Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysis

Detalhes bibliográficos
Autor(a) principal: Visser, Michael
Data de Publicação: 2016
Outros Autores: Pieterse, Mervin M., Pinkse, Martijn W. H., Nijsse, Bart, Verhaert, Peter D. E. M., Vos, Willem M. de, Schaap, Peter J., Stams, Alfons Johannes Maria
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/1822/42680
Resumo: The Sporomusa genus comprises anaerobic spore-forming acetogenic bacteria that stain Gram-negative. Sporomusa species typically grow with one-carbon substrates and N-methylated compounds. In the degradation of these compounds methyltransferases are involved. In addition, Sporomusa species can grow autotrophically with H2 and CO2, and use a variety of sugars for acetogenic growth. Here we describe a genome analysis of Sporomusa strain An4 and a proteome analysis of cells grown under five different conditions. Comparison of the genomes of Sporomusa strain An4 and Sporomusa ovata strain H1 indicated that An4 is a S. ovata strain. Proteome analysis showed a high abundance of several methyltransferases, predominantly trimethylamine methyltransferases, during growth with betaine, while trimethylamine is one of the main end products of betaine degradation. In methanol degradation methyltransferases are also involved. In methanol utilizing methanogens two methyltransferases catalyze methanol conversion, methyltransferase 1 composed of subunits MtaB and MtaC and methyltransferase 2, also called MtaA. The two methyltransferase 1 subunits MtaB and MtaC were highly abundant when strain An4 was grown with methanol. However, instead of MtaA a methyltetrahydrofolate methyltransferase was synthesized. We propose a novel methanol degradation pathway in Sporomusa strain An4 that uses a methyltetrahydrofolate methyltransferase instead of MtaA
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spelling Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysisScience & TechnologyThe Sporomusa genus comprises anaerobic spore-forming acetogenic bacteria that stain Gram-negative. Sporomusa species typically grow with one-carbon substrates and N-methylated compounds. In the degradation of these compounds methyltransferases are involved. In addition, Sporomusa species can grow autotrophically with H2 and CO2, and use a variety of sugars for acetogenic growth. Here we describe a genome analysis of Sporomusa strain An4 and a proteome analysis of cells grown under five different conditions. Comparison of the genomes of Sporomusa strain An4 and Sporomusa ovata strain H1 indicated that An4 is a S. ovata strain. Proteome analysis showed a high abundance of several methyltransferases, predominantly trimethylamine methyltransferases, during growth with betaine, while trimethylamine is one of the main end products of betaine degradation. In methanol degradation methyltransferases are also involved. In methanol utilizing methanogens two methyltransferases catalyze methanol conversion, methyltransferase 1 composed of subunits MtaB and MtaC and methyltransferase 2, also called MtaA. The two methyltransferase 1 subunits MtaB and MtaC were highly abundant when strain An4 was grown with methanol. However, instead of MtaA a methyltetrahydrofolate methyltransferase was synthesized. We propose a novel methanol degradation pathway in Sporomusa strain An4 that uses a methyltetrahydrofolate methyltransferase instead of MtaAResearch was funded by grants of the Division of Chemical Sciences (CW-TOP 700.55.343) and Earth and Life Sciences (ALW 819.02.014) and the 2008 Spinoza Award of The Netherlands Organisation for Scientific Research (NWO), and of The Netherlands Proteomics Centre embedded in The Netherlands Genomics Initiative. A.J.M. Stams and W.M. de Vos acknowledge the financial support of ERC grants (323009 and 250172) and the Gravitation grant (024.002.002) of the Netherlands Ministry of Education, Culture and Science.Blackwell Publishing Inc.Universidade do MinhoVisser, MichaelPieterse, Mervin M.Pinkse, Martijn W. H.Nijsse, BartVerhaert, Peter D. E. M.Vos, Willem M. deSchaap, Peter J.Stams, Alfons Johannes Maria2016-092016-09-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/42680engVisser, Michael; Pieterse, Mervin M.; Pinkse, Martijn W. H.; Nijsse, Bart; Verhaert, Peter D. E. M.; de Vos, Willem M.; Schaap, Peter J.; Stams, A. J. M., Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysis. Environmental Microbiology, 18(9), 2843-2855, 20161462-29121462-292010.1111/1462-2920.1297326147498http://onlinelibrary.wiley.com/journal/10.1111/(ISSN)1462-2920info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:05:16Zoai:repositorium.sdum.uminho.pt:1822/42680Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:55:40.786029Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysis
title Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysis
spellingShingle Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysis
Visser, Michael
Science & Technology
title_short Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysis
title_full Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysis
title_fullStr Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysis
title_full_unstemmed Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysis
title_sort Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysis
author Visser, Michael
author_facet Visser, Michael
Pieterse, Mervin M.
Pinkse, Martijn W. H.
Nijsse, Bart
Verhaert, Peter D. E. M.
Vos, Willem M. de
Schaap, Peter J.
Stams, Alfons Johannes Maria
author_role author
author2 Pieterse, Mervin M.
Pinkse, Martijn W. H.
Nijsse, Bart
Verhaert, Peter D. E. M.
Vos, Willem M. de
Schaap, Peter J.
Stams, Alfons Johannes Maria
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Visser, Michael
Pieterse, Mervin M.
Pinkse, Martijn W. H.
Nijsse, Bart
Verhaert, Peter D. E. M.
Vos, Willem M. de
Schaap, Peter J.
Stams, Alfons Johannes Maria
dc.subject.por.fl_str_mv Science & Technology
topic Science & Technology
description The Sporomusa genus comprises anaerobic spore-forming acetogenic bacteria that stain Gram-negative. Sporomusa species typically grow with one-carbon substrates and N-methylated compounds. In the degradation of these compounds methyltransferases are involved. In addition, Sporomusa species can grow autotrophically with H2 and CO2, and use a variety of sugars for acetogenic growth. Here we describe a genome analysis of Sporomusa strain An4 and a proteome analysis of cells grown under five different conditions. Comparison of the genomes of Sporomusa strain An4 and Sporomusa ovata strain H1 indicated that An4 is a S. ovata strain. Proteome analysis showed a high abundance of several methyltransferases, predominantly trimethylamine methyltransferases, during growth with betaine, while trimethylamine is one of the main end products of betaine degradation. In methanol degradation methyltransferases are also involved. In methanol utilizing methanogens two methyltransferases catalyze methanol conversion, methyltransferase 1 composed of subunits MtaB and MtaC and methyltransferase 2, also called MtaA. The two methyltransferase 1 subunits MtaB and MtaC were highly abundant when strain An4 was grown with methanol. However, instead of MtaA a methyltetrahydrofolate methyltransferase was synthesized. We propose a novel methanol degradation pathway in Sporomusa strain An4 that uses a methyltetrahydrofolate methyltransferase instead of MtaA
publishDate 2016
dc.date.none.fl_str_mv 2016-09
2016-09-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1822/42680
url http://hdl.handle.net/1822/42680
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Visser, Michael; Pieterse, Mervin M.; Pinkse, Martijn W. H.; Nijsse, Bart; Verhaert, Peter D. E. M.; de Vos, Willem M.; Schaap, Peter J.; Stams, A. J. M., Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysis. Environmental Microbiology, 18(9), 2843-2855, 2016
1462-2912
1462-2920
10.1111/1462-2920.12973
26147498
http://onlinelibrary.wiley.com/journal/10.1111/(ISSN)1462-2920
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Blackwell Publishing Inc.
publisher.none.fl_str_mv Blackwell Publishing Inc.
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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