Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysis
Autor(a) principal: | |
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Data de Publicação: | 2016 |
Outros Autores: | , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/1822/42680 |
Resumo: | The Sporomusa genus comprises anaerobic spore-forming acetogenic bacteria that stain Gram-negative. Sporomusa species typically grow with one-carbon substrates and N-methylated compounds. In the degradation of these compounds methyltransferases are involved. In addition, Sporomusa species can grow autotrophically with H2 and CO2, and use a variety of sugars for acetogenic growth. Here we describe a genome analysis of Sporomusa strain An4 and a proteome analysis of cells grown under five different conditions. Comparison of the genomes of Sporomusa strain An4 and Sporomusa ovata strain H1 indicated that An4 is a S. ovata strain. Proteome analysis showed a high abundance of several methyltransferases, predominantly trimethylamine methyltransferases, during growth with betaine, while trimethylamine is one of the main end products of betaine degradation. In methanol degradation methyltransferases are also involved. In methanol utilizing methanogens two methyltransferases catalyze methanol conversion, methyltransferase 1 composed of subunits MtaB and MtaC and methyltransferase 2, also called MtaA. The two methyltransferase 1 subunits MtaB and MtaC were highly abundant when strain An4 was grown with methanol. However, instead of MtaA a methyltetrahydrofolate methyltransferase was synthesized. We propose a novel methanol degradation pathway in Sporomusa strain An4 that uses a methyltetrahydrofolate methyltransferase instead of MtaA |
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Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysisScience & TechnologyThe Sporomusa genus comprises anaerobic spore-forming acetogenic bacteria that stain Gram-negative. Sporomusa species typically grow with one-carbon substrates and N-methylated compounds. In the degradation of these compounds methyltransferases are involved. In addition, Sporomusa species can grow autotrophically with H2 and CO2, and use a variety of sugars for acetogenic growth. Here we describe a genome analysis of Sporomusa strain An4 and a proteome analysis of cells grown under five different conditions. Comparison of the genomes of Sporomusa strain An4 and Sporomusa ovata strain H1 indicated that An4 is a S. ovata strain. Proteome analysis showed a high abundance of several methyltransferases, predominantly trimethylamine methyltransferases, during growth with betaine, while trimethylamine is one of the main end products of betaine degradation. In methanol degradation methyltransferases are also involved. In methanol utilizing methanogens two methyltransferases catalyze methanol conversion, methyltransferase 1 composed of subunits MtaB and MtaC and methyltransferase 2, also called MtaA. The two methyltransferase 1 subunits MtaB and MtaC were highly abundant when strain An4 was grown with methanol. However, instead of MtaA a methyltetrahydrofolate methyltransferase was synthesized. We propose a novel methanol degradation pathway in Sporomusa strain An4 that uses a methyltetrahydrofolate methyltransferase instead of MtaAResearch was funded by grants of the Division of Chemical Sciences (CW-TOP 700.55.343) and Earth and Life Sciences (ALW 819.02.014) and the 2008 Spinoza Award of The Netherlands Organisation for Scientific Research (NWO), and of The Netherlands Proteomics Centre embedded in The Netherlands Genomics Initiative. A.J.M. Stams and W.M. de Vos acknowledge the financial support of ERC grants (323009 and 250172) and the Gravitation grant (024.002.002) of the Netherlands Ministry of Education, Culture and Science.Blackwell Publishing Inc.Universidade do MinhoVisser, MichaelPieterse, Mervin M.Pinkse, Martijn W. H.Nijsse, BartVerhaert, Peter D. E. M.Vos, Willem M. deSchaap, Peter J.Stams, Alfons Johannes Maria2016-092016-09-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/42680engVisser, Michael; Pieterse, Mervin M.; Pinkse, Martijn W. H.; Nijsse, Bart; Verhaert, Peter D. E. M.; de Vos, Willem M.; Schaap, Peter J.; Stams, A. J. M., Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysis. Environmental Microbiology, 18(9), 2843-2855, 20161462-29121462-292010.1111/1462-2920.1297326147498http://onlinelibrary.wiley.com/journal/10.1111/(ISSN)1462-2920info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:05:16Zoai:repositorium.sdum.uminho.pt:1822/42680Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:55:40.786029Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysis |
title |
Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysis |
spellingShingle |
Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysis Visser, Michael Science & Technology |
title_short |
Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysis |
title_full |
Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysis |
title_fullStr |
Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysis |
title_full_unstemmed |
Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysis |
title_sort |
Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysis |
author |
Visser, Michael |
author_facet |
Visser, Michael Pieterse, Mervin M. Pinkse, Martijn W. H. Nijsse, Bart Verhaert, Peter D. E. M. Vos, Willem M. de Schaap, Peter J. Stams, Alfons Johannes Maria |
author_role |
author |
author2 |
Pieterse, Mervin M. Pinkse, Martijn W. H. Nijsse, Bart Verhaert, Peter D. E. M. Vos, Willem M. de Schaap, Peter J. Stams, Alfons Johannes Maria |
author2_role |
author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade do Minho |
dc.contributor.author.fl_str_mv |
Visser, Michael Pieterse, Mervin M. Pinkse, Martijn W. H. Nijsse, Bart Verhaert, Peter D. E. M. Vos, Willem M. de Schaap, Peter J. Stams, Alfons Johannes Maria |
dc.subject.por.fl_str_mv |
Science & Technology |
topic |
Science & Technology |
description |
The Sporomusa genus comprises anaerobic spore-forming acetogenic bacteria that stain Gram-negative. Sporomusa species typically grow with one-carbon substrates and N-methylated compounds. In the degradation of these compounds methyltransferases are involved. In addition, Sporomusa species can grow autotrophically with H2 and CO2, and use a variety of sugars for acetogenic growth. Here we describe a genome analysis of Sporomusa strain An4 and a proteome analysis of cells grown under five different conditions. Comparison of the genomes of Sporomusa strain An4 and Sporomusa ovata strain H1 indicated that An4 is a S. ovata strain. Proteome analysis showed a high abundance of several methyltransferases, predominantly trimethylamine methyltransferases, during growth with betaine, while trimethylamine is one of the main end products of betaine degradation. In methanol degradation methyltransferases are also involved. In methanol utilizing methanogens two methyltransferases catalyze methanol conversion, methyltransferase 1 composed of subunits MtaB and MtaC and methyltransferase 2, also called MtaA. The two methyltransferase 1 subunits MtaB and MtaC were highly abundant when strain An4 was grown with methanol. However, instead of MtaA a methyltetrahydrofolate methyltransferase was synthesized. We propose a novel methanol degradation pathway in Sporomusa strain An4 that uses a methyltetrahydrofolate methyltransferase instead of MtaA |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-09 2016-09-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/1822/42680 |
url |
http://hdl.handle.net/1822/42680 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Visser, Michael; Pieterse, Mervin M.; Pinkse, Martijn W. H.; Nijsse, Bart; Verhaert, Peter D. E. M.; de Vos, Willem M.; Schaap, Peter J.; Stams, A. J. M., Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysis. Environmental Microbiology, 18(9), 2843-2855, 2016 1462-2912 1462-2920 10.1111/1462-2920.12973 26147498 http://onlinelibrary.wiley.com/journal/10.1111/(ISSN)1462-2920 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Blackwell Publishing Inc. |
publisher.none.fl_str_mv |
Blackwell Publishing Inc. |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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RCAAP |
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RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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