Evidence of Natural Hybridization in Brazilian Wild Lineages of Saccharomyces cerevisiae

Detalhes bibliográficos
Autor(a) principal: Barbosa, Raquel
Data de Publicação: 2016
Outros Autores: Almeida, Pedro, Safar, Silvana V. B., Santos, Renata Oliveira, Morais, Paula B., Nielly-Thibault, Lou, Leducq, Jean Baptiste, Landry, Christian R., Gonçalves, Paula Maria Theriaga Mendes Bernardo, Rosa, Carlos A., Sampaio, Jose Paulo
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10362/24001
Resumo: This work was supported by Fundacao para a Ciencia e a Tecnologia, Portugal, grants PTDC/BIA-EVF/118618/2010 (J.P.S., P.A., P.G.), PTDC/AGR-ALI/118590/2010 (J.P.S., P.A., P.G., R.B.), UID/Multi/04378/2013 (J.P.S., P.G.), and SFRH/BD/77390/2011 (P.A.), by Conselho Nacional de Desenvolvimento Cientifico e Tecnologico-CNPq (CAR, process numbers 560715/2010-2 and 457499/2014-1, PBM process number 457443/2012-0) and Fundacao de Amparo a Pesquisa de Minas Gerais FAPEMIG and VALE S.A (CAR, process number RCP-00094-10). Work of C.R.L. on this project was supported by a NSERC Discovery grant. C.R.L. holds the Canada Research Chair in Evolutionary Cell and Systems Biology. The authors thank Dr. Siu Mui Tsai, Universidade de Sao Paulo, Brazil, for making available strain UFMG-CM-Y640.
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spelling Evidence of Natural Hybridization in Brazilian Wild Lineages of Saccharomyces cerevisiaePOPULATION-STRUCTUREEVOLUTIONARY GENETICSMAXIMUM-LIKELIHOODSEQUENCE DIVERSITYYEASTPARADOXUSDOMESTICATIONGENOMESTRAINSENVIRONMENTSThis work was supported by Fundacao para a Ciencia e a Tecnologia, Portugal, grants PTDC/BIA-EVF/118618/2010 (J.P.S., P.A., P.G.), PTDC/AGR-ALI/118590/2010 (J.P.S., P.A., P.G., R.B.), UID/Multi/04378/2013 (J.P.S., P.G.), and SFRH/BD/77390/2011 (P.A.), by Conselho Nacional de Desenvolvimento Cientifico e Tecnologico-CNPq (CAR, process numbers 560715/2010-2 and 457499/2014-1, PBM process number 457443/2012-0) and Fundacao de Amparo a Pesquisa de Minas Gerais FAPEMIG and VALE S.A (CAR, process number RCP-00094-10). Work of C.R.L. on this project was supported by a NSERC Discovery grant. C.R.L. holds the Canada Research Chair in Evolutionary Cell and Systems Biology. The authors thank Dr. Siu Mui Tsai, Universidade de Sao Paulo, Brazil, for making available strain UFMG-CM-Y640.The natural biology of Saccharomyces cerevisiae, the best known unicellular model eukaryote, remains poorly documented and understood although recent progress has started to change this situation. Studies carried out recently in the Northern Hemisphere revealed the existence of wild populations associated with oak trees in North America, Asia, and in the Mediterranean region. However, in spite of these advances, the global distribution of natural populations of S. cerevisiae, especially in regions were oaks and other members of the Fagaceae are absent, is not well understood. Here we investigate the occurrence of S. cerevisiae in Brazil, atropical region where oaks and other Fagaceae are absent. We report a candidate natural habitat of S. cerevisiae in South America and, using whole-genome data, we uncover new lineages that appear to have as closest relatives the wild populations found in North America and Japan. A population structure analysis revealed the penetration of the wine genotype into the wild Brazilian population, a first observation of the impact of domesticated microbe lineages on the genetic structure of wild populations. Unexpectedly, the Brazilian population shows conspicuous evidence of hybridization with an American population of Saccharomyces paradoxus. Introgressions from S. paradoxus were significantly enriched in genes encoding secondary active transmembrane transporters. We hypothesize that hybridization in tropical wild lineages may have facilitated the habitat transition accompanying the colonization of the tropical ecosystem.DCV - Departamento de Ciências da VidaUCIBIO - Applied Molecular Biosciences UnitRUNBarbosa, RaquelAlmeida, PedroSafar, Silvana V. B.Santos, Renata OliveiraMorais, Paula B.Nielly-Thibault, LouLeducq, Jean BaptisteLandry, Christian R.Gonçalves, Paula Maria Theriaga Mendes BernardoRosa, Carlos A.Sampaio, Jose Paulo2017-10-09T22:01:49Z2016-022016-02-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article13application/pdfhttp://hdl.handle.net/10362/24001engPURE: 2506952https://doi.org/10.1093/gbe/evv263info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-03-11T04:12:22Zoai:run.unl.pt:10362/24001Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T03:27:56.951506Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Evidence of Natural Hybridization in Brazilian Wild Lineages of Saccharomyces cerevisiae
title Evidence of Natural Hybridization in Brazilian Wild Lineages of Saccharomyces cerevisiae
spellingShingle Evidence of Natural Hybridization in Brazilian Wild Lineages of Saccharomyces cerevisiae
Barbosa, Raquel
POPULATION-STRUCTURE
EVOLUTIONARY GENETICS
MAXIMUM-LIKELIHOOD
SEQUENCE DIVERSITY
YEAST
PARADOXUS
DOMESTICATION
GENOME
STRAINS
ENVIRONMENTS
title_short Evidence of Natural Hybridization in Brazilian Wild Lineages of Saccharomyces cerevisiae
title_full Evidence of Natural Hybridization in Brazilian Wild Lineages of Saccharomyces cerevisiae
title_fullStr Evidence of Natural Hybridization in Brazilian Wild Lineages of Saccharomyces cerevisiae
title_full_unstemmed Evidence of Natural Hybridization in Brazilian Wild Lineages of Saccharomyces cerevisiae
title_sort Evidence of Natural Hybridization in Brazilian Wild Lineages of Saccharomyces cerevisiae
author Barbosa, Raquel
author_facet Barbosa, Raquel
Almeida, Pedro
Safar, Silvana V. B.
Santos, Renata Oliveira
Morais, Paula B.
Nielly-Thibault, Lou
Leducq, Jean Baptiste
Landry, Christian R.
Gonçalves, Paula Maria Theriaga Mendes Bernardo
Rosa, Carlos A.
Sampaio, Jose Paulo
author_role author
author2 Almeida, Pedro
Safar, Silvana V. B.
Santos, Renata Oliveira
Morais, Paula B.
Nielly-Thibault, Lou
Leducq, Jean Baptiste
Landry, Christian R.
Gonçalves, Paula Maria Theriaga Mendes Bernardo
Rosa, Carlos A.
Sampaio, Jose Paulo
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv DCV - Departamento de Ciências da Vida
UCIBIO - Applied Molecular Biosciences Unit
RUN
dc.contributor.author.fl_str_mv Barbosa, Raquel
Almeida, Pedro
Safar, Silvana V. B.
Santos, Renata Oliveira
Morais, Paula B.
Nielly-Thibault, Lou
Leducq, Jean Baptiste
Landry, Christian R.
Gonçalves, Paula Maria Theriaga Mendes Bernardo
Rosa, Carlos A.
Sampaio, Jose Paulo
dc.subject.por.fl_str_mv POPULATION-STRUCTURE
EVOLUTIONARY GENETICS
MAXIMUM-LIKELIHOOD
SEQUENCE DIVERSITY
YEAST
PARADOXUS
DOMESTICATION
GENOME
STRAINS
ENVIRONMENTS
topic POPULATION-STRUCTURE
EVOLUTIONARY GENETICS
MAXIMUM-LIKELIHOOD
SEQUENCE DIVERSITY
YEAST
PARADOXUS
DOMESTICATION
GENOME
STRAINS
ENVIRONMENTS
description This work was supported by Fundacao para a Ciencia e a Tecnologia, Portugal, grants PTDC/BIA-EVF/118618/2010 (J.P.S., P.A., P.G.), PTDC/AGR-ALI/118590/2010 (J.P.S., P.A., P.G., R.B.), UID/Multi/04378/2013 (J.P.S., P.G.), and SFRH/BD/77390/2011 (P.A.), by Conselho Nacional de Desenvolvimento Cientifico e Tecnologico-CNPq (CAR, process numbers 560715/2010-2 and 457499/2014-1, PBM process number 457443/2012-0) and Fundacao de Amparo a Pesquisa de Minas Gerais FAPEMIG and VALE S.A (CAR, process number RCP-00094-10). Work of C.R.L. on this project was supported by a NSERC Discovery grant. C.R.L. holds the Canada Research Chair in Evolutionary Cell and Systems Biology. The authors thank Dr. Siu Mui Tsai, Universidade de Sao Paulo, Brazil, for making available strain UFMG-CM-Y640.
publishDate 2016
dc.date.none.fl_str_mv 2016-02
2016-02-01T00:00:00Z
2017-10-09T22:01:49Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10362/24001
url http://hdl.handle.net/10362/24001
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv PURE: 2506952
https://doi.org/10.1093/gbe/evv263
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 13
application/pdf
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
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