Molecular recognition of tumor-associated antigens by lectins and antibodies
Autor(a) principal: | |
---|---|
Data de Publicação: | 2017 |
Tipo de documento: | Dissertação |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10362/26262 |
Resumo: | Every living cell on Earth is covered by glycans. They are inserted in proteins and lipids by a posttranslational modification called glycosylation. Their recognition by specific receptors is translated into distinct biological signals. In cancer cells, a misregulation in expression and/or activity of glycosyltransferases, alters the mechanism of glycosylation, creating new glycan epitopes dubbed tumor-associated carbohydrate antigens (TACAs). These are recognized by various receptors, playing a major role in tumor immune responses and metastasis. To target cancer-associated glycan phenotype is crucial to disentangle the molecular recognition process that involves TACAs recognition and biosynthesis. Therefore, NMR techniques were employed to investigate distinct glycan-protein systems: i) the molecular interactions between a mucin-1 (MUC1) related Tn-glycopeptide mimetic containing a non-natural amino acid and distinct antibodies by saturation transfer-difference (STD-NMR); ii) the molecular interactions between galectin-3 (Gal-3) and TF-antigen (TF-Thr and TF-peptide), by heteronuclear single quantum coherence 1H,15N-HSQC titrations, STD-NMR and line broadening analysis and iii) the glycosylation of MUC1 tandem repeated protein (G1VT3S4APDT8RPAPGS14T15APPAH20)4 by GalNAc-T3 using 1H,15N-HSQC and STD-NMR. In i), the STD-NMR binding experiments show that all antibodies under study recognize the Tn-glycopeptide mimetic and point out structural differences that explain antibodies’ binding preferences. In ii), the 1H,15N-HSQC titrations experiments indicate that Gal-3 binds both TF-derivatives. The dissociation constant KD estimated for both through chemical shift analysis also shows the same range of affinity (275 μM and 413 μM for TF-antigen and TF-peptide, respectively). STD-NMR results demonstrate that the protons from galactose in the TF-moiety govern the recognition process of Gal-3. In iii), the 1H,15N-HSQC experiments of MUC1 in presence of GalNAc-T3 show that the enzyme has preference to glycosylate first the Thr at –GVTS-, followed by the residue Thr at –GSTA-. STD-NMR confirms the cooperative mechanism between the lectin and catalytic domain of GalNAc-T3. |
id |
RCAP_201af474d564729352ccb7d89d3fda29 |
---|---|
oai_identifier_str |
oai:run.unl.pt:10362/26262 |
network_acronym_str |
RCAP |
network_name_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository_id_str |
7160 |
spelling |
Molecular recognition of tumor-associated antigens by lectins and antibodiesCarbohydrate-protein interactionsNMR SpectroscopyGalectinsAntibodiesGalNAc-transferasesMucin-1Domínio/Área Científica::Engenharia e Tecnologia::Engenharia QuímicaEvery living cell on Earth is covered by glycans. They are inserted in proteins and lipids by a posttranslational modification called glycosylation. Their recognition by specific receptors is translated into distinct biological signals. In cancer cells, a misregulation in expression and/or activity of glycosyltransferases, alters the mechanism of glycosylation, creating new glycan epitopes dubbed tumor-associated carbohydrate antigens (TACAs). These are recognized by various receptors, playing a major role in tumor immune responses and metastasis. To target cancer-associated glycan phenotype is crucial to disentangle the molecular recognition process that involves TACAs recognition and biosynthesis. Therefore, NMR techniques were employed to investigate distinct glycan-protein systems: i) the molecular interactions between a mucin-1 (MUC1) related Tn-glycopeptide mimetic containing a non-natural amino acid and distinct antibodies by saturation transfer-difference (STD-NMR); ii) the molecular interactions between galectin-3 (Gal-3) and TF-antigen (TF-Thr and TF-peptide), by heteronuclear single quantum coherence 1H,15N-HSQC titrations, STD-NMR and line broadening analysis and iii) the glycosylation of MUC1 tandem repeated protein (G1VT3S4APDT8RPAPGS14T15APPAH20)4 by GalNAc-T3 using 1H,15N-HSQC and STD-NMR. In i), the STD-NMR binding experiments show that all antibodies under study recognize the Tn-glycopeptide mimetic and point out structural differences that explain antibodies’ binding preferences. In ii), the 1H,15N-HSQC titrations experiments indicate that Gal-3 binds both TF-derivatives. The dissociation constant KD estimated for both through chemical shift analysis also shows the same range of affinity (275 μM and 413 μM for TF-antigen and TF-peptide, respectively). STD-NMR results demonstrate that the protons from galactose in the TF-moiety govern the recognition process of Gal-3. In iii), the 1H,15N-HSQC experiments of MUC1 in presence of GalNAc-T3 show that the enzyme has preference to glycosylate first the Thr at –GVTS-, followed by the residue Thr at –GSTA-. STD-NMR confirms the cooperative mechanism between the lectin and catalytic domain of GalNAc-T3.Marcelo, FilipaRUNGrosso, Ana Sofia de Campos2019-10-22T00:30:33Z2017-092017-122017-09-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttp://hdl.handle.net/10362/26262enginfo:eu-repo/semantics/embargoedAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-03-11T04:13:51Zoai:run.unl.pt:10362/26262Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T03:28:28.647652Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Molecular recognition of tumor-associated antigens by lectins and antibodies |
title |
Molecular recognition of tumor-associated antigens by lectins and antibodies |
spellingShingle |
Molecular recognition of tumor-associated antigens by lectins and antibodies Grosso, Ana Sofia de Campos Carbohydrate-protein interactions NMR Spectroscopy Galectins Antibodies GalNAc-transferases Mucin-1 Domínio/Área Científica::Engenharia e Tecnologia::Engenharia Química |
title_short |
Molecular recognition of tumor-associated antigens by lectins and antibodies |
title_full |
Molecular recognition of tumor-associated antigens by lectins and antibodies |
title_fullStr |
Molecular recognition of tumor-associated antigens by lectins and antibodies |
title_full_unstemmed |
Molecular recognition of tumor-associated antigens by lectins and antibodies |
title_sort |
Molecular recognition of tumor-associated antigens by lectins and antibodies |
author |
Grosso, Ana Sofia de Campos |
author_facet |
Grosso, Ana Sofia de Campos |
author_role |
author |
dc.contributor.none.fl_str_mv |
Marcelo, Filipa RUN |
dc.contributor.author.fl_str_mv |
Grosso, Ana Sofia de Campos |
dc.subject.por.fl_str_mv |
Carbohydrate-protein interactions NMR Spectroscopy Galectins Antibodies GalNAc-transferases Mucin-1 Domínio/Área Científica::Engenharia e Tecnologia::Engenharia Química |
topic |
Carbohydrate-protein interactions NMR Spectroscopy Galectins Antibodies GalNAc-transferases Mucin-1 Domínio/Área Científica::Engenharia e Tecnologia::Engenharia Química |
description |
Every living cell on Earth is covered by glycans. They are inserted in proteins and lipids by a posttranslational modification called glycosylation. Their recognition by specific receptors is translated into distinct biological signals. In cancer cells, a misregulation in expression and/or activity of glycosyltransferases, alters the mechanism of glycosylation, creating new glycan epitopes dubbed tumor-associated carbohydrate antigens (TACAs). These are recognized by various receptors, playing a major role in tumor immune responses and metastasis. To target cancer-associated glycan phenotype is crucial to disentangle the molecular recognition process that involves TACAs recognition and biosynthesis. Therefore, NMR techniques were employed to investigate distinct glycan-protein systems: i) the molecular interactions between a mucin-1 (MUC1) related Tn-glycopeptide mimetic containing a non-natural amino acid and distinct antibodies by saturation transfer-difference (STD-NMR); ii) the molecular interactions between galectin-3 (Gal-3) and TF-antigen (TF-Thr and TF-peptide), by heteronuclear single quantum coherence 1H,15N-HSQC titrations, STD-NMR and line broadening analysis and iii) the glycosylation of MUC1 tandem repeated protein (G1VT3S4APDT8RPAPGS14T15APPAH20)4 by GalNAc-T3 using 1H,15N-HSQC and STD-NMR. In i), the STD-NMR binding experiments show that all antibodies under study recognize the Tn-glycopeptide mimetic and point out structural differences that explain antibodies’ binding preferences. In ii), the 1H,15N-HSQC titrations experiments indicate that Gal-3 binds both TF-derivatives. The dissociation constant KD estimated for both through chemical shift analysis also shows the same range of affinity (275 μM and 413 μM for TF-antigen and TF-peptide, respectively). STD-NMR results demonstrate that the protons from galactose in the TF-moiety govern the recognition process of Gal-3. In iii), the 1H,15N-HSQC experiments of MUC1 in presence of GalNAc-T3 show that the enzyme has preference to glycosylate first the Thr at –GVTS-, followed by the residue Thr at –GSTA-. STD-NMR confirms the cooperative mechanism between the lectin and catalytic domain of GalNAc-T3. |
publishDate |
2017 |
dc.date.none.fl_str_mv |
2017-09 2017-12 2017-09-01T00:00:00Z 2019-10-22T00:30:33Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/masterThesis |
format |
masterThesis |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10362/26262 |
url |
http://hdl.handle.net/10362/26262 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/embargoedAccess |
eu_rights_str_mv |
embargoedAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
|
_version_ |
1799137910411231232 |