Molecular typing of Portuguese clinical isolates of Salmonella spp., S. Enteritidis and S. Typhimurium
Autor(a) principal: | |
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Data de Publicação: | 2012 |
Tipo de documento: | Dissertação |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.14/10512 |
Resumo: | Salmonella spp. is an important pathogen associated with human disease. It remains one of the major causes of food-borne outbreaks all over the world. In Europe two serovars are at the top of the list in number of cases per year, Enteritidis and Typhimurium. Salmonellosis is usually a self-limiting diarrheal disease requiring little or no medical intervention. However, in cases of invasive disease or infections with added complications, antimicrobial treatment may be required. Resistance to antimicrobials has been an increasing problem worldwide. Salmonella enterica from a variety of food and animal sources has been extensively characterized in terms of resistance phenotypes and numerous serotypes revealed multiple antimicrobial resistance determinants (strains resistant to two or more antimicrobials). In Europe the ECDC (European Center of Disease Control) has been in charge of the international surveillance network for human gastrointestinal infections since 2007. In Portugal the INSA (Instituto Nacional de Saúde Dr Ricardo Jorge) was the designated reference laboratory to report the epidemiological data, and though an effort was made still the actual data is not available or clearly reported. In this study 216 clinical Salmonella isolates, from Hospital de São João in Oporto (HSJ) and Hospital de São Marcos in Braga (HSM) both from the Northern region of Portugal, were tested for antimicrobial resistance and by PFGE analysis, as implemented by the CDC in the USA. The sample contained Salmonella Enteritidis, Salmonella Typhimurium and Salmonella spp. The antimicrobial susceptibility analysis to a panel of antimicrobials has confirmed European tendencies, low resistance in S. Enteritidis isolates except for nalidixic acid, and high resistance in S. Typhimurium isolates to most of the tested antimicrobials. Some of the S. Typhimurium isolates tested in this study were also tested in previous works in the lab for sulphonamides resistance and proved to have the typical DT104 resistance profile (ACSSuT). The PFGE analysis allowed the differentiation of Enteritidis and Typhimurium isolates as well as the identification of the serotype for most isolated identified has Salmonella spp. One Salmonella spp. Isolate didn’t belong to any of the two serotypes. The samples from the two hospitals showed high similarity between themselves. The discrimination of Enteritidis isolates was insufficient using XbaI enzyme leading to the conclusion that it would benefit with the analysis using a different panel of enzymes. Typhimurium isolates were well discriminated with PFGE though no correlation was possible with the resistance profile or the isolates available information. |
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Molecular typing of Portuguese clinical isolates of Salmonella spp., S. Enteritidis and S. TyphimuriumTipagem molecular de isolados clínicos portugueses de Salmonella spp., S. Enteritidis e S. TyphimuriumDomínio/Área Científica::Ciências Agrárias::Biotecnologia Agrária e AlimentarSalmonella spp. is an important pathogen associated with human disease. It remains one of the major causes of food-borne outbreaks all over the world. In Europe two serovars are at the top of the list in number of cases per year, Enteritidis and Typhimurium. Salmonellosis is usually a self-limiting diarrheal disease requiring little or no medical intervention. However, in cases of invasive disease or infections with added complications, antimicrobial treatment may be required. Resistance to antimicrobials has been an increasing problem worldwide. Salmonella enterica from a variety of food and animal sources has been extensively characterized in terms of resistance phenotypes and numerous serotypes revealed multiple antimicrobial resistance determinants (strains resistant to two or more antimicrobials). In Europe the ECDC (European Center of Disease Control) has been in charge of the international surveillance network for human gastrointestinal infections since 2007. In Portugal the INSA (Instituto Nacional de Saúde Dr Ricardo Jorge) was the designated reference laboratory to report the epidemiological data, and though an effort was made still the actual data is not available or clearly reported. In this study 216 clinical Salmonella isolates, from Hospital de São João in Oporto (HSJ) and Hospital de São Marcos in Braga (HSM) both from the Northern region of Portugal, were tested for antimicrobial resistance and by PFGE analysis, as implemented by the CDC in the USA. The sample contained Salmonella Enteritidis, Salmonella Typhimurium and Salmonella spp. The antimicrobial susceptibility analysis to a panel of antimicrobials has confirmed European tendencies, low resistance in S. Enteritidis isolates except for nalidixic acid, and high resistance in S. Typhimurium isolates to most of the tested antimicrobials. Some of the S. Typhimurium isolates tested in this study were also tested in previous works in the lab for sulphonamides resistance and proved to have the typical DT104 resistance profile (ACSSuT). The PFGE analysis allowed the differentiation of Enteritidis and Typhimurium isolates as well as the identification of the serotype for most isolated identified has Salmonella spp. One Salmonella spp. Isolate didn’t belong to any of the two serotypes. The samples from the two hospitals showed high similarity between themselves. The discrimination of Enteritidis isolates was insufficient using XbaI enzyme leading to the conclusion that it would benefit with the analysis using a different panel of enzymes. Typhimurium isolates were well discriminated with PFGE though no correlation was possible with the resistance profile or the isolates available information.A Salmonella spp. é um importante patogénico associado a doença humana. Permanece uma das maiores causas de surtos de origem alimentar em todo o mundo. Na Europa, dois serotipos permanecem no topo da lista de número de casos por ano, Enteritidis e Typhimurium. A salmonelose é usualmente uma doença manifestada por diarreia e que dispensa tratamento médico, embora a terapia com antibióticos seja necessária em casos de doença invasiva ou infeções com complicações associadas. A resistência a antibióticos tem sido um problema crescente mundialmente. Salmonella enterica proveniente de uma variedade de alimentos e animais, tem sido extensamente estudada e caracterizada quanto a fenótipos de resistência e vários serotipos revelaram resistência a múltiplos antibióticos. Na Europa, o ECDC (European Center of Disease Control) é o responsável, desde 2007, pela rede de vigilância de infeções gastrointestinais humanas. Em Portugal o INSA (Instituto Nacional de Saúde Dr. Ricardo Jorge) foi designado como laboratório de referência para fornecer dados epidemiológicos ao ECDC. Neste estudo 216 isolados clínicos de Salmonella, provenientes do Hospital de São João no Porto (HSJ) e Hospital de São Marcos em Braga (HSM) ambos na região Norte de Portugal, foram testados quanto à resistência a antibióticos e analisados por PFGE, como implementado pelo CDC nos Estados Unidos. A amostra é constituída por isolados de S. Enteritidis e S. Typhimurium, assim como isolados identificados como Salmonella spp.. A análise de suscetibilidade a antibióticos confirmou as tendências Europeias, baixa resistência de isolados de S. Enteritidis exceto ao ácido nalidíxico, e elevada resistência em isolados de S. Typhimurium à maioria dos antibióticos testados. Alguns dos isolados de S. Typhimurium testados neste estudo também foram testados em trabalhos prévios no laboratório quanto a resistência a sulfonamidas, a maioria mostrou ter um perfil de resistência típico da Salmonella DT104 (ACSSuTe). A análise de PFGE dos isolados permitiu a diferenciação de Enteritidis e Typhimurium assim como a identificação do serotipo para a maior parte dos isolados identificados como Salmonella spp. Um isolado de Salmonella spp. não pertence a nenhum dos outros serotipos. . As amostras provenientes dos dois hospitais têm uma similaridade elevada entre si. A discriminação dos isolados de Enteritidis provou ser baixa usando o enzima XbaI levando à conclusão de que um painel diferente de enzimas poderia ajudar. Os isolados de Typhimurium foram bem discriminados pelo PFGE porém não foi possível relacionar essa discriminação quer com a resistência a antibióticos quer com a informação disponível dos isolados.Teixeira, PaulaSilva, JoanaVeritati - Repositório Institucional da Universidade Católica PortuguesaRamos, Diana Luísa Campos Ferreira2013-05-15T10:04:15Z201220122012-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttp://hdl.handle.net/10400.14/10512enginfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-09-12T01:36:07Zoai:repositorio.ucp.pt:10400.14/10512Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:09:18.674941Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Molecular typing of Portuguese clinical isolates of Salmonella spp., S. Enteritidis and S. Typhimurium Tipagem molecular de isolados clínicos portugueses de Salmonella spp., S. Enteritidis e S. Typhimurium |
title |
Molecular typing of Portuguese clinical isolates of Salmonella spp., S. Enteritidis and S. Typhimurium |
spellingShingle |
Molecular typing of Portuguese clinical isolates of Salmonella spp., S. Enteritidis and S. Typhimurium Ramos, Diana Luísa Campos Ferreira Domínio/Área Científica::Ciências Agrárias::Biotecnologia Agrária e Alimentar |
title_short |
Molecular typing of Portuguese clinical isolates of Salmonella spp., S. Enteritidis and S. Typhimurium |
title_full |
Molecular typing of Portuguese clinical isolates of Salmonella spp., S. Enteritidis and S. Typhimurium |
title_fullStr |
Molecular typing of Portuguese clinical isolates of Salmonella spp., S. Enteritidis and S. Typhimurium |
title_full_unstemmed |
Molecular typing of Portuguese clinical isolates of Salmonella spp., S. Enteritidis and S. Typhimurium |
title_sort |
Molecular typing of Portuguese clinical isolates of Salmonella spp., S. Enteritidis and S. Typhimurium |
author |
Ramos, Diana Luísa Campos Ferreira |
author_facet |
Ramos, Diana Luísa Campos Ferreira |
author_role |
author |
dc.contributor.none.fl_str_mv |
Teixeira, Paula Silva, Joana Veritati - Repositório Institucional da Universidade Católica Portuguesa |
dc.contributor.author.fl_str_mv |
Ramos, Diana Luísa Campos Ferreira |
dc.subject.por.fl_str_mv |
Domínio/Área Científica::Ciências Agrárias::Biotecnologia Agrária e Alimentar |
topic |
Domínio/Área Científica::Ciências Agrárias::Biotecnologia Agrária e Alimentar |
description |
Salmonella spp. is an important pathogen associated with human disease. It remains one of the major causes of food-borne outbreaks all over the world. In Europe two serovars are at the top of the list in number of cases per year, Enteritidis and Typhimurium. Salmonellosis is usually a self-limiting diarrheal disease requiring little or no medical intervention. However, in cases of invasive disease or infections with added complications, antimicrobial treatment may be required. Resistance to antimicrobials has been an increasing problem worldwide. Salmonella enterica from a variety of food and animal sources has been extensively characterized in terms of resistance phenotypes and numerous serotypes revealed multiple antimicrobial resistance determinants (strains resistant to two or more antimicrobials). In Europe the ECDC (European Center of Disease Control) has been in charge of the international surveillance network for human gastrointestinal infections since 2007. In Portugal the INSA (Instituto Nacional de Saúde Dr Ricardo Jorge) was the designated reference laboratory to report the epidemiological data, and though an effort was made still the actual data is not available or clearly reported. In this study 216 clinical Salmonella isolates, from Hospital de São João in Oporto (HSJ) and Hospital de São Marcos in Braga (HSM) both from the Northern region of Portugal, were tested for antimicrobial resistance and by PFGE analysis, as implemented by the CDC in the USA. The sample contained Salmonella Enteritidis, Salmonella Typhimurium and Salmonella spp. The antimicrobial susceptibility analysis to a panel of antimicrobials has confirmed European tendencies, low resistance in S. Enteritidis isolates except for nalidixic acid, and high resistance in S. Typhimurium isolates to most of the tested antimicrobials. Some of the S. Typhimurium isolates tested in this study were also tested in previous works in the lab for sulphonamides resistance and proved to have the typical DT104 resistance profile (ACSSuT). The PFGE analysis allowed the differentiation of Enteritidis and Typhimurium isolates as well as the identification of the serotype for most isolated identified has Salmonella spp. One Salmonella spp. Isolate didn’t belong to any of the two serotypes. The samples from the two hospitals showed high similarity between themselves. The discrimination of Enteritidis isolates was insufficient using XbaI enzyme leading to the conclusion that it would benefit with the analysis using a different panel of enzymes. Typhimurium isolates were well discriminated with PFGE though no correlation was possible with the resistance profile or the isolates available information. |
publishDate |
2012 |
dc.date.none.fl_str_mv |
2012 2012 2012-01-01T00:00:00Z 2013-05-15T10:04:15Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/masterThesis |
format |
masterThesis |
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http://hdl.handle.net/10400.14/10512 |
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eng |
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eng |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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RCAAP |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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