimized to allow simultaneous hybridization of both microorganisms with their probe (PNA-FISH multiplex). After being tested on representative strains of P. gingivalis and A. actinomycetemcomitans, the PNA-FISH method was then adapted to detect microorganisms in the subgingival plaque and gingival samples, collected from patients with severe periodontitis. Results The best hybridization conditions were found to be 59 °C for 150 min for both probes (PgPNA1007 and AaPNA235). The in silico sensitivity and specificity was both 100% for PgPNA1007 probe and 100% and 99.9% for AaPNA235 probe, respectively. Results on clinical samples showed that the PNA-FISH method was able to detect and discriminate target bacteria in the mixed microbial population of the subgingival plaque and within periodontal tissues. Conclusion This investigation presents a new highly accurate method for P. gingivalis and A. actinomycetemcomitans detection and co-location in clinical samples, in just few hours. With this technique we were able to observe spatial distribution of these species within polymicrobial communities in the periodontal pockets and, for the first time with the FISH method, in the organized gingival tissue. |
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Novel strategy to detect and locate periodontal pathogens: The PNA-FISH techniquePNA-FISHTissue invasionAggregatibacter actinomycetemcomitansPorphyromonas gingivalisPeriodontal diseaseScience & TechnologyPurpose: We aim to develop peptic nucleic acid (PNA) probes for the identification and localization of Aggregatibacter actinomycetemcomintans and Porphyromonas gingivalis in sub-gingival plaque and gingival biopsies by Fluorescence in situ Hybridization (FISH). Methods A PNA probe was designed for each microorganism. The PNA-FISH method was optimized to allow simultaneous hybridization of both microorganisms with their probe (PNA-FISH multiplex). After being tested on representative strains of P. gingivalis and A. actinomycetemcomitans, the PNA-FISH method was then adapted to detect microorganisms in the subgingival plaque and gingival samples, collected from patients with severe periodontitis. Results The best hybridization conditions were found to be 59 °C for 150 min for both probes (PgPNA1007 and AaPNA235). The in silico sensitivity and specificity was both 100% for PgPNA1007 probe and 100% and 99.9% for AaPNA235 probe, respectively. Results on clinical samples showed that the PNA-FISH method was able to detect and discriminate target bacteria in the mixed microbial population of the subgingival plaque and within periodontal tissues. Conclusion This investigation presents a new highly accurate method for P. gingivalis and A. actinomycetemcomitans detection and co-location in clinical samples, in just few hours. With this technique we were able to observe spatial distribution of these species within polymicrobial communities in the periodontal pockets and, for the first time with the FISH method, in the organized gingival tissue.The authors report no conflicts of interest. This work was financially supported by: Project POCI-01-0145-FEDER-006939 Laboratory for Process Engineering, Environment, Biotechnology and Energy—LEPABE funded by FEDER funds through COMPETE2020—Programa Operacional Competitividade e Internacionalização (POCI)—and by national funds through FCT—Fundação para a Ciência e a Tecnologia; PIC/IC/82815/2007, SFRH/BDE/51910/2012, SFRH/BD/82663/2011].ElsevierUniversidade do MinhoMendes, LuziaRocha, RuiAzevedo, Andreia S.Ferreira, CatarinaHenriques, MarianaPinto, Miguel GonçalvesAzevedo, Nuno Filipe2016-112016-11-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/44858engMendes, Luzia; Rocha, R.; Azevedo, Andreia S.; Ferreira, Catarina; Henriques, Mariana; Pinto, Miguel Gonçalves; Azevedo, Nuno Filipe, Novel strategy to detect and locate periodontal pathogens: The PNA-FISH technique. Microbiological Research, 192, 185-191, 20160944-501310.1016/j.micres.2016.07.00227664736https://www.journals.elsevier.com/microbiological-researchinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:52:51Zoai:repositorium.sdum.uminho.pt:1822/44858Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:52:05.017260Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Novel strategy to detect and locate periodontal pathogens: The PNA-FISH technique |
title |
Novel strategy to detect and locate periodontal pathogens: The PNA-FISH technique |
spellingShingle |
Novel strategy to detect and locate periodontal pathogens: The PNA-FISH technique Mendes, Luzia PNA-FISH Tissue invasion Aggregatibacter actinomycetemcomitans Porphyromonas gingivalis Periodontal disease Science & Technology |
title_short |
Novel strategy to detect and locate periodontal pathogens: The PNA-FISH technique |
title_full |
Novel strategy to detect and locate periodontal pathogens: The PNA-FISH technique |
title_fullStr |
Novel strategy to detect and locate periodontal pathogens: The PNA-FISH technique |
title_full_unstemmed |
Novel strategy to detect and locate periodontal pathogens: The PNA-FISH technique |
title_sort |
Novel strategy to detect and locate periodontal pathogens: The PNA-FISH technique |
author |
Mendes, Luzia |
author_facet |
Mendes, Luzia Rocha, Rui Azevedo, Andreia S. Ferreira, Catarina Henriques, Mariana Pinto, Miguel Gonçalves Azevedo, Nuno Filipe |
author_role |
author |
author2 |
Rocha, Rui Azevedo, Andreia S. Ferreira, Catarina Henriques, Mariana Pinto, Miguel Gonçalves Azevedo, Nuno Filipe |
author2_role |
author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade do Minho |
dc.contributor.author.fl_str_mv |
Mendes, Luzia Rocha, Rui Azevedo, Andreia S. Ferreira, Catarina Henriques, Mariana Pinto, Miguel Gonçalves Azevedo, Nuno Filipe |
dc.subject.por.fl_str_mv |
PNA-FISH Tissue invasion Aggregatibacter actinomycetemcomitans Porphyromonas gingivalis Periodontal disease Science & Technology |
topic |
PNA-FISH Tissue invasion Aggregatibacter actinomycetemcomitans Porphyromonas gingivalis Periodontal disease Science & Technology |
description |
Purpose: We aim to develop peptic nucleic acid (PNA) probes for the identification and localization of Aggregatibacter actinomycetemcomintans and Porphyromonas gingivalis in sub-gingival plaque and gingival biopsies by Fluorescence in situ Hybridization (FISH). Methods A PNA probe was designed for each microorganism. The PNA-FISH method was optimized to allow simultaneous hybridization of both microorganisms with their probe (PNA-FISH multiplex). After being tested on representative strains of P. gingivalis and A. actinomycetemcomitans, the PNA-FISH method was then adapted to detect microorganisms in the subgingival plaque and gingival samples, collected from patients with severe periodontitis. Results The best hybridization conditions were found to be 59 °C for 150 min for both probes (PgPNA1007 and AaPNA235). The in silico sensitivity and specificity was both 100% for PgPNA1007 probe and 100% and 99.9% for AaPNA235 probe, respectively. Results on clinical samples showed that the PNA-FISH method was able to detect and discriminate target bacteria in the mixed microbial population of the subgingival plaque and within periodontal tissues. Conclusion This investigation presents a new highly accurate method for P. gingivalis and A. actinomycetemcomitans detection and co-location in clinical samples, in just few hours. With this technique we were able to observe spatial distribution of these species within polymicrobial communities in the periodontal pockets and, for the first time with the FISH method, in the organized gingival tissue. |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-11 2016-11-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/1822/44858 |
url |
http://hdl.handle.net/1822/44858 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Mendes, Luzia; Rocha, R.; Azevedo, Andreia S.; Ferreira, Catarina; Henriques, Mariana; Pinto, Miguel Gonçalves; Azevedo, Nuno Filipe, Novel strategy to detect and locate periodontal pathogens: The PNA-FISH technique. Microbiological Research, 192, 185-191, 2016 0944-5013 10.1016/j.micres.2016.07.002 27664736 https://www.journals.elsevier.com/microbiological-research |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Elsevier |
publisher.none.fl_str_mv |
Elsevier |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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