Classification of mice hepatic granuloma microscopic images based on a deep convolutional neural network

Detalhes bibliográficos
Autor(a) principal: Yu Wang
Data de Publicação: 2019
Outros Autores: Yating Chen, Ningning Yan, Longfei Zheng, Nilanjan Dey, Amira S. Ashour, V. Rajinikanth, João Manuel R. S. Tavares, Fuqian Shi
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://hdl.handle.net/10216/116257
Resumo: Hepatic granuloma develops in the early stage of liver cirrhosis which can seriously injury liver health. At present, the assessment of medical microscopic images is necessary for various diseases and the exploiting of artificial intelligence technology to assist pathology doctors in pre-diagnosis is the trend of future medical development. In this article, we try to classify mice liver microscopic images of normal, granuloma-fibrosis 1 and granuloma-fibrosis2, using convolutional neural networks (CNNs) and two conventional machine learning methods: support vector machine (SVM) and random forest (RF). On account of the included small dataset of 30 mice liver microscopic images, the proposed work included a preprocessing stage to deal with the problem of insufficient image number, which included the cropping of the original microscopic images to small patches, and the disorderly recombination after cropping and labeling the cropped patches In addition, recognizable texture features are extracted and selected using gray the level co-occurrence matrix (GLCM), local binary pattern (LBP) and Pearson correlation coefficient (PCC), respectively. The results established a classification accuracy of 82.78% of the proposed CNN based classifiers to classify 3 types of images. In addition, the confusion matrix figures out that the accuracy of the classification results using the proposed CNNs based classifiers for the normal class, granuloma-fibrosisl, and granuloma-fibrosis2 were 92.5%, 76.67%, and 79.17%, respectively. The comparative study of the proposed CNN based classifier and the SVM and RF proved the superiority of the CNNs showing its promising performance for clinical cases.
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spelling Classification of mice hepatic granuloma microscopic images based on a deep convolutional neural networkCiências da Saúde, Ciências TecnológicasHealth sciences, Technological sciencesHepatic granuloma develops in the early stage of liver cirrhosis which can seriously injury liver health. At present, the assessment of medical microscopic images is necessary for various diseases and the exploiting of artificial intelligence technology to assist pathology doctors in pre-diagnosis is the trend of future medical development. In this article, we try to classify mice liver microscopic images of normal, granuloma-fibrosis 1 and granuloma-fibrosis2, using convolutional neural networks (CNNs) and two conventional machine learning methods: support vector machine (SVM) and random forest (RF). On account of the included small dataset of 30 mice liver microscopic images, the proposed work included a preprocessing stage to deal with the problem of insufficient image number, which included the cropping of the original microscopic images to small patches, and the disorderly recombination after cropping and labeling the cropped patches In addition, recognizable texture features are extracted and selected using gray the level co-occurrence matrix (GLCM), local binary pattern (LBP) and Pearson correlation coefficient (PCC), respectively. The results established a classification accuracy of 82.78% of the proposed CNN based classifiers to classify 3 types of images. In addition, the confusion matrix figures out that the accuracy of the classification results using the proposed CNNs based classifiers for the normal class, granuloma-fibrosisl, and granuloma-fibrosis2 were 92.5%, 76.67%, and 79.17%, respectively. The comparative study of the proposed CNN based classifier and the SVM and RF proved the superiority of the CNNs showing its promising performance for clinical cases.2019-012019-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleimage/pngapplication/pdfhttps://hdl.handle.net/10216/116257eng1568-494610.1016/j.asoc.2018.10.006Yu WangYating ChenNingning YanLongfei ZhengNilanjan DeyAmira S. AshourV. RajinikanthJoão Manuel R. S. TavaresFuqian Shiinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-29T13:47:08Zoai:repositorio-aberto.up.pt:10216/116257Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T23:47:34.539276Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Classification of mice hepatic granuloma microscopic images based on a deep convolutional neural network
title Classification of mice hepatic granuloma microscopic images based on a deep convolutional neural network
spellingShingle Classification of mice hepatic granuloma microscopic images based on a deep convolutional neural network
Yu Wang
Ciências da Saúde, Ciências Tecnológicas
Health sciences, Technological sciences
title_short Classification of mice hepatic granuloma microscopic images based on a deep convolutional neural network
title_full Classification of mice hepatic granuloma microscopic images based on a deep convolutional neural network
title_fullStr Classification of mice hepatic granuloma microscopic images based on a deep convolutional neural network
title_full_unstemmed Classification of mice hepatic granuloma microscopic images based on a deep convolutional neural network
title_sort Classification of mice hepatic granuloma microscopic images based on a deep convolutional neural network
author Yu Wang
author_facet Yu Wang
Yating Chen
Ningning Yan
Longfei Zheng
Nilanjan Dey
Amira S. Ashour
V. Rajinikanth
João Manuel R. S. Tavares
Fuqian Shi
author_role author
author2 Yating Chen
Ningning Yan
Longfei Zheng
Nilanjan Dey
Amira S. Ashour
V. Rajinikanth
João Manuel R. S. Tavares
Fuqian Shi
author2_role author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Yu Wang
Yating Chen
Ningning Yan
Longfei Zheng
Nilanjan Dey
Amira S. Ashour
V. Rajinikanth
João Manuel R. S. Tavares
Fuqian Shi
dc.subject.por.fl_str_mv Ciências da Saúde, Ciências Tecnológicas
Health sciences, Technological sciences
topic Ciências da Saúde, Ciências Tecnológicas
Health sciences, Technological sciences
description Hepatic granuloma develops in the early stage of liver cirrhosis which can seriously injury liver health. At present, the assessment of medical microscopic images is necessary for various diseases and the exploiting of artificial intelligence technology to assist pathology doctors in pre-diagnosis is the trend of future medical development. In this article, we try to classify mice liver microscopic images of normal, granuloma-fibrosis 1 and granuloma-fibrosis2, using convolutional neural networks (CNNs) and two conventional machine learning methods: support vector machine (SVM) and random forest (RF). On account of the included small dataset of 30 mice liver microscopic images, the proposed work included a preprocessing stage to deal with the problem of insufficient image number, which included the cropping of the original microscopic images to small patches, and the disorderly recombination after cropping and labeling the cropped patches In addition, recognizable texture features are extracted and selected using gray the level co-occurrence matrix (GLCM), local binary pattern (LBP) and Pearson correlation coefficient (PCC), respectively. The results established a classification accuracy of 82.78% of the proposed CNN based classifiers to classify 3 types of images. In addition, the confusion matrix figures out that the accuracy of the classification results using the proposed CNNs based classifiers for the normal class, granuloma-fibrosisl, and granuloma-fibrosis2 were 92.5%, 76.67%, and 79.17%, respectively. The comparative study of the proposed CNN based classifier and the SVM and RF proved the superiority of the CNNs showing its promising performance for clinical cases.
publishDate 2019
dc.date.none.fl_str_mv 2019-01
2019-01-01T00:00:00Z
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url https://hdl.handle.net/10216/116257
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dc.relation.none.fl_str_mv 1568-4946
10.1016/j.asoc.2018.10.006
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