SEIRS Reaction-Diffusion Model

Detalhes bibliográficos
Autor(a) principal: Castelhano, Alice Neves
Data de Publicação: 2022
Tipo de documento: Dissertação
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10362/150516
Resumo: This thesis seeks to understand the effect of the inclusion of spacial heterogeneity in a SEIRS transmission model by considering a reaction-diffusion SEIRS model. Heterogeneity may correspond to different factors such as the different age classes, contact or spatial matrices, stage of the disease or behaviour. The model in study is suitable for a non-homogeneous population in which the epidemiological parameters depend on the spatial position of each individual. A spatial SEIRS reaction-diffusion model is developed and we focus our theoretical study in the existence of solutions for the equilibrium problem of the epidemic model and their respective steady states. First a global solution of the model is shown to exist. The disease free equilibrium (DFE) is established and its asymptotic profiles determined depending on the basic reproduction number, R0, is defined for two distinguished problems - one with all diffusion coefficients set as positive constants and the other with some diffusion coefficients equal to zero. It is shown for both epidemic problems that if R0 < 1 then the DFE is locally asymptotically stable, else it is unstable. A numerical method based on finite difference schemes is considered to approximate the solution of the reaction-diffusion system of equations and using the proposed method we present simulations that illustrate the theoretical results stated in the previous chapters. Lastly, the model is parameterized according to studies for COVID-19 transmission dynamics in Portugal. Here, we illustrate the model predictions for the non-spatial and spatial case. Furthermore, different scenarios for the implementation of non-pharmacological interventions are illustrated from February 2020 to June 2020. Simulations suggest that the lockdown imposed in Portugal on the 18th of March 2020 reduced the number of infected individuals in approximately 254490 daily cases.
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spelling SEIRS Reaction-Diffusion ModelSpatial heterogeneity-SEIRS modelBasic reproduction numberDiseasefree equilibriumEndemic equilibriumSARS-Cov-2Domínio/Área Científica::Ciências Naturais::MatemáticasThis thesis seeks to understand the effect of the inclusion of spacial heterogeneity in a SEIRS transmission model by considering a reaction-diffusion SEIRS model. Heterogeneity may correspond to different factors such as the different age classes, contact or spatial matrices, stage of the disease or behaviour. The model in study is suitable for a non-homogeneous population in which the epidemiological parameters depend on the spatial position of each individual. A spatial SEIRS reaction-diffusion model is developed and we focus our theoretical study in the existence of solutions for the equilibrium problem of the epidemic model and their respective steady states. First a global solution of the model is shown to exist. The disease free equilibrium (DFE) is established and its asymptotic profiles determined depending on the basic reproduction number, R0, is defined for two distinguished problems - one with all diffusion coefficients set as positive constants and the other with some diffusion coefficients equal to zero. It is shown for both epidemic problems that if R0 < 1 then the DFE is locally asymptotically stable, else it is unstable. A numerical method based on finite difference schemes is considered to approximate the solution of the reaction-diffusion system of equations and using the proposed method we present simulations that illustrate the theoretical results stated in the previous chapters. Lastly, the model is parameterized according to studies for COVID-19 transmission dynamics in Portugal. Here, we illustrate the model predictions for the non-spatial and spatial case. Furthermore, different scenarios for the implementation of non-pharmacological interventions are illustrated from February 2020 to June 2020. Simulations suggest that the lockdown imposed in Portugal on the 18th of March 2020 reduced the number of infected individuals in approximately 254490 daily cases.A presente tese de mestrado tem como objetivo compreender o efeito da inclusão da heterogeneidade espacial em modelos epidémicos usando um modelo SEIRS de reação difusão. A heterogeneidade pode corresponder a diferentes fatores, tais como as diferentes classes etárias, matrizes de contacto ou espaciais, fase da doença ou comportamento. O modelo em estudo está adaptado a uma população não homogénea em que os parâmetros epidemiológicos dependem da posição espacial de cada indivíduo. Inicialmente desenvolvemos o nosso estudo teórico do modelo espacial SEIRS de reação-difusão. Demonstramos a existência de uma solução global do modelo. Para o problema de equilíbrio associado prova-se a existência de um equilíbrio sem doença (DFE) e é feito o estudo dos perfis assimptóticos da DFE. O número básico de reprodução, R0, é definido para dois problemas distintos - um com todos os coeficientes de difusão definidos como constantes positivas e o segundo com alguns dos coeficientes de difusão definidos iguais a zero. É demonstrado para ambos os problemas epidémicos que se R0 < 1, então a DFE é localmente assimptoticamente estável, caso contrário é instável. Um método numérico baseado em esquemas de diferenças finitas é considerado para aproximar a solução do sistema reação-difusão e utilizando o método proposto apresentamos simulações que ilustram os resultados teóricos declarados nos capítulos anteriores. Por último, o modelo é parametrizado de acordo com a literatura disponível sobre a dinâmica de transmissão de COVID-19 em Portugal. Aqui, ilustramos as simulações do modelo para o caso não-espacial e espacial. Além disso, são ilustrados diferentes cenários para a implementação de intervenções não-farmacológicas entre fevereiro de 2020 e junho de 2020. As simulações apresentadas sugerem que o confinamento imposto em Portugal a 18 de Março de 2020 reduziu o número de indivíduos infetados em aproximadamente 254490 casos diários.Rebelo, MagdaPatrício, PaulaRUNCastelhano, Alice Neves2023-03-14T13:51:12Z2022-022022-02-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttp://hdl.handle.net/10362/150516enginfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-03-11T05:32:32Zoai:run.unl.pt:10362/150516Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T03:54:10.152821Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv SEIRS Reaction-Diffusion Model
title SEIRS Reaction-Diffusion Model
spellingShingle SEIRS Reaction-Diffusion Model
Castelhano, Alice Neves
Spatial heterogeneity
-SEIRS model
Basic reproduction number
Diseasefree equilibrium
Endemic equilibrium
SARS-Cov-2
Domínio/Área Científica::Ciências Naturais::Matemáticas
title_short SEIRS Reaction-Diffusion Model
title_full SEIRS Reaction-Diffusion Model
title_fullStr SEIRS Reaction-Diffusion Model
title_full_unstemmed SEIRS Reaction-Diffusion Model
title_sort SEIRS Reaction-Diffusion Model
author Castelhano, Alice Neves
author_facet Castelhano, Alice Neves
author_role author
dc.contributor.none.fl_str_mv Rebelo, Magda
Patrício, Paula
RUN
dc.contributor.author.fl_str_mv Castelhano, Alice Neves
dc.subject.por.fl_str_mv Spatial heterogeneity
-SEIRS model
Basic reproduction number
Diseasefree equilibrium
Endemic equilibrium
SARS-Cov-2
Domínio/Área Científica::Ciências Naturais::Matemáticas
topic Spatial heterogeneity
-SEIRS model
Basic reproduction number
Diseasefree equilibrium
Endemic equilibrium
SARS-Cov-2
Domínio/Área Científica::Ciências Naturais::Matemáticas
description This thesis seeks to understand the effect of the inclusion of spacial heterogeneity in a SEIRS transmission model by considering a reaction-diffusion SEIRS model. Heterogeneity may correspond to different factors such as the different age classes, contact or spatial matrices, stage of the disease or behaviour. The model in study is suitable for a non-homogeneous population in which the epidemiological parameters depend on the spatial position of each individual. A spatial SEIRS reaction-diffusion model is developed and we focus our theoretical study in the existence of solutions for the equilibrium problem of the epidemic model and their respective steady states. First a global solution of the model is shown to exist. The disease free equilibrium (DFE) is established and its asymptotic profiles determined depending on the basic reproduction number, R0, is defined for two distinguished problems - one with all diffusion coefficients set as positive constants and the other with some diffusion coefficients equal to zero. It is shown for both epidemic problems that if R0 < 1 then the DFE is locally asymptotically stable, else it is unstable. A numerical method based on finite difference schemes is considered to approximate the solution of the reaction-diffusion system of equations and using the proposed method we present simulations that illustrate the theoretical results stated in the previous chapters. Lastly, the model is parameterized according to studies for COVID-19 transmission dynamics in Portugal. Here, we illustrate the model predictions for the non-spatial and spatial case. Furthermore, different scenarios for the implementation of non-pharmacological interventions are illustrated from February 2020 to June 2020. Simulations suggest that the lockdown imposed in Portugal on the 18th of March 2020 reduced the number of infected individuals in approximately 254490 daily cases.
publishDate 2022
dc.date.none.fl_str_mv 2022-02
2022-02-01T00:00:00Z
2023-03-14T13:51:12Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
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status_str publishedVersion
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url http://hdl.handle.net/10362/150516
dc.language.iso.fl_str_mv eng
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instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
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