Potassium bromate as positive assay control for the Fpg-modified comet assay
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Outros Autores: | , , , , , , , , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.18/7303 |
Resumo: | The comet assay is a popular assay in biomonitoring studies. DNA strand breaks (or unspecific DNA lesions) are measured using the standard comet assay. Oxidative stress-generated DNA lesions can be measured by employing DNA repair enzymes to recognise oxidatively damaged DNA. Unfortunately, there has been a tendency to fail to report results from assay controls (or maybe even not to employ assay controls). We believe this might have been due to uncertainty as to what really constitutes a positive control. It should go without saying that a biomonitoring study cannot have a positive control group as it is unethical to expose healthy humans to DNA damaging (and thus potentially carcinogenic) agents. However, it is possible to include assay controls in the analysis (here meant as a cryopreserved sample of cells i.e. included in each experiment as a reference sample). In the present report we tested potassium bromate (KBrO3) as a positive comet assay control for the formamidopyrimidine DNA glycosylase (Fpg)-modified comet assay. Ten laboratories used the same procedure for treatment of monocytic THP-1 cells with KBrO3 (0.5, 1.5 and 4.5 mM for 1 h at 37°C) and subsequent cryopreservation. Results from one laboratory were excluded in the statistical analysis because of technical issues in the Fpg-modified comet assay. All other laboratories found a concentration-response relationship in cryopreserved samples (regression coefficients from 0.80 to 0.98), although with different slopes ranging from 1.25 to 11.9 Fpg-sensitive sites (%DNA in tail) per 1 mM KBrO3. Our results demonstrate that KBrO3 is a suitable positive comet assay control. |
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Potassium bromate as positive assay control for the Fpg-modified comet assayPotassiumBromateComet AssayCryopreservationDNALaboratoryBiological MonitoringPositive ControlTHP-1 cellsGenotoxicidade AmbientalThe comet assay is a popular assay in biomonitoring studies. DNA strand breaks (or unspecific DNA lesions) are measured using the standard comet assay. Oxidative stress-generated DNA lesions can be measured by employing DNA repair enzymes to recognise oxidatively damaged DNA. Unfortunately, there has been a tendency to fail to report results from assay controls (or maybe even not to employ assay controls). We believe this might have been due to uncertainty as to what really constitutes a positive control. It should go without saying that a biomonitoring study cannot have a positive control group as it is unethical to expose healthy humans to DNA damaging (and thus potentially carcinogenic) agents. However, it is possible to include assay controls in the analysis (here meant as a cryopreserved sample of cells i.e. included in each experiment as a reference sample). In the present report we tested potassium bromate (KBrO3) as a positive comet assay control for the formamidopyrimidine DNA glycosylase (Fpg)-modified comet assay. Ten laboratories used the same procedure for treatment of monocytic THP-1 cells with KBrO3 (0.5, 1.5 and 4.5 mM for 1 h at 37°C) and subsequent cryopreservation. Results from one laboratory were excluded in the statistical analysis because of technical issues in the Fpg-modified comet assay. All other laboratories found a concentration-response relationship in cryopreserved samples (regression coefficients from 0.80 to 0.98), although with different slopes ranging from 1.25 to 11.9 Fpg-sensitive sites (%DNA in tail) per 1 mM KBrO3. Our results demonstrate that KBrO3 is a suitable positive comet assay control.The authors thank the hCOMET project (COST Action, CA15132) for support. Carla Costa and Solange Costa were supported by grants FCT-SFRH/BPD/96196/2013 and SFRH/BPD/100948/2014, respectivelyOxford University Press/ United Kingdom Environmental Mutagen SocietyRepositório Científico do Instituto Nacional de SaúdeMøller, PeterMuruzabal, DamianBakuradze, TamaraRichling, ElkeBankoglu, Ezgi EyluelStopper, HelgaLangie, Sabine A.S.Azqueta, AmayaJensen, AnnieScavone, FrancescaGiovannelli, LisaWojewódzka, MariaKruszewski, MarcinValdiglesias, VanessaLaffon, BlancaCosta, CarlaCosta, SolangeTeixeira, João PauloMarino, MirkoDel Bo’, CristianRiso, PatriziaShaposhnikov, SergeyCollins, Andrew2021-03-04T11:14:54Z2020-072020-07-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.18/7303engMutagenesis. 2020 Jul;35(4):341-348. Epub 2020 Apr 22. doi: 10.1093/mutage/geaa0110267-835710.1093/mutage/geaa011info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-20T15:42:01Zoai:repositorio.insa.pt:10400.18/7303Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:42:06.218214Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Potassium bromate as positive assay control for the Fpg-modified comet assay |
title |
Potassium bromate as positive assay control for the Fpg-modified comet assay |
spellingShingle |
Potassium bromate as positive assay control for the Fpg-modified comet assay Møller, Peter Potassium Bromate Comet Assay Cryopreservation DNA Laboratory Biological Monitoring Positive Control THP-1 cells Genotoxicidade Ambiental |
title_short |
Potassium bromate as positive assay control for the Fpg-modified comet assay |
title_full |
Potassium bromate as positive assay control for the Fpg-modified comet assay |
title_fullStr |
Potassium bromate as positive assay control for the Fpg-modified comet assay |
title_full_unstemmed |
Potassium bromate as positive assay control for the Fpg-modified comet assay |
title_sort |
Potassium bromate as positive assay control for the Fpg-modified comet assay |
author |
Møller, Peter |
author_facet |
Møller, Peter Muruzabal, Damian Bakuradze, Tamara Richling, Elke Bankoglu, Ezgi Eyluel Stopper, Helga Langie, Sabine A.S. Azqueta, Amaya Jensen, Annie Scavone, Francesca Giovannelli, Lisa Wojewódzka, Maria Kruszewski, Marcin Valdiglesias, Vanessa Laffon, Blanca Costa, Carla Costa, Solange Teixeira, João Paulo Marino, Mirko Del Bo’, Cristian Riso, Patrizia Shaposhnikov, Sergey Collins, Andrew |
author_role |
author |
author2 |
Muruzabal, Damian Bakuradze, Tamara Richling, Elke Bankoglu, Ezgi Eyluel Stopper, Helga Langie, Sabine A.S. Azqueta, Amaya Jensen, Annie Scavone, Francesca Giovannelli, Lisa Wojewódzka, Maria Kruszewski, Marcin Valdiglesias, Vanessa Laffon, Blanca Costa, Carla Costa, Solange Teixeira, João Paulo Marino, Mirko Del Bo’, Cristian Riso, Patrizia Shaposhnikov, Sergey Collins, Andrew |
author2_role |
author author author author author author author author author author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Repositório Científico do Instituto Nacional de Saúde |
dc.contributor.author.fl_str_mv |
Møller, Peter Muruzabal, Damian Bakuradze, Tamara Richling, Elke Bankoglu, Ezgi Eyluel Stopper, Helga Langie, Sabine A.S. Azqueta, Amaya Jensen, Annie Scavone, Francesca Giovannelli, Lisa Wojewódzka, Maria Kruszewski, Marcin Valdiglesias, Vanessa Laffon, Blanca Costa, Carla Costa, Solange Teixeira, João Paulo Marino, Mirko Del Bo’, Cristian Riso, Patrizia Shaposhnikov, Sergey Collins, Andrew |
dc.subject.por.fl_str_mv |
Potassium Bromate Comet Assay Cryopreservation DNA Laboratory Biological Monitoring Positive Control THP-1 cells Genotoxicidade Ambiental |
topic |
Potassium Bromate Comet Assay Cryopreservation DNA Laboratory Biological Monitoring Positive Control THP-1 cells Genotoxicidade Ambiental |
description |
The comet assay is a popular assay in biomonitoring studies. DNA strand breaks (or unspecific DNA lesions) are measured using the standard comet assay. Oxidative stress-generated DNA lesions can be measured by employing DNA repair enzymes to recognise oxidatively damaged DNA. Unfortunately, there has been a tendency to fail to report results from assay controls (or maybe even not to employ assay controls). We believe this might have been due to uncertainty as to what really constitutes a positive control. It should go without saying that a biomonitoring study cannot have a positive control group as it is unethical to expose healthy humans to DNA damaging (and thus potentially carcinogenic) agents. However, it is possible to include assay controls in the analysis (here meant as a cryopreserved sample of cells i.e. included in each experiment as a reference sample). In the present report we tested potassium bromate (KBrO3) as a positive comet assay control for the formamidopyrimidine DNA glycosylase (Fpg)-modified comet assay. Ten laboratories used the same procedure for treatment of monocytic THP-1 cells with KBrO3 (0.5, 1.5 and 4.5 mM for 1 h at 37°C) and subsequent cryopreservation. Results from one laboratory were excluded in the statistical analysis because of technical issues in the Fpg-modified comet assay. All other laboratories found a concentration-response relationship in cryopreserved samples (regression coefficients from 0.80 to 0.98), although with different slopes ranging from 1.25 to 11.9 Fpg-sensitive sites (%DNA in tail) per 1 mM KBrO3. Our results demonstrate that KBrO3 is a suitable positive comet assay control. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-07 2020-07-01T00:00:00Z 2021-03-04T11:14:54Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.18/7303 |
url |
http://hdl.handle.net/10400.18/7303 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Mutagenesis. 2020 Jul;35(4):341-348. Epub 2020 Apr 22. doi: 10.1093/mutage/geaa011 0267-8357 10.1093/mutage/geaa011 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Oxford University Press/ United Kingdom Environmental Mutagen Society |
publisher.none.fl_str_mv |
Oxford University Press/ United Kingdom Environmental Mutagen Society |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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RCAAP |
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RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
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1799132166300368896 |