Identification of the sirohaem biosynthesis pathway in Staphylococcus aureus

Detalhes bibliográficos
Autor(a) principal: Videira, Marco A.M.
Data de Publicação: 2020
Outros Autores: Lobo, Susana A.L., Sousa, Filipa L., Saraiva, Lígia M.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10362/91636
Resumo: Sirohaem is a modified tetrapyrrole and a key prosthetic group of several enzymes involved in nitrogen and sulfur metabolisms. This work shows that Staphylococcus aureus produces sirohaem through a pathway formed by three independent enzymes. Of the two putative sirohaem synthases encoded in the S. aureus genome and annotated as cysG, one is herein shown to be a uroporphyrinogen III methyltransferase that converts uroporphyrinogen III to precorrin-2, and was renamed as UroM. The second cysG gene encodes a precorrin-2 dehydrogenase that converts precorrin-2 to sirohydrochlorin, and was designated as P2D. The last step was found to be performed by the gene nirR that, in fact, codes for a protein with sirohydrochlorin ferrochelatase activity, labelled as ShfC. Additionally, site-directed mutagenesis studies of S. aureus ShfC revealed that residues H22 and H87, which are predicted by homology modelling to be located at the active site, control the ferrochelatase activity. Within bacteria, sirohaem synthesis may occur via one, two or three enzymes, and we propose to name the correspondent pathways as Types 1, 2 and 3, respectively. A phylogenetic analysis revealed that Type 1 is the most used pathway in Gammaproteobacteria and Streptomycetales, Type 2 predominates in Fibrobacteres and Vibrionales, and Type 3 predominates in Firmicutes of the Bacillales order. Altogether, we concluded that the current distribution of sirohaem pathways within bacteria, which changes at the genus or species level and within taxa, seems to be the result of evolutionary multiple fusion/fission events.
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spelling Identification of the sirohaem biosynthesis pathway in Staphylococcus aureusferrochelatasehaemsirohaemStaphylococcustetrapyrrole biosynthesisBiochemistryMolecular BiologyCell BiologySirohaem is a modified tetrapyrrole and a key prosthetic group of several enzymes involved in nitrogen and sulfur metabolisms. This work shows that Staphylococcus aureus produces sirohaem through a pathway formed by three independent enzymes. Of the two putative sirohaem synthases encoded in the S. aureus genome and annotated as cysG, one is herein shown to be a uroporphyrinogen III methyltransferase that converts uroporphyrinogen III to precorrin-2, and was renamed as UroM. The second cysG gene encodes a precorrin-2 dehydrogenase that converts precorrin-2 to sirohydrochlorin, and was designated as P2D. The last step was found to be performed by the gene nirR that, in fact, codes for a protein with sirohydrochlorin ferrochelatase activity, labelled as ShfC. Additionally, site-directed mutagenesis studies of S. aureus ShfC revealed that residues H22 and H87, which are predicted by homology modelling to be located at the active site, control the ferrochelatase activity. Within bacteria, sirohaem synthesis may occur via one, two or three enzymes, and we propose to name the correspondent pathways as Types 1, 2 and 3, respectively. A phylogenetic analysis revealed that Type 1 is the most used pathway in Gammaproteobacteria and Streptomycetales, Type 2 predominates in Fibrobacteres and Vibrionales, and Type 3 predominates in Firmicutes of the Bacillales order. Altogether, we concluded that the current distribution of sirohaem pathways within bacteria, which changes at the genus or species level and within taxa, seems to be the result of evolutionary multiple fusion/fission events.Instituto de Tecnologia Química e Biológica António Xavier (ITQB)RUNVideira, Marco A.M.Lobo, Susana A.L.Sousa, Filipa L.Saraiva, Lígia M.2020-01-22T23:38:51Z20202020-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10362/91636eng1742-464XPURE: 15891427https://doi.org/10.1111/febs.15091metadata only accessinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-03-11T04:40:45Zoai:run.unl.pt:10362/91636Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T03:37:23.354342Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Identification of the sirohaem biosynthesis pathway in Staphylococcus aureus
title Identification of the sirohaem biosynthesis pathway in Staphylococcus aureus
spellingShingle Identification of the sirohaem biosynthesis pathway in Staphylococcus aureus
Videira, Marco A.M.
ferrochelatase
haem
sirohaem
Staphylococcus
tetrapyrrole biosynthesis
Biochemistry
Molecular Biology
Cell Biology
title_short Identification of the sirohaem biosynthesis pathway in Staphylococcus aureus
title_full Identification of the sirohaem biosynthesis pathway in Staphylococcus aureus
title_fullStr Identification of the sirohaem biosynthesis pathway in Staphylococcus aureus
title_full_unstemmed Identification of the sirohaem biosynthesis pathway in Staphylococcus aureus
title_sort Identification of the sirohaem biosynthesis pathway in Staphylococcus aureus
author Videira, Marco A.M.
author_facet Videira, Marco A.M.
Lobo, Susana A.L.
Sousa, Filipa L.
Saraiva, Lígia M.
author_role author
author2 Lobo, Susana A.L.
Sousa, Filipa L.
Saraiva, Lígia M.
author2_role author
author
author
dc.contributor.none.fl_str_mv Instituto de Tecnologia Química e Biológica António Xavier (ITQB)
RUN
dc.contributor.author.fl_str_mv Videira, Marco A.M.
Lobo, Susana A.L.
Sousa, Filipa L.
Saraiva, Lígia M.
dc.subject.por.fl_str_mv ferrochelatase
haem
sirohaem
Staphylococcus
tetrapyrrole biosynthesis
Biochemistry
Molecular Biology
Cell Biology
topic ferrochelatase
haem
sirohaem
Staphylococcus
tetrapyrrole biosynthesis
Biochemistry
Molecular Biology
Cell Biology
description Sirohaem is a modified tetrapyrrole and a key prosthetic group of several enzymes involved in nitrogen and sulfur metabolisms. This work shows that Staphylococcus aureus produces sirohaem through a pathway formed by three independent enzymes. Of the two putative sirohaem synthases encoded in the S. aureus genome and annotated as cysG, one is herein shown to be a uroporphyrinogen III methyltransferase that converts uroporphyrinogen III to precorrin-2, and was renamed as UroM. The second cysG gene encodes a precorrin-2 dehydrogenase that converts precorrin-2 to sirohydrochlorin, and was designated as P2D. The last step was found to be performed by the gene nirR that, in fact, codes for a protein with sirohydrochlorin ferrochelatase activity, labelled as ShfC. Additionally, site-directed mutagenesis studies of S. aureus ShfC revealed that residues H22 and H87, which are predicted by homology modelling to be located at the active site, control the ferrochelatase activity. Within bacteria, sirohaem synthesis may occur via one, two or three enzymes, and we propose to name the correspondent pathways as Types 1, 2 and 3, respectively. A phylogenetic analysis revealed that Type 1 is the most used pathway in Gammaproteobacteria and Streptomycetales, Type 2 predominates in Fibrobacteres and Vibrionales, and Type 3 predominates in Firmicutes of the Bacillales order. Altogether, we concluded that the current distribution of sirohaem pathways within bacteria, which changes at the genus or species level and within taxa, seems to be the result of evolutionary multiple fusion/fission events.
publishDate 2020
dc.date.none.fl_str_mv 2020-01-22T23:38:51Z
2020
2020-01-01T00:00:00Z
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PURE: 15891427
https://doi.org/10.1111/febs.15091
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