How genomics can help biodiversity conservation
Autor(a) principal: | |
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Data de Publicação: | 2023 |
Outros Autores: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.3/6855 |
Resumo: | ABSTRACT: The availability of public genomic resources can greatly assist biodiversity assessment, conservation, and restoration efforts by providing evidence for scientifically informed management decisions. Here we survey the main approaches and applications in biodiversity and conservation genomics, considering practical factors, such as cost, time, prerequisite skills, and current shortcomings of applications. Most approaches perform best in combination with reference genomes from the target species or closely related species. We review case studies to illustrate how reference genomes can facilitate biodiversity research and conservation across the tree of life. We conclude that the time is ripe to view reference genomes as fundamental resources and to integrate their use as a best practice in conservation genomics. |
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How genomics can help biodiversity conservationBiodiversityGenómicaConservationERGAABSTRACT: The availability of public genomic resources can greatly assist biodiversity assessment, conservation, and restoration efforts by providing evidence for scientifically informed management decisions. Here we survey the main approaches and applications in biodiversity and conservation genomics, considering practical factors, such as cost, time, prerequisite skills, and current shortcomings of applications. Most approaches perform best in combination with reference genomes from the target species or closely related species. We review case studies to illustrate how reference genomes can facilitate biodiversity research and conservation across the tree of life. We conclude that the time is ripe to view reference genomes as fundamental resources and to integrate their use as a best practice in conservation genomics.Cell PressRepositório da Universidade dos AçoresTheissinger, KathrinFernandes, CarlosFormenti, GiulioBista, IlianaBerg, Paul R.Bleidorn, ChristophBombarely, AurelianoCrottini, AngelicaGallo, Guido R.Godoy, José A.Jentoft, SisselMalukiewicz, JoannaMouton, AliceOomen, Rebekah A.Paez, SadyePalsbøll, Per J.Pampoulie, ChristopheRuiz-López, María J.Secomandi, SimonaSvardal, HannesTheofanopoulou, ConstantinaDe Vries, JanWaldvogel, Ann-MarieZhang, GuojieJarvis, Erich D.Bálint, MiklósCIOFI, CLAUDIOWaterhouse, Robert M.Mazzoni, Camila J.Höglund, JacobAghayan, Sargis A.Alioto, TylerAmorim do Rosário, IsabelAmorim do Rosário, IsabelAlvarez, NadirAlves, Paulo C.Amorim do Rosário, IsabelAmorim do Rosário, IsabelAntunes, AgostinhoArribas, PaulaBaldrian, PetrBertorelle, GiorgioBöhne, AstridBonisoli Alquati, AndreaBoštjančić, Ljudevit L.Boussau, BastienBreton, Catherine M.Buzan, ElenaCampos, Paula F.Carreras, CarlosCastro, Luis FilipeChueca, Luis J.Čiampor, FedorConti, ElenaCook-Deegan, RobertCroll, DanielCunha, Mónica V.Delsuc, FrédéricDennis, Alice B.Dimitrov, DimitarFaria, RuiFavre, AdrienFedrigo, Olivier D.Fernández, RosaFicetola, GentileFlot, Jean-FrançoisGabaldón, ToniAgius, Dolores R.Giani, Alice M.Gilbert, M Thomas PGrebenc, TineGuschanski, KaterinaGuyot, RomainHausdorf, BernhardHawlitschek, OliverHeintzman, Peter D.Heinze, BertholdHiller, MichaelHusemann, MartinIannucci, AlessioIrisarri, IkerJakobsen, Kjetill S.Klinga, PeterKloch, AgnieszkaKratochwil, Claudius FKusche, HenrikLayton, Kara K.S.Leonard, Jennifer A.LERAT, EmmanuelleLiti, GianniManousaki, TerezaMarques-Bonet, TomasMatos-Maraví, PávelMatschiner, MichaelMaumus, FlorianMc Cartney, Ann M.Meiri, ShaiMelo-Ferreira, JoséMengual, XimoMonaghan, Michael T.Montagna, MatteoMysłajek, RobertNeiber, Marco T.Nicolas, ViolaineNovo, MartaOzretić, PetarPalero, FerranPârvulescu, LucianPascual, MartaPaulo, Octávio S.Pavlek, MartinaPegueroles, CintaPellissier, LoïcPesole, GrazianoPrimmer, Craig R.Riesgo, AnaRüber, LukasRUBOLINI, DIEGOSalvi, DanieleSeehausen, OleSeidel, MatthiasStuder, BrunoTheodoridis, SpyrosThines, MarcoUrban, LaraVasemägi, AntiVella, AdrianaVella, NoelVernes, Sonja C.Vernesi, CristianoVieites, David R.Wheat, Christopher W.Wörheide, GertWurm, YannickZammit, Gabrielle2024-01-15T14:33:03Z2023-072023-07-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.3/6855engTheissinger, K., Fernandes, C., Formenti, G., Bista, I., Berg, P. R. ... Zammit, G. (2023). How genomics can help biodiversity conservation. "Trends in Genetics", 39(7), 545-559. DOI:10.1016/j.tig.2023.01.005 (IF2022 11,4; Q1 Genetics & Heredity)1362-455510.1016/j.tig.2023.01.005info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-01-20T02:00:53Zoai:repositorio.uac.pt:10400.3/6855Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T01:52:22.194479Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
How genomics can help biodiversity conservation |
title |
How genomics can help biodiversity conservation |
spellingShingle |
How genomics can help biodiversity conservation Theissinger, Kathrin Biodiversity Genómica Conservation ERGA |
title_short |
How genomics can help biodiversity conservation |
title_full |
How genomics can help biodiversity conservation |
title_fullStr |
How genomics can help biodiversity conservation |
title_full_unstemmed |
How genomics can help biodiversity conservation |
title_sort |
How genomics can help biodiversity conservation |
author |
Theissinger, Kathrin |
author_facet |
Theissinger, Kathrin Fernandes, Carlos Formenti, Giulio Bista, Iliana Berg, Paul R. Bleidorn, Christoph Bombarely, Aureliano Crottini, Angelica Gallo, Guido R. Godoy, José A. Jentoft, Sissel Malukiewicz, Joanna Mouton, Alice Oomen, Rebekah A. Paez, Sadye Palsbøll, Per J. Pampoulie, Christophe Ruiz-López, María J. Secomandi, Simona Svardal, Hannes Theofanopoulou, Constantina De Vries, Jan Waldvogel, Ann-Marie Zhang, Guojie Jarvis, Erich D. Bálint, Miklós CIOFI, CLAUDIO Waterhouse, Robert M. Mazzoni, Camila J. Höglund, Jacob Aghayan, Sargis A. Alioto, Tyler Amorim do Rosário, Isabel Alvarez, Nadir Alves, Paulo C. Antunes, Agostinho Arribas, Paula Baldrian, Petr Bertorelle, Giorgio Böhne, Astrid Bonisoli Alquati, Andrea Boštjančić, Ljudevit L. Boussau, Bastien Breton, Catherine M. Buzan, Elena Campos, Paula F. Carreras, Carlos Castro, Luis Filipe Chueca, Luis J. Čiampor, Fedor Conti, Elena Cook-Deegan, Robert Croll, Daniel Cunha, Mónica V. Delsuc, Frédéric Dennis, Alice B. Dimitrov, Dimitar Faria, Rui Favre, Adrien Fedrigo, Olivier D. Fernández, Rosa Ficetola, Gentile Flot, Jean-François Gabaldón, Toni Agius, Dolores R. Giani, Alice M. Gilbert, M Thomas P Grebenc, Tine Guschanski, Katerina Guyot, Romain Hausdorf, Bernhard Hawlitschek, Oliver Heintzman, Peter D. Heinze, Berthold Hiller, Michael Husemann, Martin Iannucci, Alessio Irisarri, Iker Jakobsen, Kjetill S. Klinga, Peter Kloch, Agnieszka Kratochwil, Claudius F Kusche, Henrik Layton, Kara K.S. Leonard, Jennifer A. LERAT, Emmanuelle Liti, Gianni Manousaki, Tereza Marques-Bonet, Tomas Matos-Maraví, Pável Matschiner, Michael Maumus, Florian Mc Cartney, Ann M. Meiri, Shai Melo-Ferreira, José Mengual, Ximo Monaghan, Michael T. Montagna, Matteo Mysłajek, Robert Neiber, Marco T. Nicolas, Violaine Novo, Marta Ozretić, Petar Palero, Ferran Pârvulescu, Lucian Pascual, Marta Paulo, Octávio S. Pavlek, Martina Pegueroles, Cinta Pellissier, Loïc Pesole, Graziano Primmer, Craig R. Riesgo, Ana Rüber, Lukas RUBOLINI, DIEGO Salvi, Daniele Seehausen, Ole Seidel, Matthias Studer, Bruno Theodoridis, Spyros Thines, Marco Urban, Lara Vasemägi, Anti Vella, Adriana Vella, Noel Vernes, Sonja C. Vernesi, Cristiano Vieites, David R. Wheat, Christopher W. Wörheide, Gert Wurm, Yannick Zammit, Gabrielle |
author_role |
author |
author2 |
Fernandes, Carlos Formenti, Giulio Bista, Iliana Berg, Paul R. Bleidorn, Christoph Bombarely, Aureliano Crottini, Angelica Gallo, Guido R. Godoy, José A. Jentoft, Sissel Malukiewicz, Joanna Mouton, Alice Oomen, Rebekah A. Paez, Sadye Palsbøll, Per J. Pampoulie, Christophe Ruiz-López, María J. Secomandi, Simona Svardal, Hannes Theofanopoulou, Constantina De Vries, Jan Waldvogel, Ann-Marie Zhang, Guojie Jarvis, Erich D. Bálint, Miklós CIOFI, CLAUDIO Waterhouse, Robert M. Mazzoni, Camila J. Höglund, Jacob Aghayan, Sargis A. Alioto, Tyler Amorim do Rosário, Isabel Alvarez, Nadir Alves, Paulo C. Antunes, Agostinho Arribas, Paula Baldrian, Petr Bertorelle, Giorgio Böhne, Astrid Bonisoli Alquati, Andrea Boštjančić, Ljudevit L. Boussau, Bastien Breton, Catherine M. Buzan, Elena Campos, Paula F. Carreras, Carlos Castro, Luis Filipe Chueca, Luis J. Čiampor, Fedor Conti, Elena Cook-Deegan, Robert Croll, Daniel Cunha, Mónica V. Delsuc, Frédéric Dennis, Alice B. Dimitrov, Dimitar Faria, Rui Favre, Adrien Fedrigo, Olivier D. Fernández, Rosa Ficetola, Gentile Flot, Jean-François Gabaldón, Toni Agius, Dolores R. Giani, Alice M. Gilbert, M Thomas P Grebenc, Tine Guschanski, Katerina Guyot, Romain Hausdorf, Bernhard Hawlitschek, Oliver Heintzman, Peter D. Heinze, Berthold Hiller, Michael Husemann, Martin Iannucci, Alessio Irisarri, Iker Jakobsen, Kjetill S. Klinga, Peter Kloch, Agnieszka Kratochwil, Claudius F Kusche, Henrik Layton, Kara K.S. Leonard, Jennifer A. LERAT, Emmanuelle Liti, Gianni Manousaki, Tereza Marques-Bonet, Tomas Matos-Maraví, Pável Matschiner, Michael Maumus, Florian Mc Cartney, Ann M. Meiri, Shai Melo-Ferreira, José Mengual, Ximo Monaghan, Michael T. Montagna, Matteo Mysłajek, Robert Neiber, Marco T. Nicolas, Violaine Novo, Marta Ozretić, Petar Palero, Ferran Pârvulescu, Lucian Pascual, Marta Paulo, Octávio S. Pavlek, Martina Pegueroles, Cinta Pellissier, Loïc Pesole, Graziano Primmer, Craig R. Riesgo, Ana Rüber, Lukas RUBOLINI, DIEGO Salvi, Daniele Seehausen, Ole Seidel, Matthias Studer, Bruno Theodoridis, Spyros Thines, Marco Urban, Lara Vasemägi, Anti Vella, Adriana Vella, Noel Vernes, Sonja C. Vernesi, Cristiano Vieites, David R. Wheat, Christopher W. Wörheide, Gert Wurm, Yannick Zammit, Gabrielle |
author2_role |
author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Repositório da Universidade dos Açores |
dc.contributor.author.fl_str_mv |
Theissinger, Kathrin Fernandes, Carlos Formenti, Giulio Bista, Iliana Berg, Paul R. Bleidorn, Christoph Bombarely, Aureliano Crottini, Angelica Gallo, Guido R. Godoy, José A. Jentoft, Sissel Malukiewicz, Joanna Mouton, Alice Oomen, Rebekah A. Paez, Sadye Palsbøll, Per J. Pampoulie, Christophe Ruiz-López, María J. Secomandi, Simona Svardal, Hannes Theofanopoulou, Constantina De Vries, Jan Waldvogel, Ann-Marie Zhang, Guojie Jarvis, Erich D. Bálint, Miklós CIOFI, CLAUDIO Waterhouse, Robert M. Mazzoni, Camila J. Höglund, Jacob Aghayan, Sargis A. Alioto, Tyler Amorim do Rosário, Isabel Amorim do Rosário, Isabel Alvarez, Nadir Alves, Paulo C. Amorim do Rosário, Isabel Amorim do Rosário, Isabel Antunes, Agostinho Arribas, Paula Baldrian, Petr Bertorelle, Giorgio Böhne, Astrid Bonisoli Alquati, Andrea Boštjančić, Ljudevit L. Boussau, Bastien Breton, Catherine M. Buzan, Elena Campos, Paula F. Carreras, Carlos Castro, Luis Filipe Chueca, Luis J. Čiampor, Fedor Conti, Elena Cook-Deegan, Robert Croll, Daniel Cunha, Mónica V. Delsuc, Frédéric Dennis, Alice B. Dimitrov, Dimitar Faria, Rui Favre, Adrien Fedrigo, Olivier D. Fernández, Rosa Ficetola, Gentile Flot, Jean-François Gabaldón, Toni Agius, Dolores R. Giani, Alice M. Gilbert, M Thomas P Grebenc, Tine Guschanski, Katerina Guyot, Romain Hausdorf, Bernhard Hawlitschek, Oliver Heintzman, Peter D. Heinze, Berthold Hiller, Michael Husemann, Martin Iannucci, Alessio Irisarri, Iker Jakobsen, Kjetill S. Klinga, Peter Kloch, Agnieszka Kratochwil, Claudius F Kusche, Henrik Layton, Kara K.S. Leonard, Jennifer A. LERAT, Emmanuelle Liti, Gianni Manousaki, Tereza Marques-Bonet, Tomas Matos-Maraví, Pável Matschiner, Michael Maumus, Florian Mc Cartney, Ann M. Meiri, Shai Melo-Ferreira, José Mengual, Ximo Monaghan, Michael T. Montagna, Matteo Mysłajek, Robert Neiber, Marco T. Nicolas, Violaine Novo, Marta Ozretić, Petar Palero, Ferran Pârvulescu, Lucian Pascual, Marta Paulo, Octávio S. Pavlek, Martina Pegueroles, Cinta Pellissier, Loïc Pesole, Graziano Primmer, Craig R. Riesgo, Ana Rüber, Lukas RUBOLINI, DIEGO Salvi, Daniele Seehausen, Ole Seidel, Matthias Studer, Bruno Theodoridis, Spyros Thines, Marco Urban, Lara Vasemägi, Anti Vella, Adriana Vella, Noel Vernes, Sonja C. Vernesi, Cristiano Vieites, David R. Wheat, Christopher W. Wörheide, Gert Wurm, Yannick Zammit, Gabrielle |
dc.subject.por.fl_str_mv |
Biodiversity Genómica Conservation ERGA |
topic |
Biodiversity Genómica Conservation ERGA |
description |
ABSTRACT: The availability of public genomic resources can greatly assist biodiversity assessment, conservation, and restoration efforts by providing evidence for scientifically informed management decisions. Here we survey the main approaches and applications in biodiversity and conservation genomics, considering practical factors, such as cost, time, prerequisite skills, and current shortcomings of applications. Most approaches perform best in combination with reference genomes from the target species or closely related species. We review case studies to illustrate how reference genomes can facilitate biodiversity research and conservation across the tree of life. We conclude that the time is ripe to view reference genomes as fundamental resources and to integrate their use as a best practice in conservation genomics. |
publishDate |
2023 |
dc.date.none.fl_str_mv |
2023-07 2023-07-01T00:00:00Z 2024-01-15T14:33:03Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.3/6855 |
url |
http://hdl.handle.net/10400.3/6855 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Theissinger, K., Fernandes, C., Formenti, G., Bista, I., Berg, P. R. ... Zammit, G. (2023). How genomics can help biodiversity conservation. "Trends in Genetics", 39(7), 545-559. DOI:10.1016/j.tig.2023.01.005 (IF2022 11,4; Q1 Genetics & Heredity) 1362-4555 10.1016/j.tig.2023.01.005 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Cell Press |
publisher.none.fl_str_mv |
Cell Press |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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RCAAP |
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RCAAP |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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