Mosaic maternal ancestry in the Great Lakes region of East Africa

Detalhes bibliográficos
Autor(a) principal: Gomes, Verónica
Data de Publicação: 2015
Outros Autores: Pala, Maria, Salas, Antonio, Álvarez‑Iglesias, Vanesa, Amorim, António, Gómez‑Carballa, Alberto, Carracedo, Ángel, Clarke, Douglas J., Hill, Catherine, Mormina, Maru, Shaw, Marie‑Anne, Dunne, David W., Pereira, Rui, Pereira, Vânia, Prata, Maria João, Sánchez‑Diz, Paula, Rito, Teresa, Soares, Pedro, Gusmão, Leonor, Richards, Martin B.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/1822/40070
Resumo: The Great Lakes lie within a region of East Africa with very high human genetic diversity, home of many ethno-linguistic groups usually assumed to be the product of a small number of major dispersals. However, our knowledge of these dispersals relies primarily on the inferences of historical, linguistics and oral traditions, with attempts to match up the archaeological evidence where possible. This is an obvious area to which archaeogenetics can contribute, yet Uganda, at the heart of these developments, has not been studied for mitochondrial DNA (mtDNA) variation. Here, we compare mtDNA lineages at this putative genetic crossroads across 409 representatives of the major language groups: Bantu speakers and Eastern and Western Nilotic speakers. We show that Uganda harbours one of the highest mtDNA diversities within and between linguistic groups, with the various groups significantly differentiated from each other. Despite an inferred linguistic origin in South Sudan, the data from the two Nilotic-speaking groups point to a much more complex history, involving not only possible dispersals from Sudan and the Horn but also large-scale assimilation of autochthonous lineages within East Africa and even Uganda itself. The Eastern Nilotic group also carries signals characteristic of West-Central Africa, primarily due to Bantu influence, whereas a much stronger signal in the Western Nilotic group suggests direct West-Central African ancestry. Bantu speakers share lineages with both Nilotic groups, and also harbour East African lineages not found in Western Nilotic speakers, likely due to assimilating indigenous populations since arriving in the region ~3000 years ago.
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spelling Mosaic maternal ancestry in the Great Lakes region of East AfricaScience & TechnologyThe Great Lakes lie within a region of East Africa with very high human genetic diversity, home of many ethno-linguistic groups usually assumed to be the product of a small number of major dispersals. However, our knowledge of these dispersals relies primarily on the inferences of historical, linguistics and oral traditions, with attempts to match up the archaeological evidence where possible. This is an obvious area to which archaeogenetics can contribute, yet Uganda, at the heart of these developments, has not been studied for mitochondrial DNA (mtDNA) variation. Here, we compare mtDNA lineages at this putative genetic crossroads across 409 representatives of the major language groups: Bantu speakers and Eastern and Western Nilotic speakers. We show that Uganda harbours one of the highest mtDNA diversities within and between linguistic groups, with the various groups significantly differentiated from each other. Despite an inferred linguistic origin in South Sudan, the data from the two Nilotic-speaking groups point to a much more complex history, involving not only possible dispersals from Sudan and the Horn but also large-scale assimilation of autochthonous lineages within East Africa and even Uganda itself. The Eastern Nilotic group also carries signals characteristic of West-Central Africa, primarily due to Bantu influence, whereas a much stronger signal in the Western Nilotic group suggests direct West-Central African ancestry. Bantu speakers share lineages with both Nilotic groups, and also harbour East African lineages not found in Western Nilotic speakers, likely due to assimilating indigenous populations since arriving in the region ~3000 years ago.This study was supported by Fundacao para a Ciencia e Tecnologia (FCT) and co-financed by the European Social Fund (Human Potential Thematic Operational Programme) through grants SFRH/BPD/76207/2011 (VG) and SFRH/BPD/81986/2011 (RP). PS is supported by FCT, European Social Fund, Programa Operacional Potencial Humano and the FCT Investigator Programme (IF/01641/2013) and acknowledges FCT/MEC for support to CBMA through Portuguese funds (PIDDAC)-PEst-OE/BIA/UI4050/2014. AS is supported by "Ministerio de Ciencia e Innovacion" (SAF2011-26983), the Plan Galego IDT (EM 2012/045) and the grant from the Sistema Universitario Gallego-Modalidad REDES (2012-PG226) from the Xunta de Galicia. IPATIMUP integrates the i3S Research Unit, which is partially supported by FCT, the Portuguese Foundation for Science and Technology. This work is funded by FEDER funds through the Operational Programme for Competitiveness Factors-COMPETE and National Funds through the FCT-Foundation for Science and Technology, under the project "PEst-C/SAU/LA0003/2013". NORTE-07-0162-FEDER-00018-Contributos para o reforco da capacidade do IPATIMUP enquanto actor do sistema regional de inovacao and NORTE-07-0162-FEDER-000067 Reforco e consolidacao da capacidade infraestrutural do IPATIMUP para o sistema regional de inovacao, both supported by Programa Operacional Regional do Norte (ON. 2-O Novo Norte), through FEDER funds under the Quadro de Referencia Estrategico Nacional (QREN). We would like to acknowledge the contribution of Magdalen Awor, Fr. Germano Serra and Iva Gomes for collecting the Karamoja samples. We thank Eric Bridgeland for collecting the Kabale samples, Dr Narcis Kabatereine (Vector Control Division, Uganda Ministry of Health) for the Piida samples, and Abigail Enaburekhan, Sadie Anderson- Mann, Rebecca Cole and Steven Groom for preliminary work on the Kabale and Piida sequences.SpringerUniversidade do MinhoGomes, VerónicaPala, MariaSalas, AntonioÁlvarez‑Iglesias, VanesaAmorim, AntónioGómez‑Carballa, AlbertoCarracedo, ÁngelClarke, Douglas J.Hill, CatherineMormina, MaruShaw, Marie‑AnneDunne, David W.Pereira, RuiPereira, VâniaPrata, Maria JoãoSánchez‑Diz, PaulaRito, TeresaSoares, PedroGusmão, LeonorRichards, Martin B.20152015-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/40070engGomes, V., Pala, M., Salas, A., Alvarez-Iglesias, V., Amorim, A., Gomez-Carballa, A., . . . Richards, M. B. (2015). Mosaic maternal ancestry in the Great Lakes region of East Africa. Human Genetics, 134(9), 1013-1027. doi: 10.1007/s00439-015-1583-00340-671710.1007/s00439-015-1583-026188410http://link.springer.com/journal/439info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:48:02Zoai:repositorium.sdum.uminho.pt:1822/40070Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:46:12.224416Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Mosaic maternal ancestry in the Great Lakes region of East Africa
title Mosaic maternal ancestry in the Great Lakes region of East Africa
spellingShingle Mosaic maternal ancestry in the Great Lakes region of East Africa
Gomes, Verónica
Science & Technology
title_short Mosaic maternal ancestry in the Great Lakes region of East Africa
title_full Mosaic maternal ancestry in the Great Lakes region of East Africa
title_fullStr Mosaic maternal ancestry in the Great Lakes region of East Africa
title_full_unstemmed Mosaic maternal ancestry in the Great Lakes region of East Africa
title_sort Mosaic maternal ancestry in the Great Lakes region of East Africa
author Gomes, Verónica
author_facet Gomes, Verónica
Pala, Maria
Salas, Antonio
Álvarez‑Iglesias, Vanesa
Amorim, António
Gómez‑Carballa, Alberto
Carracedo, Ángel
Clarke, Douglas J.
Hill, Catherine
Mormina, Maru
Shaw, Marie‑Anne
Dunne, David W.
Pereira, Rui
Pereira, Vânia
Prata, Maria João
Sánchez‑Diz, Paula
Rito, Teresa
Soares, Pedro
Gusmão, Leonor
Richards, Martin B.
author_role author
author2 Pala, Maria
Salas, Antonio
Álvarez‑Iglesias, Vanesa
Amorim, António
Gómez‑Carballa, Alberto
Carracedo, Ángel
Clarke, Douglas J.
Hill, Catherine
Mormina, Maru
Shaw, Marie‑Anne
Dunne, David W.
Pereira, Rui
Pereira, Vânia
Prata, Maria João
Sánchez‑Diz, Paula
Rito, Teresa
Soares, Pedro
Gusmão, Leonor
Richards, Martin B.
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Gomes, Verónica
Pala, Maria
Salas, Antonio
Álvarez‑Iglesias, Vanesa
Amorim, António
Gómez‑Carballa, Alberto
Carracedo, Ángel
Clarke, Douglas J.
Hill, Catherine
Mormina, Maru
Shaw, Marie‑Anne
Dunne, David W.
Pereira, Rui
Pereira, Vânia
Prata, Maria João
Sánchez‑Diz, Paula
Rito, Teresa
Soares, Pedro
Gusmão, Leonor
Richards, Martin B.
dc.subject.por.fl_str_mv Science & Technology
topic Science & Technology
description The Great Lakes lie within a region of East Africa with very high human genetic diversity, home of many ethno-linguistic groups usually assumed to be the product of a small number of major dispersals. However, our knowledge of these dispersals relies primarily on the inferences of historical, linguistics and oral traditions, with attempts to match up the archaeological evidence where possible. This is an obvious area to which archaeogenetics can contribute, yet Uganda, at the heart of these developments, has not been studied for mitochondrial DNA (mtDNA) variation. Here, we compare mtDNA lineages at this putative genetic crossroads across 409 representatives of the major language groups: Bantu speakers and Eastern and Western Nilotic speakers. We show that Uganda harbours one of the highest mtDNA diversities within and between linguistic groups, with the various groups significantly differentiated from each other. Despite an inferred linguistic origin in South Sudan, the data from the two Nilotic-speaking groups point to a much more complex history, involving not only possible dispersals from Sudan and the Horn but also large-scale assimilation of autochthonous lineages within East Africa and even Uganda itself. The Eastern Nilotic group also carries signals characteristic of West-Central Africa, primarily due to Bantu influence, whereas a much stronger signal in the Western Nilotic group suggests direct West-Central African ancestry. Bantu speakers share lineages with both Nilotic groups, and also harbour East African lineages not found in Western Nilotic speakers, likely due to assimilating indigenous populations since arriving in the region ~3000 years ago.
publishDate 2015
dc.date.none.fl_str_mv 2015
2015-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1822/40070
url http://hdl.handle.net/1822/40070
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Gomes, V., Pala, M., Salas, A., Alvarez-Iglesias, V., Amorim, A., Gomez-Carballa, A., . . . Richards, M. B. (2015). Mosaic maternal ancestry in the Great Lakes region of East Africa. Human Genetics, 134(9), 1013-1027. doi: 10.1007/s00439-015-1583-0
0340-6717
10.1007/s00439-015-1583-0
26188410
http://link.springer.com/journal/439
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Springer
publisher.none.fl_str_mv Springer
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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